Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->HSFB2a(2)                                                                 <---------HSFB2a(2)                                                       --------->YAB1                                                      <---------YAB1                                                     <-----------GT1                              ---                                                   <---------AHL20(2)                            ----                                                <---------ARR14(2)           --------->ARR14(2)  ----  ----------->GT1                               --------->ARR14(2)--------->LBD16                ----  <----------ID1           ------->TEIL   <---------GLK1(1)      --------->ANAC46         <---------YAB1 --------->DOF2     <---------YAB1    <---------HSFB2a(2)       <---------LBD16       --------->GLK1(1) ----->AHL20(2)   --------->YAB1      --------->HSFB2a(2)<---------YAB1      <---------ARR14(2)  <--- ------AHL20(2)  <---------ATHB12    <---------LBD16<-----------GT1          --------->ZAT14 <-------   taaaaagaaaaaaccccaaatcacgattgtacccataaatctggaaatcggattttatcattcttctccggaaaaacagtattctctgaattctaattga  5362700      --------->AHL20(2)     <---------AHL20(1)     --------->AHL20(1)    --------->AHL20(2) --->NtERF2 ----->ANAC58 ----->ANAC46 ----->ANAC58              ----------->GT1 -------ID1                --------->YAB1                                                   <-------- --WOX13(1)         --------->GLK1(2)----------->GT1     ----------->ARR10    ----------->GT1  ------   cgccaaatatatatacagagagaatcaaatcgtaaaatgcagataaaaactaatcgacgaagattagccaaacaaaacttgagtaaattgaaattatcca  5362800                                          --------->YAB1                                          --------->TOE2(3)                          <---------ANAC58                                       <---------CCA1(2)           <---------ANAC46  <---------ANAC58                                     ======================HOX2a_HOX2a              --------->HSFC1(2)                                     ------>ZmHOX2a(2)             --------->TOE1(2)--------->ZAT2      --------->DAG2               <---------ARR11(3)            ------->TEIL       <---------ZAT2     ---------->DOF2               --------->ARR11(3)           <---------CCA1(2)   <---------HSFC1(2) ---GT1 ----------->GT1    =================HOX2a_HOX2a     <---------ANAC46 --------->DAG2    ------ --------->AGL15           <------ZmHOX2a(1)        <------ZmHOX2a(1)       ---------->DOF2    <-----   tatttcgaaaagctaaaaactacattgcaggataaatgatcttatcttaatcgaggaaggaatcgtgtaccttggagagaaagcgaagcttgggcttagc  5362900                                                                                     ----------->RAV1(2)                                                                                     <---------At4g35610                                                                                     --------->ZAT2                                                                                     --------->At4g35610                                                                                   <-----------RAV1(2)                                                                                  <---------At4g35610                                                                                  --------->At4g35610                                                                                 ================RAV                                                                                 ----------->RAV1(1)                                                                               --------->ZAT2                                                                               --------->At4g35610                                                                               <---------At4g35610           <---------GLK1(2)                                                  =================RAV         --------->ANAC58                                                     ===================RAV         --------->ANAC58                                              --------->ANAC58       ---------->DOF2                                                 --------->ANAC58    --------->ANAC58                                      <---------WOX13(1)  ----------->RAV1(1)    --------->ANAC58                                     <---------ANAC58   --------->At4g35610  --------->CCA1(2)                        --------->ALFIN1            --------->ANAC46 --->At4g35610              <---------ARR14(2)           <---------ANAC58   <---------At4g35610------ ----At4g35610              --------->ARR14(2)   <------ZmHOX2a(1)    <---------LBD16<---------ZAT2   agagagacggaaagaaactctgcgagagcggttttggattgggaagtgcgaggaggtttgagtgactgcatagacggaagcagcagcagctggagatgtg  5363000                                                       <---------TOE2(3)                                                       --------->MYB59               ------>NtERF2<---------YAB1     <------ZmHOX2a(2)              --------->ANAC58                <---------ARR14(2)                          --------->MYB46(3)              --------->RAP2.6(2)  --------->ATHB12    <---------TOE1(3)         --------->ZAT18 <---              --------->ANAC58    <---------YAB1------>ZmHOX2a(2)             ---------->DOF2    <---     <----------ID1    ---------->ID1  <---------MYB46(3)<---------GLK1(2)  ---------->DOF2      ---- ----->HVH21  --------->ANAC46 <---------YAB1 --------->ARR14(2) <---------------------WRI1----------   actgagaacgacgaagacgccattcgtcttcttattgttattggttcagatcgggtttaggttctctctcgatgaaaccaaagagcacaacaacaacagt  5363100                                                                                <-----------HVH21                                                                              ------->MYC2                                                                              ------->MYC3                                                                              <-------MYC3                                                                              <-------MYC2                                                                              <-------MYC4                                                                              ------->MYC4                                                                              <-------PIF5                                                                              ------->PIF5                                                                             <--------ABF1                                                                             --------->TGA1a                                                                             <---------O2                                                                             --------->bZIP60(2)                                                                             <---------TGA1a                                                                             --------->O2                                                                             <<<<<<<<<<AtMYC2                                                                             <<<<<<<<<<ABI5                                                                             <---------ANAC55(2)                             *TSS                                            --------->ANAC55(2)                            <---------ARR14(2)         <-----------GT1      ------>NtERF2      ---------->DOF2       <---------GLK1(2)         <---------YAB1       <---------ALFIN1  --------->ZAT14           --------->ARR14(2)      --------->YAB1       <-----------------PIF3(1) ------ZAT18             --------->ETT(1)          <---------YAB1    --------->GLK1(1)        <------ ------ZAT14             <---------ANAC46     =========================================bZIP_DOF ----->ZAT14         <---------ARR11(3)       <----------DOF2 <----------DOF2<<<<<<<<<<HY5   ------>ZmHOX2a(2) ->RAV1(1)           --------->ARR11(3) <---------CCA1(2)     =========================bZIP_DOF <----   tcacttcagaaagagagagagaagatgtcggattcggaacgcgtttctctttgattataactctctttcagatttcgccacgtgtcatactctgatctgt  5363200                                                                           <----------DOF2                                                                        <-----------GT1                              <---------ZAT18                          <---------YAB1                              --------->ZAT18                        -------->ATHB1                         <---------ANAC58                            <--------HAHB4                      --------->ARR14(2)                             --------->ATHB51                   ------------>CBF                                  <---------ICU4             <---------ARR14(2)                             <---------AHL20(2)    --------->AHL20(2)     --------->ARR14(2)  <---------ANAC58        --------->TOE1(3)   --------->YAB1     <---------ARR14(2)<---------ATHB12          --------->TOE2(3)  --------->ICU4<---------AHL20(2) -----RAV1(1)--------->ARR14(2)               <-----------GT1    --------->AHL20(2)                 < -----MYB52(1) --------->KAN4(2)     --------->YAB1         --------->AHL20(2)--------->AHL20(2)    <   tgttctgtattcgcgattactcccaatccttgtggactatcgtattttttaccttgaagaatttaaatgaattattacttttaaataaatataaaaaatg  5363300            ------>ZmHOX2a(1)          <-----------------AG          ----------------->AGL1                  <---------ARR14(2)          ==============================================MADS_MADS           --------->ARR14(2)          <-----------------AGL1                  --------->ARR14(2)        <---------ARR14(2)        --------->ARR11(3)                       <------ZmHOX2a(1)          --------->GLK1(2) ----------->GT1          <---------YAB1  <----------DOF2                  --------->RVE1(1) <---------ZAT6         <-----------GT1 <---------------AGL15       ----------->GT1 ---------TOE2(3)  <------ZmHOX2a(1)    --------------->AGL15       --------->ANAC58      ---------->DOF2 ---------TOE1(3)<---------TOE2(3)  --------->ZAT14                 --------->ANAC58  ------->TEIL   ttagggttaaaatcctgtttaggaaattacaatttctctaaactctttagaggaaacacattttttcagcaagaaaaaaatccgactgcatctaaagatg  5363400                      <---------YAB1                     --------->AHL20(2)                                              <---------AHL20(2)        <---------DEAR3(2)                                                           <---------AHL20(1)       <---------At1g77200                   <------ZmHOX2a(2)          --------->ANAC58       <---------DEAR4(1)                   --------->AGP1              --------->ANAC58       <---------DREB2C(2)        <-------TEIL                          --------->ANAC46       <---------DEAR3(1)    <---------AHL20(2)       --------->TOE2(3)--------->SPL7--------->AHL20(2)    <-----------RAV1(1)      --------->AHL20(2)     <-------TEIL   <-------TEIL     --------->AHL20(2)   aaaatgctgtcggtgtctccaatttttataaaaaaatacatgaatagatccaaatacattagcctaatatacatacgccaaatgtattaaatttttaaaa  5363500                                                  --------->GLK1(2)                                              <-----------GT1                                        <---------ANAC58                                        <---------ANAC58                                   --------->CCA1(2)                                  <---------ARR14(2)                                           ------                     --------->MYB46(3) <---------ANAC46                                     --------               <------MYB46(1)    --------->ARR14(2)                                       --------->ANAC46               <------MYB83       <---------ARR11(3)                                       --------->ANAC58           <---------ARR14(2)     --------->ARR11(1)   --------->ZAT2              ---------->DOF2           --------->ARR14(2)     --------->ARR11(3)   <---------ZAT2   <-------TEIL       --------->ANAC58   ttaggcgagactggatttggtgaacaactaaatgaagatatgacttgttaacaatctagctggaagttggaacatccattgaaaacaaagcacaagcatc  5363600  Previous    Next  AGI:  At5g16390.1    Description:  BCCP/BCCP-1/BCCP1/CAC1-A/CAC1A (BIOTIN CARBOXYL CARRIER, BIOTIN CARBOXYL CARRIER PROTEIN 1); biotin binding. Identical to Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplast precursor (BCCP1) [Arabidopsis Thaliana] (GB:Q42533;GB:O04845;GB:Q9LL78); similar to BCCP2 (biotin carboxyl carrier protein 2), biotin binding [Arabidopsis thaliana] (TAIR:AT5G15530.1); similar to biotin carboxyl carrier protein [Brassica napus] (GB:CAA62261.1); contains InterPro domain Single hybrid motif (InterPro:IPR011053); contains InterPro domain Acetyl-CoA biotin carboxyl carrier; (InterPro:IPR001249); contains InterPro domain Biotin-binding s Range:  from: 5360804    to: 5363129    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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