Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------ANAC58                      <---------ANAC58                      <------MYB46(1)                      <------MYB83                     <---------AtMYB61                     --------->MYB46(2)                     --------->MYB55(2)                     <---------MYB46(3)                     --------->MYB52(2)                     --------->MYB111(1)                                            --------->GLK1(2)            <---------AHL20(2)               ------>ZmHOX2a(1)                      --------->ARR14(2)            <---------YAB1               <-----------GT1                            <---------ARR14(2)           --------->AHL20(2)       <---------AHL20(2)                         --------->ANAC58           --------->AHL20(1)       --------->AHL20(2)                         --------->ANAC58 -----ZmHOX2a(1)     --------->MYB111(2)--------->YAB1 --------->ZAT6          --------->ANAC46     < ---ID1    <---------AHL20(1)    <----------DOF2  --------->YAB1             <---------ALFIN1    ----   aggaatgaaacaatataataggtttggtgctcaagcttttaattatcctctctaataacactcagagaaaatgtaatctccacacaaatctgtgagcatt  5137200                                                                                           <---------AHL20(2)                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                <---------TOE2(3)                             <---------ARR14(3)                               ---------->DOF2                                --------->ARR14(3)                    <---------RVE1(1)            ------>ZmHOX2a(2)            <---------AGP1                   <---------ARR14(2)          <---------ARR11(3)             --------->AGP1  <---------ALFIN1 --------->ARR14(2)          --------->ARR11(3)            <---------CCA1(2)  ----- -----------GT1    <---------ARR11(3)  <---------ZAT18        --------->At4g35610         --------->AHL20(2) ----->YAB1        <---------GLK1(2)   --------->ZAT18       --------->GLK1(2)<-----------ARR10------   aatcacacctcgaaaaacccagatttttagttttaaagtagcccacgatgatctcgacttaataatctgactaaaacccagatcttgctctattaaataa  5137300                                                                                 --------->HSFB2a(2)                                                                                 <---------HSFB2a(2)                           <---------AHL20(2)                              <---------------AGL15                           <---------YAB1                                  --------------->AGL15    --------->GLK1(2)      --------->AHL20(2)                             ----------------->AGL2   <---------GLK1(2) <---------TOE2(2)<---------WRKY38(1)            <---------ALFIN1 ----->DOF2          <---------TOE1(2)<---------WRKY12          --------->At4g35610 --->AHL20(2)       <-----------RAV1(2)                         <---------At4g35610   aagaagaatctctctctctctctcaggttttaattaagagtcaactttcaactctcaattgatggaagctcacacttccagttacagaaaaaatgacaca  5137400                                                                                              <------                                                                                             --------                                                                                        <---------DEAR3(2)                                                                                        <------MYB46(1)                                                                                        <------MYB83                                                                                       <---------MYB46(3)                                                                                       --------->MYB55(2)                                                                                       <---------DEAR3(1)                                                                                       <---------DEAR4(1)                                                                                      --------->SPL7                                                                                      <---------ORA47(1)                                                                                      ===============                                                                                      <--------P<----                                                                                      <---------MYB55(1)                                                                                     <-----------HVH21                                         <---------SPL7                         <---------ARR14(2)                                        --------->RAP2.6(2)               --------->LBD16    --------                                =========================================bZIP_DOF    <---------MYB52(1)                                ---------->DOF2                <---------O2 --------->REM1(2)--------                              <------ZmHOX2a(2)     --------->AHL20(2)   <---------ANAC46 --------->ALFIN1                          <------ZmHOX2a(2)--------->SPL7   <----------ARF1--------->ALFIN1  --------                       <---------ANAC58--------------->AtSPL3  ================================MYC_MYB     <----------DOF2   <---------ANAC58--------------->AtSPL8  <---------TGA1a  --------->ARR14(2)---   gagaaggctttgaaattcagcaatggcgatcgatcaaagtagccgtacaaaaaaaaaaatgggagacgagagtctccgtggagaaccggtcggtgttgac  5137500                                                  ----------->GT1 ---WRKY18(1)       <---------DEAR3(1)          ----------->GT1 --->HVH21        <-----------HVH21            --------->ALFIN1 ==========================MYC_MYB           --------->ALFIN1 -----LBD16      ==================================================bZIP_DOF ->WRKY38(1)     <---------TGA1a             <---------ANAC46       <---------KAN4(2) ->WRKY45        --------->TGA1a       <---------GLK1(1)     --------->CCA1(2) ->WRKY12>>>>>>>>>TBF1<------NtERF2   --------->ARR11(3)    <----------ID1            <---------DAG2 ------>LBD16  <------ZmHOX2a(1)      <---------ARR11(3)---------->DOF2               <----------DOF2   