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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
AGP1
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
AGP1
-------->
HAHB4
<---------
ARR14(2)
--------->
ATHB12
--------->
DAG2
<---------
YAB1
--------->
MYB52(1)
<---------
CCA1(2)
<---------
ATHB12
----------->
RAV1(1)
------->
GAMYB
---------->
DOF2
--------->
ICU4
-->
AHL20(2)
--------->
MYB46(3)
--------->
AHL20(2)
--------->
YAB1
atagaacaacacagagaagttttgactcgaattcaaccaagactcaaaaaacgatgggaattaaaaaagcacagatctaacatctatgagaaatgattgt
5262400
--------->
AtLEC2
------>
NtERF2
--------->
LBD16
--------->
ANAC58
----------->
GT1
--------->
ANAC46
--------->
DAG2
--------->
ANAC58
>>>>>>>>>
TBF1
---------->
DOF2
<---------
ARR14(2)
>>>>>>>>>
TBF1
--
----------->
GT1
--------->
ARR14(2)
>>>>>>>>>
TBF1
<-----
--------->
DAG2
----------->
GT1
--------->
MYB52(1)
<------
---------->
DOF2
------>
ZmHOX2a(2)
---------->
DOF2
>>>>>>>>>
TBF1
<------
ZmHOX2a(1)
---
ggatgaacaaaaggtaaagtaacttcgatctgtaaaatccgccatgaaaggaacttaagaaacgaagaagaagaagaagaaggagaatgagagagagatg
5262500
--------->
LBD16
<---------
LBD16
<---------
HSFB2a(2)
<---------
ARR11(3)
--------->
RVE1(1)
----------->
GT1
--------->
CCA1(2)
--------->
RAV1(2)
<------
ZmHOX2a(1)
<---------
ANAC46
----
REM1(1)
<---------
LBD16
--------->
MYB52(1)
-----------------
TaNAC69(2)
----------->
HVH21
--
---->
TEIL
--------->
ARR11(3)
----------->
TGA1
---------->
DOF2
-----------
tac
ctgagtaaaaatctccgggagaggagagagagagaacgatgacggagaagatagaagaaagagagagagagagagagagagagagagaggcgaaaaa
5262600
<---------
LBD16
<---------
ANAC58
<---------
ANAC46
<---------
AtMYB61
<---------
ANAC58
<---------
YAB1
<---------
MYB46(3)
<---------
HSFC1(2)
<---------
ARR14(2)
--------->
ALFIN1
--------->
HSFC1(2)
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
ALFIN1
------>
NtERF2
------->
TOE2(3)
<---------
AHL20(2)
<-----------
RAV1(1)
--------->
DEAR3(1)
>
GT1
<------
ZmHOX2a(1)
---------->
DOF2
---------->
DOF2
--------->
DEAR3(2)
tcgttagaggaaatggggattttataaaaggatgagaccgaagaaagtgtgggtgaggttgaagacaacat
gaaacgacgacgtttcgtggaattgggaa
5262700
<------
NtERF2
------>
NtERF2
--------->
DEAR3(1)
<---------
DEAR3(1)
<------
NtERF2
<---------
LBD16
<----------
DOF2
<---------
DAG2
--------->
ZAT18
<---------
ANAC58
<---------
ZAT6
------->
TEIL
<---------
ANAC46
--------->
YAB1
--------->
At4g35610
----------->
GT1
<---------
ANAC58
--------->
ICU4
<---------
At4g35610
-
<----------
DOF2
---------->
DOF2
<---------
DEAR3(1)
--------->
ETT(2)
--------->
AtLEC2
tttttgctttaaaaacaaaatagtatatcaaactggaaagttgctttttctcggcgtcgtaatagtgatatttgtggacagcttaattttcatgcatttc
5262800
--------->
ARR11(3)
--------->
ATHB12
<---------
ICU4
<---------
YAB1
<---------
ATHB12
--------->
ICU4
<---------
TOE2(3)
<---------
ICU4
<------------
MYB.PH3(2)
<---------
YAB1
<-----------
GT1
*
TSS
--------->
YAB1
--------->
ANAC46
<---------
ICU4
<---------
YAB1
--------->
ANAC55(2)
<---------
WRKY12
<---------
GLK1(1)
<---------
YAB1
<----------
DOF2
<---------
WRKY38(1)
<-----------
GT1
<-
--------->
AHL20(2)
<----------
DOF2
--------->
ICU4
<----------
DOF2
--------->
GLK1(1)
<---------
ICU4
<---------
ARR11(3)
<---------
WRKY45
--------------->
AGL15
<---------
ARR11(3)
-------->
ICU4
--------->
ARR11(3)
--------->
WRKY18(1)
<---------------
AGL15
--------->
ARR11(3)
taatttttataagtaactatctttctctttattctattggtca
acattactaatgattttgttttctctttttagtttttaacatcagatatcattctct
