Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->TOE2(3)                                                           --------->WOX13(1)                                                        --------->TOE2(3)                                                      <------ZmHOX2a(2)                                                     <---------ARR14(3)                                  -------->P         <---------ARR11(3)                                 ------->GAMYB       <---------ARR14(2)        <---------ARR14(2)      <---------MYB111(2)  --------->ARR14(3)                           ---        --------->GLK1(2)       --------->MYB46(3)   --------->ARR11(3)                         -----        --------->ARR14(2)    <-----------GT1        --------->ARR14(2)                         ----- ---TOE2(3)                <----------DOF2  <---------AHL20(2)--------->YAB1                    ----- ---TOE1(3)            <----------DOF2<-----------HVH21------>ZmHOX2a(2)        --------->AtMYB61 <--   tttcacagagaatatgacaacatcgctttctttaacaacctgtcatttttttgaagatcgtcaatctcaatttagttcatcaccacaacaacaacaacaa  4787400                                                                                                   --                                                                                             --------                                                                                             <------NtERF2                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           --------->ALFIN1                                                                                           <---------DEAR3(1)                                                                                           <---------DREB2C(2)                                                    --------->ARR14(2)                    <---------ABI4(1)                                                    <---------ARR14(2)                <---------DOF5.7(2)          <---------ARR11(3)                       <------ZmHOX2a(1)                  --------->MYB52(1)          --------->ARR11(3)                   ---------->DOF2                --------->CCA1(2)<-----      ---------->DOF2                       ------>NtERF2                  <---------TOE2(3)<-------- ------>ARR11(3)                           --------->ANAC46            <-------GAMYB <---------ZAT14 ---->ANAC58                               --------->ANAC58           <---------MYB46(3)<---------DEAR3(1) ---->ANAC46                               <----------ID1       --------->MYB52(1)   --------->ZAT18 ---->ANAC58                               --------->ANAC58    ----------->HVH21     --------->ZAT14 -------ARR11(3)                    --------->ARR11(3)        <-----------HVH21   <---------ANAC46 <-   gacattgaaaaagaacttacttcttcgctagtggagaagacattgacgccaaaggattcgaagacatcacggcgattgagatttgagtgaacggcggtgc  4787500                                 --------->ANAC46                               <---------ALFIN1                               ------->GAMYB                                                        <                               --------->AtMYB61                                                    <                         --------->ANAC58                                                           -                         --------->ANAC58                                         --------->TOE2(3)<- ------->ARR14(2)     --------->LBD16                            <---------ZAT2 ------>MYB83      --- ->At5g28300        <---------LBD16                              --------->ZAT2 -------->P       ---- -ATERF1(1)        --------->MYB52(1)                            <---------At4g35610             ---- -ORA47(2)        <---------ALFIN1                               --------->At4g35610             ---- -MYB46(3)     --------->At4g35610                          <-----------GT1     ------>MYB46(1)------ -DEAR4(2)     <---------At4g35610                   ------>NtERF2             ------>ZmHOX2a(1)<---- --TEIL  <------ZmHOX2a(1)    --------->MYB46(3)     --------->LBD16       ------->TEIL        ------ -DEAR3(2)  <------ZmHOX2a(1)-------->P             --------->ANAC46  --------->At4g35610     ------- --------ARR14(2)--------->ZAT18 <---------ALFIN1  <---------LBD16--------->ARR14(2)          -------   atatacgattaggaggaagcacaccggaagcaaccacacctctagctatactctccgccattttaccagctccgatgaatcctaccttgaaactctccgc  4787600                                                 <---------HSFC1(2)         <---------ANAC58                                           <---------ANAC46                 <---------ANAC46                                           <---------ANAC58              xxxxxxxxxxxxxxxx>smallRNA(i)                                           <---------ANAC58             --------->ZAT2                                          <------NtERF2                 <---------ZAT2                                        <---------DEAR3(1)              <---------At4g35610                                      --------->At4g35610       <---------ZAT2                                      <---------ZAT2            <---------At4g35610                                      <------NtERF2             --------->ZAT2            <---------ZAT2                                      <---------At4g35610       --------->At4g35610       <---------At4g35610                                      --------->ZAT2          --------->ZAT18             --------->At4g35610                                     <---------DEAR3(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <---------ATERF1(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                     <---------RAP2.6(3)      xxxxxxxxxxxxxxxxxx>smallRNA(si3) ---------ARR14(2)                   ------>NtERF2            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---------GLK1(2)                   <---------RAP2.6(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------->ARR14(2)                  --------->ATERF1(2)     <-----------HVH21          <---------ANAC58 -----NtERF2                        <---------ATERF1(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------>LBD16                       <---------DEAR3(1)    <---------MYB46(3)<---------ANAC58 ----->RAP2.6(2)                  <---------ATERF1(1)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----->RAP2.3(2)    ----------->GT1--------->ATERF1(1)<---------SPL7    --------->At4g35610 ----->LBD16        --------->LBD16--------->RAP2.6(3)----------->HVH21xxxxxxxxxxxxxxxx>smallRNA(i) >NtERF2 <---------GLK1(2)      ------->GAMYB    --------->HSFC1(2)   xxxxxxxxxxxxxxxx>smallRNA(i) -----LBD16        <---------HSFB2a(2)--------->ATERF1(1) xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --->LBD16--------->ARR14(2) <-----------GT1 ----------->ARR10xxxxxxxxxxxxxxxx>smallRNA(i)--------->ZAT2 -->DEAR3(1)       --------->HSFB2a(2)----------->RAV1(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)-------- -->ANAC46--------->GLK1(2)  --------->MYB52(1)<---------ARR11(3) ----------->HVH21    <---------ANAC58   cggaatcggaagaatctccatcgggaaaatttaacgggccggctggcgagatacttcggacgggtgagctgacgagctgcttgagacgggcgagctgatg  4787700                                                                           ----------->ARR10                                                                    --------->ZAT2                                                                    --------->At4g35610                                                                    <---------At4g35610                                                                    <---------ZAT2                                                                    --------->ATERF1(1)                                                                    <------NtERF2                                                                    ----------->RAV1(2)                                                                   ------>NtERF2                                                                   <---------ATERF1(1)                                                                   <---------RAP2.6(3)                                                      <---------ANAC46   <---------ANAC58                         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------DEAR3(2)                  ----------->TGA1                    <---------ANAC58   <---------ANAC58                  ----------->HVH21                   <---------ANAC58   <---------ANAC46                --------->At4g35610                xxxxxxxxxxxxxxxx>smallRNA(i)               <------                --------->ZAT2                    <---------At4g35610   <------NtERF2         <------                ----------->RAV1(2)               --------->At4g35610 <---------DEAR3(1)      -------                <---------At4g35610         ----------->HVH21     <---------ATERF1(2)         -------             --------->DEAR3(2)            ------>ZmHOX2a(2)      <---------RAP2.6(2)       ---------            <---------ARR14(2)            <---------At4g35610     --------->ATERF1(2)       xxxxxxxxx            --------->MYB52(1)           <---------ARR11(3)       <---------DEAR3(1)        xxxxxxxxx         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   xxxxxxxxxxxxxxxx>smallRNA(i)             <----------      <xxxxxxxxxxxxxxxxsmallRNA(i) <---------TGA1a<---------ZAT2 --------->RAP2.6(3)    xxxxxxxxxxxxx     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->At4g35610    --------->ATERF1(1)   ============== xxxxxxxxxxxxxxxx>smallRNA(i)<-----------HVH21  xxxxxxxxxxxxxxxx>smallRNA(i) <---------ARR11(3) ----- ->At4g35610--------->ARR14(2) <-----------RAV1(2)--------->ZAT2<---------ATERF1(1)    <---------TGA1a   agctacttgagacggaccggctgacgagatgcttcagacgggtgatctgacgagctgcttgagacgggccggctggcgagatacttcagacgggtgagct  4787800                                                                                        <---------ZAT18  <---------At4g35610                                                               --------->ALFIN1  --------->ZAT2                                                                   --------->REM1(2)  --------->At4g35610                                        --------->LBD16       <---------ZAT14  <---------ZAT2                          *TSS              --------->ANAC55(2)   --------->ALFIN1 ---ZAT2                                  ----------->HVH21 <---------ANAC58     <-------MYC2 ---At4g35610                       <---------ALFIN1        <---------ANAC55(2)  <-------MYC3 -->At4g35610                     <---------ATERF1(1)       <---------ANAC55(1)  ------->MYC2 -->ZAT2                        --------->ATERF1(1)         <---------ANAC46     ------->MYC3 >ZAT18  <----------DOF2       <------NtERF2                <---------ANAC58    <---------ANAC58 xxxxxxx>smallRNA(i)  --------->ZAT18    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------ANAC46 xxxxxxxxx>smallRNA(si3)       ------>NtERF2   --------->ANAC58   <xxxxxxxxxxxxxxxxsmallRNA(se3) -HVH21<----------DOF2<---------ZAT18   <----------DOF2    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxx>smallRNA(le3)       <---------ATERF1(1)  --------->ANAC58          <---------ANAC46 =================bZIP_DOF------>ZmHOX2a(1)    --------->ANAC58 <-----------TBP <---------ANAC58 ------>HVH21---------->ID1   --------->DEAR3(1)    --------->ANAC58         <---------LBD16<-------TEIL   gacgagctgctctttgtctctaagtgtcctcgcggcctccccctttgacaagacatgctattccgtatttatagccttctgcgcgtgtagggcattcatc  4787900                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               -------->P                                                                          <-             <---------MYB52(2)                                                          --------->MYB59             <---------MYB111(1)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            --------->HSFC1(2)                                     xxxxxxxxxxxxxxxx>smallRNA(i) <----           <-----------ARR10                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->ANAC46            <---------TOE2(2)           <---------ANAC58         xxxxxxxxxxxx        xxxxxxxxxxxxxxxx>smallRNA(i)<---------TOE1(2)           <---------ANAC58       <xxxxxxxxxxxxx       <---------TOE2(3)--------->TOE2(3)                 <----------DOF2        <----------ID1 -----   gagggatttgacgaaactacccttcgccttaatactccttggtttggaacttattttgggcttttgacttgggtttgggcattgggccaagtaggcccaa  4788000                                                     <------ZmHOX2a(1)                                                  <-----------RAV1(2)                                                 <------ZmHOX2a(2)                                                <---------ARR14(2)                                                --------->ARR14(2)                                           <---------ANAC58                                           <---------O2<---------GLK1(1)                          ------>ZmHOX2a(1)<---------bZIP60(2)    --------->ANAC58                        ----------->RAV1(2)--------->O2--------->GLK1(1)                      <---------ARR14(2)   <---------TGA1a        --------->ANAC46           --------->At4g35610             <---------ANAC46       --------->ANAC58       --------->MYB52(1) ==============================HOX2a_HOX2a      ----------->HVH21<---------ATHB12    <---------ANAC58    --------->ZAT18 --------ETT(1)       --------->ARR14(2)  ----------->STF1     <---------ZAT18 -----ARR14(2)      <---------ALFIN1     <---------TGA2(2)  --------->At4g35610                 <---- xxxx>smallRNA(i)------>NtERF2  ------->TEIL --------->ALFIN1  <-------TEIL                    <----- xxxxxxxxxxsmallRNA(fl3)--------->YAB1  ----------->TGA1    <---------At4g35610          ---------->DOF2 ---->ARR14(2) --------->ATERF1(1)      ----------->HVH21 <-----------RAV1(2)       ----------->GT1   tccgacccctaacagttgccccccaatcctgatgcatcgttgatgacgtggatcaggatttcaggtgcacgaaactcaatcgaaggaagtgaaaagtcgc  4788100                                                               --------->O2                                                               <---------O2                                                               =====================bZIP_DOF                                                               --------->TGA1a                                                               <---------TGA1a                                                               <---------bZIP60(2)                                                               =====================bZIP_DOF                                                               <---------ANAC46                                                               <---------ANAC58                                                           <-----------HVH21                                                          --------->O2                                                          <---------O2                                                         <---------HSFC1(2)                                                     ------>ZmHOX2a(2)                                                   <---------ARR14(2)                   <------MYB83 <---------YAB1    <------ZmHOX2a(1)                   <------MYB46(1)<---------GLK1(2)--------->ARR14(2)                       <--------         --------->ANAC58  ==============================================bZIP_DOF          <---------LBD16         --------->ANAC58  <----------DOF2     --------->HSFB2a(2)       ---------->DOF2   <---------At5g28300         --------->ANAC46---------->ID1        <---------HSFB2a(2)      --------->YAB1     --------->RAP2.6(3) -----ANAC46   --------->ATHB12 --------->ICU4<---------TOE1(1)<---------ANAC58        <----------DOF2 ----LBD16    --------->ICU4  --------->YAB1 <-------TEIL--------->HSFC1(2)          <---------At4g35610   gcatggggaagacgcaatgtttggtttgtctttcatgattctcaaggttcgaggatcgaaacgtcgcgtggctatcaaagtataggctgctattacggca  4788200                                                               --------->ANAC55(2)                                                               <---------ANAC55(1)                                                               <---------ANAC46                                                               <---------ANAC55(2)                                                               <---------ANAC58                                                               <---------ANAC58                                                               <---------AtLEC2                                                            <---------MYB52(1)                                                           <-------GAMYB                                                          <---------MYB46(3)                                --------->ANAC58          --------->MYB55(2)                ------>ZmHOX2a(1)                                --------->ANAC58   <------NtERF2  <---------WRKY18(1)       ---------                           <----------ID1 ---------->DOF2 <-----------RAV1(1)<---------ARR14(2)                           --------->ANAC58        --------->ATERF1(1)      --------->GLK1(1)     ---                           --------->ANAC58    <-----------HVH21 ----------->HVH21          ---------                    --------->ANAC58 <------MYB83<---------DEAR3(1)   <-----------HVH21     <-------- --------->At4g35610--------->ANAC58 ----------->GT1    <---------At4g35610 <---------GLK1(1)   <---- -ANAC55(2)      --------->WRKY18(1) <------MYB46(1)  <---------DEAR3(1)   <----------DOF2-----------   atgtgctgtctcggtgatagtcaagcgagacgacaaggaaggttaaaagggtcgcctcggctgttgcgtgaccgtcgcatttctgaagagcctcctggat  4788300  Previous    Next  AGI:  At5g14800.1    Description:  P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE); pyrroline-5-carboxylate reductase. Identical to Pyrroline-5-carboxylate reductase (PROC1) [Arabidopsis Thaliana] (GB:P54904); similar to Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase) (GB:P17817); contains InterPro domain NADP oxidoreductase, coenzyme F420-dependent; (InterPro:IPR004455); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Delta 1-pyrroline-5-carboxylate reductase; (InterPro:IPR000304) Range:  from: 4785963    to: 4787842    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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