cggagaaggaagaagaaggacgtcggagaaatagggagaagatttcggtgtggagaaaaaaagagacaagaatgtgcaaatttcagaacttttttctacc  5137600                                                         <---------ANAC46                                                         <---------ANAC58                                                         <---------ANAC58                                                       --------->ZAT14                                              <------NtERF2              <----------DOF2                                            --------->ETT(1)             <---------DAG2     <--------           ---------->DOF2   *TSS   <----------DOF2    <---------ZAT14<-----------GT1       ---------   <------ZmHOX2a(1)      <---------TOE2(3)--------->RAP2.6(3)    --------->YAB1            ---------  ----------->GT1      <----------DOF2   <-----------RAV1(1)    <-----------TBP             <--------   aaggaggaaaaaaaaaagaagcagtctttaggtttcttcttttttgtcggcaaaaactggagtgtcatttataaactttttttttacagagaaatatttt  5137700                                                                <---------AHL20(2)                          <---------AHL20(2)                    --------->AHL20(2)                        <---------AHL20(2)                     --------->AHL20(2)                       <---------ARR11(3)                   <---------AHL20(1)                       --------->ARR11(3)                   --------->AHL20(1)                       --------->AHL20(1)                   --------->AHL20(2)                       --------->AHL20(2)                   <---------AHL20(2)                     <-                       <---------AHL20(1)                  <---------AHL20(2)                      --                       <---------AHL20(2)              <---------AHL20(2)                   <--------                      --------->AHL20(2)               --------->AHL20(2)                 <---------- -ARR11(3)        --------->AHL20(2)                 <----------DOF2                      ----------- >ARR11(3)       <---------AHL20(2)               <---------ARR11(3)     <-------TEIL    <----------- >AHL20(1)      --------->AHL20(2)         ---------->DOF2 --------->AHL20(2)      <---------AHL20(2) -AHL20(1) ------------>CBF <---------AHL20(2)    --------->ARR11(3)--------->AHL20(2)   <-----------   ttgtaatattctttgcaatttaaaatatattttttgatacagagccaaagtagacctttaattaaatttataaaatacattgtattattttgctattagt  5137800                                                                                 <-------TEIL                                                                              ------>MYB46(1)                                                                              ------>MYB83                                                                            <---------MYB59                                                                         <---------WRKY18(1)                                                                        --------->WRKY12 --------ARR14(2)                                                      <---------WOX13(1) ------->ARR14(2)                                     <-------TEIL    <-------GAMYB -YAB1 ----------->GT1                             ----------->GT1   <---------MYB46(3) -----AGL15                                       --------->ANAC58  <---------YAB1      --------->ANAC58 ---->AGL15                                       <---------------AtSPL8--------->WRKY45--------->ANAC46 ------AGL3        <-------TEIL                   --------->ANAC58  <---------TOE2(3)   --------->ANAC58 ------AGL2    <-------TEIL    ------->TEIL       --------------->AtSPL8--------->WRKY38(1)         <   ggatatgtatagttatatacatacacttatatgtattttggataacttaaacaaggtacaaatttgaattttggttgaccaaatacattcaagctatttt  5137900                              <---------AHL20(2)                             <---------AHL20(1)                             --------->AHL20(1)                             --------->AHL20(2)                             --------->ARR11(3)                             <---------AHL20(2)                             <---------ARR11(3)                            <---------------AGL15                           <-----------------AGL3                          --------->AHL20(2)                         <---------AHL20(2)                         --------->AHL20(2)                        <---------AHL20(2)                     --------->AHL20(2)                  ----------->GT1            <---------HSFB2a(2)          --------->AHL20(2)            ----------->RAV1(1)            --------->HSFB2a(2)        ----------->GT1              --------->ANAC46         <-----------GT1--------->AHL20(2)    --------->MYB52(1) >>>>>>>>>RAP2.2 ---------TOE2(3)----------->GT1      ----------->GT1         <---------CCA1(2)    <--------P   ttaagttttattttccagagggataaattaatatatttggaagttaaataacagagtttcagttatatctaaaccacattagcaggttgcccctagacta  5138000                                                    --------->ANAC58                                                    ----------->GT1    --------->ANAC55(2)                                       ---------->DOF2                 <---------ANAC55(2)                                     --------->LBD16--------->ANAC58 <-----------GT1                                    --------->HSFB2a(2)              --------->AHL20(2)                                    <---------HSFC1(1)     <---------AHL20(2)      <-------TEIL         --------->ANAC58           --------->HSFC1(1)--------->AHL20(2)       >>>>>>>>>MYB98         --------->ANAC58           <---------HSFB2a(2)    --------->AHL20(2)<-----------GT1   actctgtcattaagcaaaactaatccacaagttaacttccagaaagtatttgacaagaaaataaaatcaaattacatatttaacatacataaatatgtgt  5138100  Previous    Next  AGI:  At5g15740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G02250.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96934.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49221.1); similar to hypothetical protein [Cleome spinosa] (GB:ABD96844.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 5134530    to: 5137629    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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