5262900
<---------
AHL20(2)
--------->
ATHB12
--------->
ATHB51
-------->
HAHB4
<---------
ICU4
<---------
MYB52(1)
-------->
ATHB1
<---------
YAB1
<---------
ATHB51
-
<---------
GLK1(1)
--------->
ICU4
<
--------->
GLK1(1)
<---------
ICU4
-
--------->
TOE2(2)
--------->
ANAC46
--
<----------
DOF2
<---------
ARR11(3)
<-----------
GT1
---------
---------->
ID1
--------->
TOE1(2)
--------->
MYB52(2)
<---------
YAB1
<------
MYB83
---------->
ID1
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
--------->
ICU4
<------
MYB46(1)
<----------
DOF2
<-----------
GT1
--------->
YAB1
--------->
TOE2(3)
--------->
ANAC55(2)
--------->
MYB46(2)
-----------------------
ANAC81
<-----------
GT1
--------->
ARR11(3)
<---------
ICU4
--------->
MYB59
tgttttctctttttttggtgtttttttttcttttttcctctaacataagatatcattccttagttgataatttcacataattattgtttttgtttggtaa
5263000
------->
TEIL
<---------
AHL20(1)
--------->
AHL20(1)
<----
--------->
AHL20(2)
------
-------->
GLK1(2)
<-------
---------
ARR11(3)
<---------
YAB1
--------->
AHL20(2)
--------
-------->
ARR11(3)
<---------
AHL20(2)
<-------
------->
RVE1(1)
--------->
AHL20(2)
<-------
TEIL
---------->
DOF2
---------->
DOF2
-->
GT1
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
--------->
MYB52(1)
<-----
aaaatctaattaattgcacctatataattgtatactaaaaaatacatagaattaaaaagaataagtttgacaaaaaaaaaacgaataacaaagaatatat
5263100
<---------
SPL7
<---------
ANAC58
<---------
ANAC58
<---------
ANAC55(2)
--------->
ANAC55(2)
--------------->
AtSPL3
<---------------
AtSPL8
--------------->
AtSPL8
<---------
ICU4
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<-
--------->
YAB1
<---------
ICU4
------->
TEIL
------
------>
ZmHOX2a(1)
--------->
AHL20(2)
------>
MYB46(1)
<---------
YAB1
<-----
-----
AHL20(2)
--------->
ARR11(3)
<---------
MYB59
<-----------
GT1
<-----
--->
AHL20(1)
<---------
ARR11(3)
<---------
MYB46(2)
<----------
DOF2
<-----
--
ARR11(3)
--------->
AtLEC2
<-----------
GT1
<-------
TEIL
<---------
YAB1
<-------
->
ARR11(3)
<---------
WOX13(1)
<-----------
GT1
------>
MYB83
--------->
ARR11(3)
------>
ZmHOX2a(1)
--
AHL20(1)
<---------
YAB1
--------->
AHL20(1)
<---------
MYB111(1)
<---------
ARR11(3)
--------->
TOE2(3)
----
AHL20(1)
--------->
ATHB12
<---------
AHL20(1)
--------->
MYB46(3)
<---------
CCA1(2)
<---------
ANAC46
attttcctataatattgattggagccatgaaaatatttacttataacgtaccaaacaaatatacatatatatctttgttattaccattccttatattact
5263200
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
--------->
ARR11(3)
--------->
HSFB2a(2)
--------
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
--->
ANAC55(2)
<---------
AHL20(1)
------>
ZmHOX2a(1)
<
----
ANAC55(2)
<---------
AHL20(2)
<---------
MYB59
<-
----
ANAC58
<----------
DOF2
<---------
YAB1
<---------
ARR11(3)
<--
----
ANAC58
--------->
ANAC58
<---------
ARR14(2)
<---------
YAB1
<---------
ARR14(2)
--------->
GLK1(2)
----
GT1
--------->
ANAC58
--------->
ARR14(2)
<-----------
GT1
<---------
HSFB2a(2)
<---------
GLK1(2)
tactataggttaacaagcctacattcacatgggtatctagggtttactttgttactctattatttttttctagtagatcctaattttttttagattctat
5263300
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AGI:
At5g16110.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02555.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96917.1)
Range:
from: 5260607
to: 5262843
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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