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% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                xxxx
                                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)
                                                                                 xxxxxxxxxxxxxxxxxxx
                                                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                                          --------->YAB1      xxxxxxxxxxxxxxxx>smallRNA(i)
                                         <---------MYB52(1)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
              <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <---------WOX13(1)   xxxxxxxxxxxxxxxxxxxxxxx
    --------->DAG2                      <-----------HVH21 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxx
   ---------->DOF2              --------->ANAC58      --------->ATHB12xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
--------->CCA1(2)               --------->ANAC46     <---------AHL20(2)   <-----------HVH21  <------
-------->ARR11(3)               --------->ANAC58     <---------YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
---------ARR11(3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
 
aagatataaagttgctatgtagcgatgagagttatacgcagacagtcagttctaatttgattgataaatctatgaagtgtcacatttgccaagaccgcta  6341900
                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                       xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                    <------MYB83
                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                    <------MYB46(1)
                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                             <------ZmHOX2a(1)
                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                           <xxxxxxxxxxxxxxxxxxsmallRNA(si3)
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                      xxxxxxxxxxxxxxxx>smallRNA(i)
                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                    xxxxxxxxxxxxxxxx>smallRNA(i)
                <---------ZAT18 <xxxxxxxxxxxxxxxxsmallRNA(i)
                --------->ZAT14xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
             <xxxxxxxxxxxxxxxxsmallRNA(i)
        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    ---
      xxxxxxxxxxxxxxxx>smallRNA(i) --------->MYB59                                           <------
     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      ----------->GT1              --------
    ------->GAMYBxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->DAG2           --------->AHL20(2)
xxxxxxxxxxxx>smallRNA(s)<------ZmHOX2a(1)          ----------->GT1                   ----------->GT1
xxxx>smallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     ---------->DOF2        --------->DAG2
>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----------->GT1      --------->DAG2    <-------
xxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    ---------->DOF2    <-------
---MYB52(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   --------->ALFIN1----------->GT1  ---------->DOF2
 
gttctaactgtctgcatagtagactcaggacaggaatgtaggttctaactaatgtggagaaataaaaagtagaaaaaaaagcgttgaaaagttaataaaa  6342000
                                                        --------->ATHB12
                                                       <---------YAB1
                                                       --------->ICU4
                                                     --------->CCA1(2)
                                                ---------->DOF2
                                             --------->AHL20(2)                   --------->ANAC58
                                             <---------AHL20(2)                   --------->ANAC58
                                            <---------AHL20(2)                  ---------->DOF2
   --------->YAB1                           --------->AHL20(2)          --------->AHL20(1)
 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------AHL20(2)              <---------AHL20(2)
-------->GT1                           --------->AHL20(2)               --------->AHL20(2)
---AHL20(2)                       --------->AHL20(2)--------->ARR11(1) <---------ATHB51          ---
->AHL20(2)                        <---------AHL20(2)--------->ARR11(3) --------->AHL20(2)        <--
--AHL20(1)            ----------->GT1  <---------AHL20(2)              <---------ATHB12          ---
--AHL20(2)   <---------TOE2(3)   --------->AHL20(2) <---------ARR11(3) <---------AHL20(2)       ----
 
ttgaaataatagatttaagaaatgtctgtaaaaaaaaaaaattttaatttaaaaagatatgattagaaaaacaaataatttgtgaaagcacttaaaaaaa  6342100
                                                                                                <---
                                                                                             <------
                                                                                             -------
                                                        --------->AHL20(2)               --------->AHL20(1)
                                                       --------->AHL20(2)              <---------AHL20(2)
                                                       <---------AHL20(2)              --------->AHL20(2)
                                                   --------->AHL20(2)       <---------AHL20(2) <----
                                                   <---------AHL20(2)   <---------AHL20(2) ---------
                                        <---------AHL20(2)        <-----------GT1      <---------AHL20(1)
                                       --------->AHL20(1)      --------->YAB1          --------->AHL20(1)
                                       <---------AHL20(1)    --------->AHL20(1)     --------->AHL20(2)
------>AHL20(1)                        --------->AHL20(2)   --------->YAB1  --------->AHL20(2)------
-------AHL20(2)                   --------->AHL20(2)--------->AHL20(2)  --------->AHL20(2)<---------YAB1
------>AHL20(2)             ---------->DOF2  ----------->GT1--------->AHL20(2)  <---------AHL20(2)
----->AHL20(2)        <---------TOE2(3)<---------AHL20(2)  <---------AHL20(2)   --------->AHL20(2)
 
