Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->HSFB2a(2)                                                              --------->HSFC1(1) ----ZmHOX2a(2)                                               <---------HSFB2a(2) -->ANAC55(2)                                                 <---------HSFC1(1)  --------->GLK1(1) ---ANAC46  ---------->DOF2                              ------>ZmHOX2a(2)        <---------GLK1(1) ---ANAC55(2)          --------->ANAC46                  ==============================HOX2a_HOX2a --LBD16 <---------HSFB2a(2)                       <---------ANAC58             <------ZmHOX2a(1) >MYB52(1)--------->LBD16         ---------->DOF2  --------->TOE2(3)   --------->At4g35610 ---GT1  --------->HSFB2a(2) ----------->GT1       <---------ANAC58 <---------ATHB12      <----------   atcatatatatccagaaaggaatacaaacaagagaaaaaagcctcaccagtttccttgatcgctctagaaatcatctcaacaggaaatcccatgtcaaac  4718300                                                                   --------->ARR11(3)                                                           --------->At4g35610                                          --------->At4g35610  ---------->DOF2                            --------->At4g35610            <---------At4g35610  ----------->GT1           <---------At4g35610        <------ZmHOX2a(1) -HVH21                     ----------->RAV1(2)     <---------------------WRI1   aatgtagcaaaaacctcgtctgagaagcccatctgaactaaatcagttgtctcagtaggagagctcaaagaactagttgtctgaaacaaaacaaaaattc  4718400              <---------At4g35610                                                               <----             <---------YAB1                                                           <---------ALFIN1         <---------GLK1(2)                                                  <-----------GT1     <----        --------->YAB1                                                   --------->ARR11(3)     <----        <--------ATHB1                                                   <---------GLK1(2)<---------ZAT14       <---------ATHB12                                                  <---------ARR11(3)     <----       <---------YAB1                                               --------->ZAT2   --------->ZAT14       --------->ICU4               <-------GAMYB                   --------->At4g35610   --------->ZAT14  --------->ANAC58                 <-----------RAV1(1)  <---------LBD16----------->ARR10--------->ANAC46  --------->ANAC46                 <---------MYB46(3)-------->P--------->REM1(1)     <---------ZAT14  --------->ANAC58             <---------YAB1  <------ZmHOX2a(2)    <---------ZAT2   <---------REM1(2)   acataagcaatgattctgcttaggcataaacttatgactgttggattggatcacttaccacggctacaccagctagattttcgaccctacactgcattgc  4718500                                                             <---------MYB52(1)         ----------->HVH21                                  --------->TOE2(3)         --------->WRKY38(1)                            <---------ICU4       --------->At4g35610                           --------->YAB1       <---------At4g35610                           <---------ICU4 -----AtLEC2                                        <---------YAB1 -----ANAC46               ---------->DOF2        --------->YAB1 -----ANAC58    --------->REM1(2)   --------->WOX13(1) <---------YAB1                         ------- -----ANAC58   --------->ALFIN1   <---------YAB1  <---------ICU4                         --------->LBD16   atgtattggagatgaccgtggagaagattgaaagttatcaatctccaaaaaatcatcatcatcgttattccaaatcaccatgagtaatacccagagaatt  4718600                                              <---------ARR14(2)                                              --------->ARR14(2)                                              --------->ARR11(1)                                              <---------GLK1(2)                                              --------->ARR11(3)                                             --------->YAB1                                            ----------->ARR10                                          ---------->DOF2                                        <------NtERF2                                       ------>NtERF2                                       --------->LBD16                                      --------->RAP2.3(3)                                      --------->RAP2.6(2)                                      --------->RRTF1(2)                                      --------->DREB2C(2)                                      --------->ATERF1(2)                                      --------->RAP2.3(2)                                     --------->ERF1                                     --------->RAP2.3(1)                                     <---------LBD16                                     --------->ORA47(2)                                     --------->RRTF1(1)                                     <------NtERF2                                    ------>NtERF2                                    <---------ATERF1(1)                                    <---------RAP2.3(1)                                    --------->ABI4(1)                                   --------->RAP2.3(2)                                   <---------DEAR3(1)                                   --------->ATERF1(2)                                   --------->DEAR3(1)                                   --------->RRTF1(3)                                   --------->RAP2.3(3)                                   <---------ATERF1(2)                                   --------->RRTF1(2)                                  --------->RAP2.6(1)                                  --------->RRTF1(1)                                  --------->ERF1                                  --------->DEAR4(2)        <---------MYB46(3)                                  --------->ORA47(2)        <------MYB83                                  --------->ATERF1(1)       <------MYB46(1)                                  --------->RAP2.3(1)      <---------AtMYB61                                  <------NtERF2--------->ARR14(1)                    --------->At4g35610                                 ------>NtERF2<---------ARR11(3)                     <---------At4g35610                                 <---------ATERF1(1)   <------NtERF2              <---------MYB52(1)                                 --------->LBD16      ------>NtERF2              <-----------TGA1                      ---------->DOF2--------->ATERF1(1)   <---------MYB46(3)    <-----------HVH21                   --------->At4g35610<---------ATERF1(2) <---------MYB52(1)    --------->ETT(2)                   <---------At4g35610--------->DEAR3(1) <-------GAMYB    <---------CCA1(2)        <-       --------->At4g35610      --------->ANAC46     <---------ETT(2) <---------ANAC58          <----       <---------At4g35610    <---------ATERF1(1)  <-----------HVH21--------->ARR11(3) --------->ZAT14 -->GLK1(2)     ---------->DOF2--------->MYB46(3) <-----------RAV1(1) <---------ANAC58 <---------ZAT14   tttagtttgagctacagattaagcagaagcgctcccgccgccggcaaagatactgtcgccgttggtgagagagcttgtatcgtcgtcagtttactggagg  4718700                                                                                                -----                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                            ---------       *TSS    --------->DAG2      ----------->GT1                                          <--------     --------->At5g28300           <----------ID1                                           <--------     --------->LBD16   <---------YAB1                                                       ---------    ----------->GT1  <---------At4g35610 <----------ID1    ------------>CBF      <-----------GT1<---- -----ZmHOX2a(1)     <-------GAMYB------------------------>ANAC81   ---------->ID1      ------------>CBF --ZmHOX2a(1) ---------->DOF2    ---------->DOF2        <------------CBF      --------------->AtSPL8   aggaaaccgtgaaacaaaaagtcggatgattctaaaaaagaaaaaaacaaattcagagtattgcaatttagtccctattctttgtactacttcaataatt  4718800                                                      ----------->HVH21                                                    <---------bZIP60(2)                                                    <---------bZIP60(1)                                                    --------->bZIP60(1)                                                    <---------ANAC58                                                    <---------TGA1a                                                    --------->ANAC55(2)                                                    <---------ANAC55(1)                                                    <---------ANAC55(2)                                                    <---------ANAC46                                                    <---------O2                                                    --------->O2                                                    <---------ANAC58                                                    --------->TGA1a                                                    ============================bZIP_DOF                                                 <---------MYB52(1)                                                <-----------HVH21                                               --------->ANAC58                                               <---------TGA1a  ------------>CBF                             --------->TGA1a ---->AHL20(2)                                 --------->ANAC46 -HAHB4                                        <---------ANAC55(2) --ICU4                                        --------->bZIP60(2) ->ATHB51                                      =================================bZIP_DOF ->YAB1                      --------->YAB1    --------->O2 -ATHB1                 <---------ATHB12       <---------O2 >ICU4           <-----------GT1               --------->ANAC55(1) -ATHB51        --------->AHL20(2)             --------->ANAC55(2)   <----------DOF2           <----- -ATHB12    <---------AHL20(2)                 --------->ANAC58    <---------MYB46(3)         ------- >AHL20(2)  --------->AHL20(2)            ----------->HVH21    <---------AtMYB61             <------- -----AHL20(2)  <---------AHL20(2)    --------->AHL20(2)       <-----------RAV1(1)          ---------   aaactacaatgtttttaattaactaaatcaataaacatgaataaatgacacgttacgtgacacttgtggtgcttagaggcaatttgcgaaactaattttt  4718900                                     <---------At5g28300                                    <-----------GT1                                 --------->WOX13(1)                             <-----------GT1     <---------ATHB12    --------->ARR14(2)             ----------->GT1  <---------WRKY38(1)    <-----------ARR10            <------ZmHOX2a(1)           <---------GLK1(2) ----YAB1                --------->ARR11(3)         <---------TOE2(3)           --------->ANAC46 -->AHL20(2)             <---------ARR14(2)   <---------ANAC58                  --------->ANAC58 --ICU4 <---------YAB1   <---------ARR11(3)   <---------ANAC46          --------->TOE2(3)      ------ >ICU4--------->YAB1    <------ZmHOX2a(1)     <---------ANAC58   ----------->GT1--------->ANAC58   atagtcaatgataattcatgtttagaggatattaccaattaccgtatttcgtttgaggaagtgaaattggttaaacttaaacaagaaactctcgtaaatg  4719000                                                                                  ----------->HVH21                                                                                 ------->MYC3                                                                                 ------->MYC2                                                                                 <-------MYC2                                                                                 <-------MYC3                                                                                <---------O2                                                                                --------->TGA1a                                                                                --------->bZIP60(2)                                                                                <---------TGA1a                                                                                --------->O2                                                                                --------->ANAC58                                                                                --------->ANAC55(1)                                                                                <---------ANAC55(2)                                                                                --------->ANAC46                                                                                --------->ANAC55(2)                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                      --------->AtLEC2                                                                    <---------ANAC58 <---------ANAC58                                                                    <---------ANAC58 <---------ANAC58        --------->ANAC46                                    <----------DOF2----------->HVH21  ------- <----------DOF2                                            ==============================bZIP_DOF <---------DAG2              --------->YAB1   <----------DOF2      <-------TEIL --------->ANAC58 ----->HVH21        <----------DOF2           ============================================bZIP_DOF   acacttttacacagaacataggcttttttaaaaataagtttggctaagctttgaagcatgagctttggatgcatgcaatgacacgtgacgagcgagaagt  4719100                                                                       -------->ATHB1                                                                       --------->ATHB12                                                                       --------->YAB1                                  --------->DEAR3(2)                   <---------ICU4                                 --------->MYB52(1)                   <---------ATHB12           ----                               ----------->HVH21                      --------->ICU4         <-------     <---------AHL20(2)    <---------ZAT14                      --------->ZAT6        ----------->GT1     <---------YAB1    --------->MYB52(1)                 <-------TEIL<---------YAB1 --------->DAG2  <---------AHL20(2)--------->YAB1--------->SPL7   <-----------HVH21--------->YAB1   <---------------AtSPL8 ---->GT1         ----------->RAV1(1)       ---------->DOF2    --------->ZAT14      ---------->DOF2<-   ttattttataatttagtatccaacataactgtagcgaccggcgagtcaaagaccgtcacatacattacactaatcattgtatgtaataaagtacaaaggt  4719200  Previous    Next  AGI:  At5g14620.1    Description:  DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2). similar to DRM1 (DOMAINS REARRANGED METHYLASE 1) [Arabidopsis thaliana] (TAIR:AT5G15380.1); similar to DNA methyltransferase [Nicotiana tabacum] (GB:BAC67060.1); contains InterPro domain Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); contains InterPro domain C-5 cytosine-specific DNA methylase; (InterPro:IPR001525) Range:  from: 4715256    to: 4718707    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g14640.1    Description:  protein kinase family protein. Identical to Shaggy-related protein kinase epsilon (ASK5) [Arabidopsis Thaliana] (GB:Q8VZD5;GB:Q9LYJ6); similar to ATSK11 (Arabidopsis thaliana SHAGGY-related kinase 11), protein kinase [Arabidopsis thaliana] (TAIR:AT5G26751.1); similar to ATSK12 (Arabidopsis thaliana SHAGGY-like kinase 12), protein kinase [Arabidopsis thaliana] (TAIR:AT3G05840.2); similar to ATSK12 (Arabidopsis thaliana SHAGGY-like kinase 12), protein kinase [Arabidopsis thaliana] (TAIR:AT3G05840.1); similar to serine/threonine protein kinase [Adonis aestivalis var. palaestina] (GB:ABY60447.1); similar to hypothetical protein [Vitis vinifera] Range:  from: 4719080    to: 4722282    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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