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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                        ------>ZmHOX2a(2)
                                                                       <------ZmHOX2a(2)
                                                                      --------->AGP1
                                                                      <---------ARR11(3)
                                                                      --------->ARR14(2)
                                                                      --------->ARR11(3)
                                                                      <---------AGP1      -------->HAHB4
                                                                      <---------ARR14(2)  --------->ATHB12
                                                              --------->DAG2             <---------YAB1
                                             --------->MYB52(1)      <---------CCA1(2)   <---------ATHB12
   ----------->RAV1(1)           ------->GAMYB               ---------->DOF2             --------->ICU4
-->AHL20(2)                     --------->MYB46(3)       --------->AHL20(2)        --------->YAB1
 
atagaacaacacagagaagttttgactcgaattcaaccaagactcaaaaaacgatgggaattaaaaaagcacagatctaacatctatgagaaatgattgt  5262400
                                        --------->AtLEC2
                                    ------>NtERF2
                                    --------->LBD16
                                   --------->ANAC58
             ----------->GT1       --------->ANAC46
            --------->DAG2         --------->ANAC58                     >>>>>>>>>TBF1
           ---------->DOF2      <---------ARR14(2)                   >>>>>>>>>TBF1                --
        ----------->GT1         --------->ARR14(2)                >>>>>>>>>TBF1               <-----
       --------->DAG2     ----------->GT1               --------->MYB52(1)                   <------
     ---------->DOF2     ------>ZmHOX2a(2)---------->DOF2      >>>>>>>>>TBF1  <------ZmHOX2a(1)  ---
 
ggatgaacaaaaggtaaagtaacttcgatctgtaaaatccgccatgaaaggaacttaagaaacgaagaagaagaagaagaaggagaatgagagagagatg  5262500
               --------->LBD16
              <---------LBD16
              <---------HSFB2a(2)
         <---------ARR11(3)
        --------->RVE1(1)
  ----------->GT1                                 --------->CCA1(2)
--------->RAV1(2)     <------ZmHOX2a(1)  <---------ANAC46
----REM1(1)  <---------LBD16           --------->MYB52(1)
-----------------TaNAC69(2)           ----------->HVH21                                           --
---->TEIL--------->ARR11(3)           ----------->TGA1  ---------->DOF2                  -----------
 
tacctgagtaaaaatctccgggagaggagagagagagaacgatgacggagaagatagaagaaagagagagagagagagagagagagagagaggcgaaaaa  5262600
                                                                                   <---------LBD16
                                                                                  <---------ANAC58
                                                                                  <---------ANAC46
                                                   <---------AtMYB61              <---------ANAC58
                    <---------YAB1            <---------MYB46(3)              <---------HSFC1(2)
      <---------ARR14(2)                     --------->ALFIN1                 --------->HSFC1(2)
      --------->ARR14(2)  <------ZmHOX2a(1)--------->ALFIN1                ------>NtERF2
------->TOE2(3)  <---------AHL20(2)        <-----------RAV1(1)            --------->DEAR3(1)
>GT1 <------ZmHOX2a(1)---------->DOF2  ---------->DOF2                --------->DEAR3(2)
 
tcgttagaggaaatggggattttataaaaggatgagaccgaagaaagtgtgggtgaggttgaagacaacatgaaacgacgacgtttcgtggaattgggaa  5262700
                                                    <------NtERF2
                                                   ------>NtERF2
                                                  --------->DEAR3(1)
                                                  <---------DEAR3(1)
                                                 <------NtERF2
                                              <---------LBD16
                                        <----------DOF2
                                        <---------DAG2                 --------->ZAT18
                                       <---------ANAC58      <---------ZAT6                ------->TEIL
                                       <---------ANAC46    --------->YAB1   --------->At4g35610
                 ----------->GT1       <---------ANAC58   --------->ICU4    <---------At4g35610    -
   <----------DOF2              ---------->DOF2<---------DEAR3(1)      --------->ETT(2) --------->AtLEC2
 
tttttgctttaaaaacaaaatagtatatcaaactggaaagttgctttttctcggcgtcgtaatagtgatatttgtggacagcttaattttcatgcatttc  5262800
                                                   --------->ARR11(3)
                                                  --------->ATHB12
                                                  <---------ICU4
                                                 <---------YAB1
                                                 <---------ATHB12
                                                 --------->ICU4
                                                <---------TOE2(3)
                                               <---------ICU4
            <------------MYB.PH3(2)          <---------YAB1
          <-----------GT1                 *TSS --------->YAB1
       --------->ANAC46                 <---------ICU4                                 <---------YAB1
       --------->ANAC55(2)           <---------WRKY12                                <---------GLK1(1)
  <---------YAB1 <----------DOF2     <---------WRKY38(1)                    <-----------GT1       <-
 --------->AHL20(2)    <----------DOF2 --------->ICU4           <----------DOF2      --------->GLK1(1)
<---------ICU4<---------ARR11(3)     <---------WRKY45         --------------->AGL15 <---------ARR11(3)
-------->ICU4 --------->ARR11(3)    --------->WRKY18(1)       <---------------AGL15 --------->ARR11(3)
 