aaaattgagagaatgtagaaattttgagataaaaagaataaataaaatttgtaaataaataaataatattaacaattttttaatttataaaatattatga  6342200
      <---------GLK1(2)
   --------->REM1(1)                                                 ------>ZmHOX2a(2)
------WOX13(1)   ------>NtERF2                                      *TSS
---YAB1       --------->ZAT2                                      <---------ICU4
-->ICU4       <---------ZAT2                                --------->WOX13(1)               <------
--------CBF   --------->At4g35610                         <---------YAB1<----------DOF2      =======
>YAB1<---------At4g35610        <-----------GT1  ------>MYB83  --------->YAB1<---------MYB52(1)
--->ATHB12    <---------At4g35610                ------>MYB46(1) <---------YAB1    <-------TEIL  <--
 
ttggctacagcttctctagctgcccaaactctgttttacaaaatcccaaaccaaacaagttatcattcatgatcgctttcgttatattcattctctcttt  6342300
                       <-----------TGA1
                      --------->ANAC58
                      --------->TGA1a
                      --------->ANAC46
                      --------->bZIP60(2)
                      <---------O2
                      --------->ANAC58
                      <---------TGA2(1)
                      --------->O2
                      <---------TGA1a
                      --------->TGA2(1)
                      <---------bZIP60(1)
                      --------->bZIP60(1)
                     <-----------STF1
                   =============MYC_MYB
                   --------->DEAR3(1)
                   ------->GAMYB
                   --------->At1g77200
                   ----------->HVH21                                                       ---------
                   --------->DREB2C(2)               --------->ARR14(2)                    <--------
                   --------->DEAR4(1)                <---------ARR14(2)                  --------->LBD16
                  --------->MYB46(3)               --------->DEAR3(1)                   <---------ANAC55(2)
                  --------->DEAR3(2)             --------->LBD16                        --------->ANAC55(2)
                <---------ALFIN1       --------->LBD16                                  <---------ANAC46
  <-----------------AGL1--------->TGA2(2)        ------>NtERF2                         <---------LBD16
================================bZIP_DOF   --------->HSFC1(2)                        <---------ARR14(2)
<----------DOF2--------->MYB46(3)    <---------LBD16 <---------GLK1(2)           <-----------------AGL1
----DOF2       <---------MYB55(2)   --------->MYB52(1)      <---------ALFIN1   ------>ZmHOX2a(1)
================================bZIP_DOF   <---------HSFC1(2)    <---------MYB52(1)  --------->ARR14(2)
---------GT1 --------->PCF2  --------->WOX13(1)  <---------At4g35610 <<<<<<<<<TBF1   --------->GLK1(2)
 
tctctttccattttggctcccaccgacgtcatcaatctctaccggagacttccgccgattctcacaccgttcttcttctctccttccgattccggattcc  6342400
       <----------DOF2
 <---------ANAC58                                     ------>ZmHOX2a(2)
 <---------ANAC58                                   --------->ARR14(2)
--------------->AtSPL8                              <---------AGP1          <<<<<<<<<CBP60g
>ARR14(2)                                   <----------DOF2                 <<<<<<<<<SARD1  ------>ZmHOX2a(2)
-ARR14(2)                            <-----------GT1<---------ARR14(2)  --------->LBD16    <--------
 
