Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------DEAR3(1)                             ------>NtERF2          =================HOX2a_HOX2a                            --------->ANAC58        ------>ZmHOX2a(2)                            --------->ANAC58       ==================HOX2a_HOX2a                            --------->ANAC46       <---------GLK1(1)                            --------->bZIP60(1)   <---------ARR14(2)                            <---------bZIP60(1)   <---------ARR11(3)                          <---------ATERF1(1)     --------->ARR14(2)                        --------->ATERF1(1)       <---------AGP1                       <---------ATERF1(1)        --------->ARR11(3)                    ------->GAMYB                 <-----------ARR10                  <---------At4g35610             --------->ARR14(3)                  --------->At4g35610             <---------ARR14(3)                 <---------DOF5.7(2)      --------->LBD16<---------DEAR3(1)                 --------->MYB52(1)      --------->LBD16<---------LBD16                 --------->ALFIN1                <---------WRKY45        <---------LBD16 <------NtERF2                 <---------ANAC46                <---------WRKY12        <---------HSFB2a(2)   <------ZmHOX2a(1)       --------->ALFIN1                <---------WRKY38(1)     --------->HSFB2a(2)<------NtERF2           --------->DAG2               --------->WRKY18(1)<-----------ARR10<------ZmHOX2a(2)             ---------->DOF2   --   agacctgaacatttgcagtcaacggagacgacgccataacttcccggattaagatctcggcggaggaaaacaaaaaaaaactcgaaaggtgtggaacaca  5692500                          --------->ARR14(2)                          ------->TEIL                          <-----------ARR10                          <---------ARR11(1)                                                 --------                          --------->GLK1(2)                                         -----------------                          <---------ARR14(2)                                       ------>ZmHOX2a(2)                         <---------CCA1(2)                  --------->ZAT14       <------ZmHOX2a(2)                         <---------ARR14(1)              ================================HOX2a_HOX2a                      <---------HSFB2a(2)                =================================HOX2a_HOX2a                --------->AHL20(2)            <---------At4g35610                <---------ARR11(3)  ----------->GT1     --------->HSFB2a(2)     --------->At4g35610   <---------MYB52(1)  --------->AHL20(2) -------->DOF2<---------ARR11(3)   ----------->GT1       ------>ZmHOX2a(1)       --------->ARR11(3)   gaaaaggaaacaccaagataaattcgcgaatctagacttgaaaaaatcagcttaatttcctctgttctccgtctgtttctatagatcccataaattgatt  5692600                                                                --------->LBD16                                                               --------->HSFB2a(2)                                                               <---------HSFB2a(2)                                                             ------>MYB46(1)                  --------->MYB52(1)                       <---------DAG2                 ------->GAMYB                          <---------ALFIN1                --------->MYB46(3)                      <-----------------AGL1                <---------MYB55(2)                 <---------At4g35610                <---------MYB52(2)                 --------->HSFC1(2)              ----------->RAV1(1)            ------>MYB83  --------->AtMYB61             --------->REM1(1)            --------->MYB46(3) ------>MYB83                   <--------             --------->MYB46(3)      --------->YAB1<---------HSFC1(2)                       ---------        --------->ANAC58   <---------ANAC58  ------>MYB46(1) --------->MYB52(1) <---------At4g35610 ->ATHB12  ----------->RAV1(1) --------->HSFB2a(2) --------->At4g35610        <---------HSFB2a(2)  <- >AGL3  --------->ANAC58   <---------ANAC58 --------->WOX13(1)<---------LBD16 --------->HSFB2a(2) <--   cggtttacttaggcaacaacaaacgatttgcttctgaaatcagaaccaatctaagcttccaccttccggaaaaaaaacttccagcaaaccagagatttct  5692700                                                     <---------TOE2(3)                 <----------ID1               ------>NtERF2        --------->DAG2                        --------->LBD16                                   -----       ---------->DOF2                       --------->RAP2.6(2)                                <---- -GLK1(1)        ----------->GT1      <---------ARR11(3)                                        ----- >GLK1(1)<---------TOE2(3)            --------->ARR11(3)                                   <---------HSFB2a(1) --------YAB1---------->DOF2         <---------GLK1(1) <------ZmHOX2a(1)      ------->TEIL <---------HSFC1(2) -------TOE1(2)----------->GT1       --------->GLK1(1) --------->YAB1--------->ETT(1)      --------->HSFC1(2)   tatgttcgataaaggaaaagagaaaaaaactctcgctggaaatcttgccgcaaataaggataagaagaaggtcggaaatgaaactctcagagaaactccg  5692800                                             <---------At4g35610                                             --------->At4g35610              <------NtERF2           <---------YAB1   >>>>>>>>>TBF1             --------->LBD16   --------->ANAC58     ------------------------>ANAC81     <---------AtMYB61         --------->ANAC58 <------NtERF2 ---->LBD16<---------LBD16<----------ID1     <---------LBD16 -----HSFB2a(2)         ---------->DOF2    <---------DEAR3(1)               >>>>>>>>>TBF1           - ---->HSFB2a(2)   ---------->DOF2 <----------DOF2   >>>>>>>>>TBF1    ---------->DOF2             <---   agaagttttggtagccggagtaaagaaaaagacaagctttctgattcggcggaagaagaagaaaacagagagaaagaagaagaagagaagagtttggggt  5692900                                                                       <---------GLK1(2)                                                                      <---------ZAT2                                                                      --------->At4g35610                                                                      <---------At4g35610                                                                   --------->TGA2(2)                                                                  <-----------HVH21                                                                  <-----------TGA1                                                                 --------->O2                                                                 --------->TGA1a                                                                 <---------O2                                                                 --------->ANAC58                                                                 <---------bZIP60(1)                                                                 --------->bZIP60(2)                                                                 --------->bZIP60(1)                                                                 <---------TGA1a                                                                 =================================bZIP_DOF                                                                 --------->ANAC58            --------                              ----------->GT1               <---------bZIP60(1)            ----------                          <---------ANAC58                  --------->bZIP60(1)            <---------     <------ZmHOX2a(1)    <---------ANAC46               --------->ALFIN1              <----------DOF2    *TSS<------ZmHOX2a(1) <---------ANAC58       --------->DAG2  <<<<<<<<<<AtbZIP1     <---------DAG2 ---------->HVH21         ----------->GT1       ===========================bZIP_DOF<---------ZAT18 ------DEAR3(1)          <---------DEAR3(1)     ---------->DOF2  --------->ANAC46  --------->ZAT18   ctgtgaaggaggaagaagggaattaggggggtgagaaaatagggaagacaaaaaggagggtgatgccacgtcagcttctgctatgtgcgctttttcccaa  5693000                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  ---                    --------->ICU4                                                                ---                  <---------ICU4                                                                  <--                  -------->HAHB4                                                                  ---                  --------->YAB1                                                                  <--                  <--------ATHB1                                                                  <<<                 <---------ATHB51                                                                 <--                 --------->ICU4                <---------HSFB2a(2)                                ===                 <---------YAB1           <---------HSFB2a(1)  <---------ARR14(3)                 <<<               --------->YAB1             --------->ANAC58     --------->ARR14(3)                 <--             --------->AHL20(2)           --------->ANAC58     --------->GLK1(2)                  <<<             --------->AHL20(1)           --------->HSFB2a(1)  --------->ARR11(3)                 ===            --------->YAB1           --------->ANAC46          <---------ARR14(2)          ========== ---->CBF --------->AHL20(2)       <---------AtLEC2            <---------ARR11(3)    ---------------- >ID1    --------->YAB1<---------YAB1--------->AtLEC2     ----------->GT1      <-------TEIL<--------- --GT1  --------->AHL20(2)    <<<<<<<<<MYB2    --------->HSFB2a(2) <-----------RAV1(1)    <---------ICU4   tttttaaaaaataaaaataataattcttattggttttccatggaacgctcgagaaacagatggaaaatcttgtggctcacgttcaatgtccatctttgcc  5693100 <-----------HVH21 -----------RAV1(1) -------->ALFIN1 ----->MYC3 ----->MYC2 ------MYC4 ------PIF5 ------MYC3 ----->PIF5 ------MYC2 ----->MYC4 ------>bZIP60(2) ------>ANAC55(2) ------>TGA1a -------TGA1a ------>O2 -------ANAC55(2) <<<<<<<ABI5 -------O2 ==================bZIP_DOF                                                                        <- <<<<<<<HY5                                                                                   <------ ------ABF1                                                                                   ------- <<<<<<<AtMYC2                                                                            --------->AHL20(2) ==================bZIP_DOF                                                               <---------AHL20(2) =======bZIP_DOF<---------GLK1(2)                                  <-----------GT1    --------->AHL20(2) ------->TaNAC69(2)                   ----------->RAV1(1) <---------AHL20(2)      --------->AHL20(2) -DOF2  <----------DOF2      <----------DOF2  --------------->AtSPL8    <----------DOF2  --------->AHL20(2)   acgtgtcgctctttctcatattcttcatcttctttttttgcaacaaaatttgtactagatttattcatttatctctttgaaaaatcaaatatttaatttt  5693200                                                                             <----------DOF2                                  <------MYB46(1)                <---------AHL20(2)                                  <------MYB83        ------->TEIL           <---------DAG2                                 --------->MYB59<-----------GT1  --------->AHL20(2)             -----      ------->TEIL               <---------------AtSPL8   ------->TEIL    <---------ALFIN1      <---- --------AHL20(2)           ----------->ARR10  <---------YAB1   --------->AHL20(2)      <----------DOF2 ---AHL20(2)              <---------MYB52(1) <---------ICU4  <---------AHL20(2)       <-------------- -->AHL20(2)         ------------>MYB.PH3(1) --------->YAB1  --------->AHL20(2)    <----------DOF2 <-   ttaaaatgaatctacttgttttaaaacagttagatttggtacttcgattatcactgtatgtatttatttaattcccctacttttcctttccttttttgac  5693300                                              <---------ICU4                                             --------->ICU4                                            <---------AHL20(1)                                           --------->YAB1                                         <---------AHL20(1)                                         --------->AHL20(1)             ----------->HVH21          <-                                         --------->AHL20(2)             <---------SPL7             --                                    <------ZmHOX2a(1)           <---------ARR11(3)                 --                                   ----------->GT1              <---------GLK1(2)                  <- ---->bZIP60(1)               --------->RVE1(1)    --------->ANAC55(2)<---------ANAC58           ---- -----bZIP60(1)           --------->AHL20(2)<---------AHL20(2)  --------->ARR11(3)         ------>NtERF2 ---AGL3           --------->AHL20(2)   --------->YAB1      ---------->DOF2 ----------->GT1---------- --------ICU4 --------->GLK1(2)  <---------LBD16  <---------TOE2(3)   <---------ANAC58   --------->MYB46(3)   atcatttcaattggataatcttttaatataaaatatcaggaaatataatatttatgtaacaaaaaagattttgctggacggagaaatgtgagccaccaga  5693400  Previous    Next  AGI:  At5g17300.1    Description:  myb family transcription factor. similar to EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1) [Arabidopsis thaliana] (TAIR:AT1G18330.2); similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10113.1); similar to EPR1 (EARLY-PHYTOCHROME-RESPONSIVE1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G18330.1); similar to putative At5g37260-like protein [Solanum chilense] (GB:ABW22160.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-bi Range:  from: 5690229    to: 5692904    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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