Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ATHB51                      --------->ARR14(2)                      <---------ARR14(2)                     <---------KAN4(1)                     --------->HSFB2a(1)                     <---------HSFB2a(1)                     --------->KAN4(1)                     <----------TaMYB80                    <---------ARR14(2)                                 --------->MYB52(1)                    --------->ARR14(2)                  ------>ZmHOX2a(1)    ----------->GT1 ---------->TaMYB80                  --------------->AGL15 ---AtLEC2          <---------KAN4(2)                   <---------------AGL15        <----------DOF2 ---GT1---------->DOF2--------->KAN4(2)                --------->TOE2(3)  ------->GAMYB   ttcagacagaaaatcgccagagaatattctccataatttgatcaaatgttttaaaatcctaaatttagaatactaacagactaatgtctttttagttgtc  6309700                                                                                            ---------                                                                                      ===============                                                                                      <--------P                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                   <---------MYB46(3)                              ----------->RAV1(1)                                  --------->MYB59              <---------AHL20(2)                      --------->YAB1               --------->MYB46(2)              --------->AHL20(2)                   <----------DOF2                 --------->MYB111(2)   <----------ID1  <-----------GT1        --------->YAB1                           --------->MYB111(1)   aaattggaacaaaaatttaaatcaccattttgcaacaaaaacaatgacattttctttgatattcaagaaaacaaaaattgtttgtttggtagtttattct  6309800                                      <-------MYC3                                      <-------MYC2                                      ------->MYC4                                      ------->PIF5                                      ------->MYC2                                      ------->MYC3                                      <-------PIF5                                     =================================MYC_MYB                                     --------->TGA1a                                     <---------TGA1a                                     --------->bZIP60(2)                                     <<<<<<<<<<HY5                                     ==============================bZIP_DOF                                     <---------O2                                     --------->O2                           <------MYB46(1)                           <------MYB83                          <---------MYB46(3)                          --------->MYB55(2)                         <---------ANAC46                       <------MYB83  --------->ANAC55(2)                       --------->MYB55(2)                       <------MYB46(1)<-------MYC4                       --------->MYB52(2)                       <---------MYB46(3)      ----------->HVH21                      <---------DEAR3(1) ----------->HVH21                    <-------MYC3     <<<<<<<<<<AtMYC2                    ------->MYC3--------->ANAC58                   ================================================bZIP_DOF                   --------->O2 --------->ANAC46               --------->MYB52(2)                   <---------TGA1a   <---------ANAC55(2)     <--------P              --------->PCF2  <---------DOF5.7(2)       ---------->DOF2            --------->At4g35610 <---------bZIP60(1)  ----------->RAV1(1)       <---------YAB1 <---------AtMYB61 <-----------HVH21 <---------TOE2(3)   <---------ANAC58--------->TGA1a   <--------ABF1  --------->ANAC46   <---------ANAC58<---------O2 --------->ANAC58    --------->ANAC58      --------->bZIP60(1)  --------->ATHB12<---------TOE1(2)  <<<<<<<<<<ABI5 <---------ETT(1) --------->At4g35610 <---------YAB1  <---------ALFIN1  <---------ALFIN1 ----------->HVH21--------->ZAT2 >KAN4(2)   <---------At4g35610 --------->bZIP60(1) --------->ANAC58 <---------At4g35610            < ============================MYC_MYB------>NtERF2  --------->MYB46(3)<---------ZAT2        --------->GLK1(2)   ctattgattgtgatagctcccacgttggtgggtaacgccacgtgtcacagtgacccgacaaaggttagtggagctgaagtcatttgagacaacaatcttt  6309900                                                 <---------AtLEC2                                               <---------YAB1                  <---------MYB52(2)  --                                      <---------WRKY18(1)                     ------>MYB83        <--                                     --------->WRKY38(1)      <---------HSFC1(2)                  <--                                     --------->WRKY12         --------->HSFC1(2)  --------->MYB52(1) ----------DOF2                      --------->WRKY45      ---------->DOF2    ------>MYB46(1)  <-----   gtcttttgttcaacttctactcttggacttatctacatgttgaccacttatgcatgagactgaaagcttcttcttataccaactaaacgggcctgggctt  6310000                                                                  --------->ZAT2                                                                  <---------ZAT2            ----------->TBP                        <---------ARR14(2)          --------->TOE1(3)                 <---------GLK1(1)     *TSS          --------->TOE2(3)                 --------->GLK1(1)     --------->At4g35610               - --------->GT1---------->DOF2     <-----------GT1  --------->ARR14(2)                              -- -------TOE2(3)              <---------AHL20(2)    ------->TEIL   <---------At4g35610     --------->ZAT14 -------TOE1(3)       ---------->DOF2<----------DOF2      <<<<<<<<<TBF1                   <---------ZAT14 -----DOF2<----------DOF2    --------->AHL20(2)   <---------CCA1(2)                     --------->At5g28300   taggttaaaaaactttaaaagcccaaaagaataaaataactttccgatttctgaatcttcttcttctctgctgaagaaactaaatttcgcagtgaaatgg  6310100                                                 ------>NtERF2                                                 --------->At4g35610                                          <---------ALFIN1                                --------->HSFB2a(1)     --------->YAB1                           --------->ANAC58      --------->LBD16            --------->GLK1(2)   <---------HSFB2a(1)    <---------ATHB12            <---------ARR14(2)  --------->HSFC1(2)    <---------ARR11(1)            --------->ARR14(2)  <---------HSFC1(2) --------->DEAR3(1)      <---------ANAC46     --------->ANAC55(2)  --------->DEAR3(1)    --------->MYB52(1)     --------->ANAC58  <---------ALFIN1   ----------->TGA1        <---------ANAC55(2)<---------ATERF1(1)                       ----------->GT1   ----------->HVH21       --------->ANAC46------>ZmHOX2a(1)                           --------->GLK1(2) -------->DAG2             --------->ANAC55(1)------>ZmHOX2a(1)                ----------->TGA1  <--- -------->DOF2         --------->LBD16  ------>ZmHOX2a(1)              <---------At4g35610       ----   agaaagtgacggagaatcccaattccgagacgcaaccttctcctcctcctccgccgaatcatcaaatggatgcagacgacgatgacgagaatgtgaaaca  6310200                                                                                      --------->ATHB12                                                                                  <---------ICU4                                                                                  -------->ATHB1                                                                                  --------->ATHB12        <---------ZAT14                                       --------->LBD16    <---------ATHB12       <---------ZAT6                                    <---------GLK1(1)  ------>ZmHOX2a(1) ------At4g35610           <----------DOF2          <----------DOF2        --------->TOE1(3) ----->At4g35610        <-----------GT1         <---------CCA1(2)          --------->TOE2(3)     <---   gctcaaggagtgttcttctctctatttatctttacaggtttgtgtttctcatctctttgatttccccaaatcaaattccttaaatcattgatttcgattt  6310300                                                                   --------->ANAC55(2)                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                   --------->ANAC46                                                                  ------->TEIL                                                                --------->TOE1(2)                                                                --------->TOE2(2)                                                                <---------SPL7                                                              --------------->AtSPL3                                                              --------------->AtSPL8                        <---------ANAC58                      <---------------AtSPL8                        <---------ANAC58                      <---------------AtSPL3                   >>>>>>>>>ARR1                        ----------------->AGL1                   >>>>>>>>>ARR2                        ----------------->AG                   >>>>>>>>>ARR2                  <---------ARR11(3)                   >>>>>>>>>ARR1                  --------->ARR11(3)<-----------HVH21          ------                  <------ZmHOX2a(1)              <---------GLK1(1)--------->SPL7        --------->TOE2(3) ------YAB1     <---------TOE1(2)--------->YAB1  --------->GLK1(1)<-------TEIL    --------->ZAT6   tgtttgtctccgattttgtaggattgtcttgttgatagtaatagggactggaaatcttgccaaaaacgtacgtcactctctctatctctatctcaatttg  6310400                                                          --------->TOE1(2)                                                      ------>MYB46(1)                                              <---------------AtSPL3                                              --------------->AtSPL8                                          <---------TOE1(3)  --------->ANAC58                                          <---------TOE2(3)  --------->ANAC58--------->TOE2(3)                                      ----------------------->TaNAC69(2)    <---------ZAT6                                      <----------DOF2 ------>MYB83          ----------->GT1                                ---------->CDC5     <---------MYB46(2)     <---------YAB1           <       --------->GLK1(1)        <-----------RAV1(2) <---------MYB59     --------->ICU4          <----       <---------GLK1(1)     <---------At4g35610    <---------MYB111(1) <---------YAB1          ----- ----->GT1                   --------->At4g35610  ------->TEIL    --------->TOE1(2)         <------ZmHOX2a(1)   taaattctgaaatctgagggttttagtttagagctcaggggtttagggtttgtacctaatcgaacgaaactgggattattgttaatatgtgtgaggaatt  6310500                                                               --------->ANAC55(2)                                                               <---------ANAC46                                                               <---------ANAC55(1)        --------->YAB1                                         <---------ANAC55(2)      <---------WOX13(1) <---------GLK1(2)                <---------MYB46(3)    --------->ATHB12     --------->ARR11(1)         <-------GAMYB <---------At4g35610     --------->ARR14(2)        <---------MYB46(3) ---------MYB46(3)       <---------ARR14(2)        --------->MYB52(2)                <----------DOF2 -------RAV1(1)       <---------WOX13(1)        ------------>MYB.PH3(2)    --------->ARR11(3) ---->ATHB12---------->DOF2             <---------YAB1  <---------ANAC46   <---------ARR11(3)       <   gttggctgattgataaaagaactgatggattcggacaaaatgttgataagagtttgttgtttgttatgtgttacaaagatgttcaagctttgaaggaatg  6310600  Previous    Next  AGI:  At5g18920.1    Description:  similar to Os05g0404300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055502.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71063.1) Range:  from: 6310066    to: 6310848    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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