aatttcgttccttttttgttttctctcaaaacccctaaattttcttcctttcttcgatctggattttttgtgttccccaaatttcaagactttgatctga  6342500
                             <------------------------ANAC81
                        --------->ARR11(3)
                        --------->ARR14(3)
                        --------->ARR14(2)
                        <---------ARR14(2)                                                         <
                        <---------ARR11(3)                                                        <-
                        <---------ARR14(3)                                                        <-
                    ---------->DOF2                                                               --
                 --------->ANAC58                                                    <---------TOE1(2)
                 --------->ANAC58                          --------->ATHB12          <---------TOE2(2)
        <---------GLK1(1)  <----------DOF2     ------>ZmHOX2a(2)               --------->ZAT2    <--
        --------->GLK1(1) ------>ZmHOX2a(2)   <---------GLK1(1)                --------->At4g35610<-
       --------->ARR11(3)<---------RVE1(1)    <------ZmHOX2a(2)                <---------ZAT2  -----
       <---------ARR11(3)<------ZmHOX2a(2)    --------->GLK1(1)            <---------ARR14(2)  <----
     <---------TOE2(3)----------->ARR10      <---------ARR11(3)            --------->ARR14(2) <-----
-At4g35610     ---------->DOF2               --------->ARR11(3) --------->ZAT18<---------At4g35610--
 
ttccttctaagatttctccaaagcaaagatcttttttttgttttttgggatctctgtattgttgatgggcacaactagggtctgctcggaggtttcttct  6342600
                                                                                   <---------MYB46(3)
                                                                                <-----------RAV1(1)
                                                                               ------>ZmHOX2a(2)
------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)
---------GLK1(1)                                                              --------->CCA1(2)
--------AGP1                                                                 --------->AGP1
--------ARR14(2)                                                             --------->ARR14(3)
------->ARR14(2)                                                             <---------ARR11(3)
-------CCA1(2)                                                               <---------AGP1
--------ARR11(3)                     --------->AtMYB61                       <---------ARR14(3)
---->HSFB2a(2)             --------->ANAC58            <---------WRKY38(1)   --------->ARR14(2)
-----HSFB2a(2)             --------->ANAC46            <---------WRKY12      <---------ARR14(2)
----LBD16                  --------->ANAC58           --------->WRKY18(1)    --------->ARR11(3)   --
------->ARR11(3)        ----------->HVH21  ----------->RAV1(1)   <---------AtLEC2  --------------->AtSPL8
 
ggatcttcgaaatcgcttagccaatctctcacggtatcgacctctaccacagaaacagtcaatggtttccatgaattcaagatctgtgggtactctctcg  6342700
                                                 <---------MYB46(3)
                                                 ----------->GT1
                                                 --------->MYB55(2)
                                               <-------GAMYB
                     <---------ANAC55(2)       <---------MYB52(1)
                  --------->ARR14(2)          <------MYB83
            <---------ANAC46                  <------MYB46(1)
            --------->ETT(1)                 <---------DEAR4(1)
            --------->ATERF1(2)              <---------DEAR3(1)
            <---------At1g77200              <---------DREB2C(2)
           <------NtERF2                     --------->MYB111(2)
           --------->ATERF1(1)               --------->MYB46(2)
           --------->RAP2.6(3)    <-------TEIL<---------DEAR3(2)
       <------MYB83  --------->ANAC46        --------->MYB111(1)                                 <--
       <------MYB46(1)          --------->ARR14(2) --------->ARR14(2)                        -------
      <---------AtMYB61  <---------DEAR3(2)  <---------MYB46(3)                        --------->HSFC1(2)
     <--------P   <---------ARR14(2)         --------->MYB55(2)                        --------->HSFB2a(1)
   <-----------RAV1(1)<-----------HVH21     <---------ORA47(1)            <-----------GT1  <--------
   --------->ALFIN1 <-------TEIL<---------ARR14(2) <---------ARR14(2) <----------DOF2  <---------HSFB2a(1)
-------->DOF2 <------NtERF2     <---------MYB52(1)<-------GAMYB--------->WOX13(1)      <---------HSFC1(2)
 
ctaaaggtgttggtgtcggcaaatacgtcgcttccgatacgtttatggtcggtggttactcgtgggcaatctacttttatccagatgggaagagtccgga  6342800
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AGI:  At5g19000.1   
Description:  ATBPM1 (BTB-POZ AND MATH DOMAIN 1); protein binding. similar to ATBPM2, protein binding [Arabidopsis thaliana] (TAIR:AT3G06190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71081.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain TRAF-type (InterPro:IPR013322); contains InterPro domain BTB/POZ; (InterPro:IPR013069)
Range:  from: 6342269    to: 6344796    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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