Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <------MYB46(1)                                     --------->TOE2(3)                           <------MYB83                                    <---------YAB1                          <---------HSFB2a(2)                                   -------->P                              <------MYB46(1)                                  <-----------GT1                          <------MYB83                               <-------TEIL   --------->CCA1(2)           --------->ALFIN1 -->AHL20(2)               --------------->AtSPL3      <------ZmHOX2a(1) <--------P<--------P ---AHL20(2)--------->MYB59<---------------AtSPL3     <----------ID1     --------->ALFIN1 >GT1--------->YAB1        <---------------AtSPL8   <------ZmHOX2a(1)  <---------MYB46(3)   tttgtaatcaaattttggtaagagggagagaggtacttaccatagaagagatgaggaggacaagaggggagagaggttggggaaggtaagtgatgagcat  4915500                                                                             --------->ARR11(3)                                                                        --------->ATHB12                                    <------ZmHOX2a(1)                   --------->ATHB51                        --------->ANAC58                             <---------ICU4            ------                        --------->ANAC58                            --------->ICU4          ------>ZmHOX2a(1)             <---------ANAC46--------->ICU4                         <---------YAB1     <----------DOF2            --------->At4g35610   <---------TOE2(3)          ------>ZmHOX2a(1)        <---------ANAC58   <---------AtLEC2   ---------->DOF2---------->DOF2 --------->TOE2(3) <---------YAB1 <---------ANAC58   tgtcttcatggagttgctgaaacatgaagccatgttgaggaaaggccatctccaatctcagtccttcttgattattattgatattgttcctttcctcctc  4915600                                                                                                  <--                                                                                                <----                          ------->TEIL                                                       <-------                  --------->AHL20(2)            ----------->RAV1(1)                          <-------                  <---------AHL20(2)           --------->ZAT18                       <------ZmHOX2a(2)                 <---------YAB1           ---------->DOF2                       <---------At4g35610              <---------AHL20(2)   <---------ALFIN1                      <---------GLK1(1)<----------DOF2              <---------YAB1       --------->ANAC46                 --------->YAB1  <---------ARR14(2)          --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------YAB1  --------->At4g35610     <-------TEIL--------->ICU4  --------->ANAC46               <---------YAB1  --------->At4g35610 >ZmHOX2a(1)  --------->AHL20(2)<---------REM1(2)     <---------ATHB12<---------YAB1--------->ARR14(2)   atacatatacatatatataattaatatgtatgtatacacaccctcaaagcccacaaatgatcaactcttattatgaattctgagcagatcaactttcgta  4915700                    --------->ARR11(3)    <------ZmHOX2a(2)                  <-------GAMYB                                               <-   --------->ARR11(3)                <------ZmHOX2a(2)                             <------ZmHOX2a(1) -------ANAC46      <---------ARR11(3)------>ZmHOX2a(2)                      >>>>>>>>>TBF1       <--- -----TOE1(2)      <<<<<<<<<RAP2.2  <---------ARR11(3)                     ------------------------>ANAC81 --ANAC58--------->ARR11(3)         --------->ARR11(3)           <---------ZAT6    ================== --ANAC58<---------ARR11(3) <---------ARR11(3)         ----------->GT1<xxxxxxxxxxxxxxxxsmallRNA(s) ==   gcttagatcaagaacttgtttagatatcaatatcacaagatcgttgaagttttctgaaggaaaattagtgagaagagaagaagaaggagaagaaggaaga  4915800                                    <-----------GT1                                <----------DOF2                            ------>MYB46(1)                                                     <----                            ------>MYB83                   <-------MYC2                         <----                          --------->MYB46(3)               ------->MYC2                         -----            <------MYB83  <---------MYB55(2)               <-------MYC3                         -----            <------MYB46(1)<---------ALFIN1               <----------TaMYB80                   *TSS -----ZmHOX2a(2)        <---------TCP15(1)               ---------->TaMYB80<---------YAB1    <------- ------GLK1(1)          --------->PCF2          <----------DOF2         ============================= =====HOX2a_HOX2a      <------ZmHOX2a(1)     <---------TOE1(3) <---------YAB1               <------ZmHOX2a(1) =============================HOX2a_HOX2a   <-----------GT1------->MYC3 <----------DOF2    --------->ANAC46   gatcagttcatgggaggtttgtataggacccaccctttataccatttaagcttttagggcatatgctgatttttcttttgattcaatttgtataggacac  4915900                                                 <-------TEIL                                             ------->TEIL                                             <-------TEIL                                          --------->ANAC55(2)                                          <---------ANAC55(2)       <---------AHL20(2)                <---------------AtSPL3       --------->AHL20(2)                <-------TEIL                  --------->ARR14(2)      --------->AHL20(2)    ------->MYC3 --------------->AtSPL3        <---------ARR14(2) -----O2                    <-------MYC3 <---------------AtSPL8     --------->ANAC55(2) -----TGA1a        <---------AHL20(2)  <---------ARR14(2)  --------->ANAC46 ---->O2  <------------CBF  <-------MYC2 --------------->AtSPL8   --------->AHL20(2)     ------------ ---->TGA1a       --------->AHL20(2)   --------->ARR14(2)  --------->bZIP60(2)        <---------YAB1 --ZAT18<---------YAB1      ------->MYC2 <-----------------------TaNAC69(2)   <---------AHL20(2) =====bZIP_DOF    <---------AHL20(2)<---------TOE2(3)  <-----------GT1<---------CCA1(2)  <-----------   ttgggaaattaaaattgaaattaaatagcacatggattatggatacgtacatacattttccacttcatttacatatctgtttaatcttatgctactaata  4916000                                                                                                   --                                                                                                  <--                                                                                               <-----                                                                                             --------                                                                                             <-------                                                                                             <-------      <---------At4g35610      <-----------GT1                                               -------- <---------At4g35610       --------->YAB1                                                   <-------- --------->At4g35610       --------->AHL20(2)                                          --------->ANAC46 <---------ZAT2   --------->AHL20(1)                                         <----------DOF2--------- --------->ZAT2   --------->ARR11(3)         <---------At4g35610  --------->AHL20(2)   --------->ANAC58 --->AGL15        <---------ARR11(3)------>MYB83     <-----------GT1   --------->AHL20(2)   <-------- ----AGL15       --------->AHL20(2) ------>MYB46(1) <-----------GT1  --------->TOE2(3) --------->ANAC58   gacagcttagcttatacaaatatatacaattataaaccaactaatacaactgatttaacattcttcaattacattaattcttttgtttcacacaatcatt  4916100     <---------ICU4 ------>ZmHOX2a(1) ========================HOX2a_HOX2a =========================HOX2a_HOX2a ------->YAB1 -------YAB1 ----YAB1 >ATHB1                      <-----------GT1 -HAHB4            ------>ZmHOX2a(2) --ICU4           <------ZmHOX2a(2)                          --------->ICU4     ----------->GT1 ->YAB1          <---------ARR11(3)                        ---------->DOF2  <---------ARR11(3) -ATHB12         --------->ARR11(3)                  <---------YAB1         --------->ARR11(3) >ICU4           <---------AGP1                    --------->CCA1(2)        --------->GLK1(2)    <--- -YAB1          <---------CCA1(2)               --------->ANAC46      ----------->GT1           -----   atcctaatattcacacttagatctcgcgattcaaccatatatcatcttctacgatatgatataaagattagttcgaaaaatctagtttaaaattttgaga  4916200                                           --------->TOE2(3)                                           --------->ANAC46                                        -------->P                                      ====================HOX2a_HOX2a                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)           ----------->RAV1(1)                                     =====================HOX2a_HOX2a                                    --------->ARR14(2)          <------NtERF2                                    --------->AGP1              --------->ATERF1(1)  <---------ICU4                                    <---------AGP1 ------>ZmHOX2a(1)<----------DOF2 <---------YAB1                                    --------->ARR11(3)        --------->ANAC46     --------->TOE2(3) ---ZmHOX2a(2)                      <-----------ARR10    <---------ARR14(2)       --------->YAB1 ---->ARR11(3)                      <---------ARR11(3)   --------->ARR14(2)      <---------YAB1  <---   tcaaggagaaacttttaaaactctgttctaaagttttagatctaccctcaatcctcgaatataggcgcagcattaggggatttatcatcaatgctagtag  4916300                        --------->AHL20(1)                        <---------AHL20(1)                        <---------AHL20(2)                       <---------AHL20(2)                    <---------AHL20(2)                    --------->AHL20(2)                                          <---------AHL20(2)                    --------->AHL20(1)                                         <---------AHL20(2)                    <---------AHL20(1)                                         --------->AHL20(2)                   --------->AHL20(2)                                         --------->YAB1           --------->ANAC58                                                 ------->TEIL          <---------ZAT18                                                <---------YAB1          --------->ZAT18<---------AHL20(2)                            --------->YAB1              --          --------->SPL7--------->AHL20(2)                             <---------ICU4             ---          <-------TEIL --------->AHL20(2)        --------->TOE2(3)    <---------ATHB12           <---        --------->ARR14(2)                 --------->TOE2(3)     --------->ANAC58         <---------At4g35610        <---------ARR14(2)               <-----------GT1         --------->ANAC58         --------->At4g35610 ------ZAT6--------->ANAC58       <---------TOE2(3)    <<<<<<<<<EIN3  --------->ICU4    <-----------RAV1(2)   tgttggaacgggtacgctcgaataaattaatttgttatggatttttcttaacatcaatgtatagggcatgaaatcatgaattttaatttttcaggtgtaa  4916400  Previous    Next  AGI:  At5g15150.1    Description:  ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3); DNA binding / transcription factor. Identical to Homeobox-leucine zipper protein HAT7 (HAT7) [Arabidopsis Thaliana] (GB:Q00466;GB:Q0WNS2;GB:Q9LXG6); similar to ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G01220.1); similar to homeobox protein [Gossypium hirsutum] (GB:ABO47743.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Helix-turn-helix motif, lambda-like repressor; (InterPro:IPR000047); contains InterPro domain L Range:  from: 4913702    to: 4915895    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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