Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->GLK1(2)                                                              --------->ARR14(2)                                                              ------->TEIL                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ----------->GT1                 <------------------------ANAC81  --------->YAB1   <---------ZAT6               <----------DOF2               <---------ARR14(2)         <---------ANAC46   <---------ANAC46          <---------AHL20(2)               <---------ARR11(1)         ----------->GT1 -->RAP2.6(3)            <------------------------ANAC81     <---------ARR14(1)    <-----------GT1 -- --ARR14(2)           <-----------GT1<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ----------->GT1<---------ZAT6 ->ARR14(2)--------->MYB52(1)<-----------GT1              <---------At4g35610     --------->AHL20(2)   gcctagtgtgaaaaaacagaaatttttctattttctttttttttttttttttttttttgcagcgaatctataatacatgtaaaattaactagtgtgaaaa  4813800               --------->ANAC55(2)               <---------ANAC55(1)               <---------ANAC55(2)               <---------ANAC46               <---------ANAC58           ------>ZmHOX2a(2)          <------ZmHOX2a(2)         <---------ARR14(2)         <---------ARR11(3)                                             --------->YAB1            ---         --------->ARR11(3)                                            --------->ZAT6             ---         <---------AGP1                                              -------->HAHB4               <--         --------->ARR14(3)                                          --------->YAB1               <--         <-----------ARR10                                        --------->YAB1 --------->ANAC46 ---         <---------ARR14(3)                             ------->TEIL<---------YAB1                <--         --------->ARR14(2)          <---------------AGL15       <---------YAB1  --------->ANAC55(2)     ---------->DOF2       --------->ANAC46 ----------->GT1     --------->AHL20(2)  <-----------GT1-- --------->GT1 <---------ANAC58      --------------->AGL15  <---------YAB1    <---------AHL20(1)-----   aatgttacaaagatcttacgtgaatttcgacacaatcacctatatatagtcaaaaatgaattttgatataataatactaatatacttaaccatataaaaa  4813900             --------->TOE2(3)             <---------HSFB2a(2)      --------->KAN4(2)                                                                  --------->YAB1 ------>ARR11(1)                                                                         <---------ICU4 ------>ARR11(3)                                                                        <---------YAB1 -------ARR11(3)              <---------ALFIN1                                          <---------ATHB12 -------ARR14(2)             <------NtERF2                                         --------->YAB1 ------>ARR14(2)           --------->PCF2                                      <---------MYB52(1)   < -------GLK1(2)            <---------TCP15(1)                                 <-------GAMYB      ---- ------->CCA1(2)   ---------->DOF2                                     <-----------RAV1(1)    <------ ------>ARR10--------->HSFB2a(2)              <------ZmHOX2a(1)    <---------YAB1  --------->TOE2(3)<   gatttgcacattcttccataacaaagaaggccccactaattttcttaaggagtatgttattttgcagttatatttgtggcagttatcttaatcattcttt  4814000                                                                            ------->TEIL                                                                        --------------->AtSPL8------- ---------TOE2(2)    ------>ZmHOX2a(1)                           <----------DOF2           --------->YAB1 ----->YAB1      <---------ARR14(2)       <---------ARR14(2)    <---------DAG2  ------------>CBF ----DOF2        --------->ARR14(2)     <---------MYB46(3)   <---------ALFIN1 --------->TOE1(3) ---------TOE1(2)<-----------GT1   <----------DOF2  <-----------RAV1(1)<----------DOF2    --------->AHL20(2)   catatgttttgtctgtgtgtttcctctctctctctctctttgtggttcttgattttgttggccaaaccttttcctttgtaccttcaatgccattaatcac  4814100                                            <---------AHL20(2)                                            --------->AHL20(2)                                 ------------>CBF                                --------->TOE2(3)                             --------->MYB52(1)        <----------DOF2                            ------>ZmHOX2a(1)       <---------ALFIN1                     --------->DAG2        --------->AHL20(2)   ---------->DOF2  ---------->DOF2--------->WOX13(1)  <---------DAG2                          <----- -->YAB1--------->GLK1(2)  <---------MYB59 <---------AHL20(2)--------->LBD16    <----------DOF2------   aaacccaaagaatccatagagaaaaagttcctaacgtcaatcgaattaaattccccacttttccacaaaaactaaatcgcatcttttgaagtttctcatc  4814200                                                                                 ----------->GT1                                                                                <---------TOE1(3)                                                                                <---------TOE2(3)                                                                          --------------->AGL15                                                 ------>ZmHOX2a(2)       ============================                             <-------TEIL      ------->TEIL              <-----------------AG                            --------->CCA1(2)  <---------ARR14(2)        <-----------------AGL2                      <----------DOF2          <---------AGP1         --------->GLK1(1)                   --------->ARR11(3)          --------->ARR11(3)     <---------GLK1(1)      ----------->GT1------>ZmHOX2a(2)         <---------ARR11(3)  --------->ANAC46 ----At4g35610     <---------ARR11(3)          --------->ARR14(2)  --------->ANAC58    <---------AHL20(2) --->At4g35610 <----------DOF2          ------------>CBF           --------->ANAC58   --------->AHL20(2)   tcccaaaaatgttattcctttgatctttagatacaaaacccattcaatggatctcgagcgtctaagcccaagaaatccagttaaggtataaaattctcaa  4814300                                 --------------->AGL15                                 <---------------AGL15                                ----------------->AG                                <---------ANAC58                            --------->ARR14(2)                                <-----------------AGL2                      <---------ARR14(2)                                ----------------->AGL2                    <---------HSFC1(2)                                <-----------------AGL3                    --------->HSFC1(2)                                ----------------->AGL1                    --------->HSFB2a(1)                                <-----------------AG                      <---------HSFB2a(1)                       <----------DOF2                                    <---------DEAR3(2)                   <----------DOF2                                       <---------DEAR3(1)               <----------DOF2  <---------ANAC46                      <---------SPL7    <---------ANAC58               ------>ZmHOX2a(1)<---------ANAC58              --------->ARR11(3)        <---------ANAC58             <---------ICU4     <-----------------AGL1        --------->GLK1(2)        --------->At4g35610       --------->TOE2(3)   --------->MYB52(2)            ---------->DOF2<---------ORA47(1)    ------- ================================================MADS_MADS   <---------GLK1(2) ----------->HVH21   tattcaattccataatcctttctttcttttagttgcttaaattggtaatggtttttgcagaaagaatcttggtggacggttctgacattagcttaccaaa  4814400                                                                                                  <--                                                                                                 ----              --------->LBD16                                                                   <----             --------->ANAC46                              --------->At4g35610                 <-----     --------->ZAT14                                   <---------DAG2                          ------    <---------REM1(1)                                  <----------DOF2                         ------  <---------ANAC46                                 <---------ZAT18          --------->GLK1(2) ------- <---------AtMYB61--------->ARR11(3)       <---------ETT(2)<---------At4g35610        --------->MYB52(1) --->DOF2   <---------LBD16     <---------YAB1     --------->ZAT18         <---------GLK1(2)  <------   gcttaggtgtagtctacggagatttagcaacttcaccattgtatgtctacaagagcacttttgctgaagacataacacattctgagacaaacgaagagat  4814500                                                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                                                  <---------ICU4 --------DOF2                                                                    <---------YAB1 -->ZmHOX2a(2)                                                                 --------->YAB1 --ZmHOX2a(2)                                              <---------AHL20(2) <---------YAB1 ----ARR11(3)                    <----------DOF2      <---------ANAC55(2)   <---------At4g35610 --->ARR11(3)                    --------->TOE2(3)    --------->ANAC55(2)  --------->ICU4          <- --->AGP1             --------->HSFB2a(2)    ----------->GT1          <---------ANAC58    <---------AtMYB61 -->GLK1(1)           <---------HSFB2a(2)<---------ALFIN1  <---------YAB1<---------At4g35610 -------- ---GLK1(1)    <---------CCA1(2) --------->TOE1(3)   <-------TEIL     <---------ANAC58 <---------REM1(1)   ctttggtgttctgtctcttatcttctggacattaactttaatcccacttgttaaatacgtttttattgttcttcgtgctgatgataatggtgaaggtggg  4814600                          <------NtERF2                                     <----------DOF2                         ------>NtERF2                                  <------ZmHOX2a(1)          --                        <---------ETT(2)                       <---------At4g35610                 <-                        --------->ETT(2)    <----------DOF2<---------At4g35610                    <--                       ---------->ID1   <---------At4g35610--------->At4g35610                    <-- ---------DOF2       <-----------RAV1(1)--------->At4g35610--------->ZAT2--------->ARR11(3)      <--- ->ALFIN1     <----------DOF2--------->AtLEC2              <---------ZAT2<---------ARR11(3)    ------   acttttgctctctactctttattatgtcgccatgctagaatcagctctttgcccaatttccagctcgctgatgaggacctttctgagtataagaaaaatt  4814700  Previous    Next  AGI:  At5g14880.1    Description:  potassium transporter, putative. Identical to Potassium transporter 8 (POT8) [Arabidopsis Thaliana] (GB:Q9M7J9;GB:Q9LEQ2); similar to KT2 (POTASSIUM TRANSPORTER 2) [Arabidopsis thaliana] (TAIR:AT2G40540.2); similar to KUP6 (K+ uptake permease 6), potassium ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G70300.1); similar to KT2 (POTASSIUM TRANSPORTER 2), potassium ion transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G40540.1); similar to putative potassium transporter HAK1p [Mesembryanthemum crystallinum] (GB:AAK53758.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75895.1); similar to putative high-affini Range:  from: 4814247    to: 4817670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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