taatttttataagtaactatctttctctttattctattggtcaacattactaatgattttgttttctctttttagtttttaacatcagatatcattctct  5262900
                                                                             <---------AHL20(2)
                                                                             --------->ATHB12
                                                                             --------->ATHB51
                                                                             -------->HAHB4
                                                                             <---------ICU4
                                                       <---------MYB52(1)    -------->ATHB1
                                                <---------YAB1              <---------ATHB51       -
                                              <---------GLK1(1)             --------->ICU4         <
                                              --------->GLK1(1)           <---------ICU4           -
                                        --------->TOE2(2)              --------->ANAC46           --
                          <----------DOF2    <---------ARR11(3)      <-----------GT1       ---------
                        ---------->ID1  --------->TOE1(2)--------->MYB52(2) <---------YAB1 <------MYB83
             ---------->ID1       ------>ZmHOX2a(1)    ------>ZmHOX2a(1) --------->ICU4    <------MYB46(1)
     <----------DOF2   <-----------GT1 --------->YAB1 --------->TOE2(3)--------->ANAC55(2)--------->MYB46(2)
-----------------------ANAC81 <-----------GT1--------->ARR11(3) <---------ICU4            --------->MYB59
 
tgttttctctttttttggtgtttttttttcttttttcctctaacataagatatcattccttagttgataatttcacataattattgtttttgtttggtaa  5263000
             ------->TEIL
      <---------AHL20(1)
      --------->AHL20(1)                                                                       <----
      --------->AHL20(2)                                                                      ------
-------->GLK1(2)                                                                            <-------
---------ARR11(3)   <---------YAB1--------->AHL20(2)                                        --------
-------->ARR11(3)   <---------AHL20(2)                                                      <-------
------->RVE1(1)     --------->AHL20(2) <-------TEIL---------->DOF2                   ---------->DOF2
-->GT1<---------AHL20(2)     ----------->GT1    --------->AHL20(2)         --------->MYB52(1) <-----
 
aaaatctaattaattgcacctatataattgtatactaaaaaatacatagaattaaaaagaataagtttgacaaaaaaaaaacgaataacaaagaatatat  5263100
                                           <---------SPL7
                                          <---------ANAC58
                                          <---------ANAC58
                                          <---------ANAC55(2)
                                          --------->ANAC55(2)
                                         --------------->AtSPL3
                                         <---------------AtSPL8
                                         --------------->AtSPL8
         <---------ICU4              --------->YAB1
       <---------AHL20(2)        <---------AHL20(2)                                               <-
      --------->YAB1          <---------ICU4 ------->TEIL                                     ------
   ------>ZmHOX2a(1)         --------->AHL20(2)  ------>MYB46(1)               <---------YAB1 <-----
-----AHL20(2)               --------->ARR11(3) <---------MYB59               <-----------GT1  <-----
--->AHL20(1)                <---------ARR11(3) <---------MYB46(2)    <----------DOF2          <-----
--ARR11(3)             --------->AtLEC2 <-----------GT1   <-------TEIL   <---------YAB1     <-------
->ARR11(3)    <---------WOX13(1) <-----------GT1 ------>MYB83     --------->ARR11(3)  ------>ZmHOX2a(1)
--AHL20(1) <---------YAB1   --------->AHL20(1) <---------MYB111(1)<---------ARR11(3) --------->TOE2(3)
----AHL20(1)--------->ATHB12<---------AHL20(1) --------->MYB46(3)<---------CCA1(2)   <---------ANAC46
 
attttcctataatattgattggagccatgaaaatatttacttataacgtaccaaacaaatatacatatatatctttgttattaccattccttatattact  5263200
                                                                                 <---------AHL20(2)
                                                                                <---------AHL20(1)
                                                                                --------->AHL20(2)
                                                                          ------>ZmHOX2a(2)
                                                                         <------ZmHOX2a(2)
                                                                        --------->ARR14(2)
                                                                        --------->ARR11(3)
                                                                  --------->HSFB2a(2)
--------YAB1                                                <---------AHL20(2)  <---------AHL20(2)
--->ANAC55(2)                                            <---------AHL20(1) ------>ZmHOX2a(1)      <
----ANAC55(2)                                            <---------AHL20(2)<---------MYB59        <-
----ANAC58                                 <----------DOF2<---------YAB1<---------ARR11(3)       <--
----ANAC58 --------->ANAC58   <---------ARR14(2)       <---------YAB1   <---------ARR14(2)--------->GLK1(2)
----GT1    --------->ANAC58   --------->ARR14(2)<-----------GT1   <---------HSFB2a(2)    <---------GLK1(2)
 
tactataggttaacaagcctacattcacatgggtatctagggtttactttgttactctattatttttttctagtagatcctaattttttttagattctat  5263300
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AGI:  At5g16110.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02555.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96917.1)
Range:  from: 5260607    to: 5262843    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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