Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->LBD16                                                                      <---------LBD16 ----------->HVH21                                                   <---------LBD16 ----ZmHOX2a(1)                                                 <---------GLK1(1) ----LBD16  --------->MYB52(1)                                 <---------GLK1(2) ------RAV1(2) ----------->GT1                          --------->MYB46(3)   ggagggacagagccaaacagaaaatttgaactcaaatccaagtactcaagagaattcaaccgatggattttccctgggaactcaccatagatacctagag  4581000                                                            <---------YAB1                                                          --------->YAB1                                                          <---------ICU4                                                         --------->ICU4                                                         <---------ATHB12                                                         <---------ATHB51                                        ----------->GT1--------->WOX13(1)                          --------->ANAC58          --------->GLK1(2)                          --------->ANAC58     ---------->DOF2 ------->TEIL   ----------->GT1   acactaagctaagaaccctcaagcttgtaagccttgtcaatgtggtaacaaaagaatcaattatgaatgcttcagacagagtgtgatttggaagtgaaga  4581100                                                                 --------->TOE2(3)                                                     ----------->HVH21             <---------O2                                                    --------->LBD16                <---------TGA1a                                                    <-----------HVH21              --------->O2                                                   <---------ANAC46       --------->ALFIN1                                                   <---------ANAC55(2)  --------->ANAC55(2)                                                   --------->ANAC55(2)  <---------At4g35610    <-----                           <---------ANAC58 =================================================bZIP_DOF                ----------->GT1---------->ID1  <---------At4g35610    <-----------RAV1(2)      <-----             ------>MYB83  <---------ANAC58 ---------->DOF2      --------->TOE1(3) --------->TGA1a             ------>MYB46(1)   ---------->ARF1 --------->At4g35610 ----------->HVH21       --------->At4g35610      --------->YAB1   ---------->DOF2    <----------DOF2       ----------------->AG    <---------At4g35610   cccatcaaacataccaaatggtttaaaaagcttgtcccccatgactttaagctccgtgatggaattaccttgacaggtgatgctcatgtgagcagttgca  4581200                                                                      <---------ZAT2                                                                      --------->At4g35610                                                                   --------->LBD16                                                                   ------>ZmHOX2a(1)                                                                 ----------->RAV1(2)                                                              <---------ANAC58                                                              <---------ANAC58                                                             --------->HSFB2a(1)                                                             <---------HSFC1(2)                                                             --------->HSFC1(2)                                                        --------->HSFB2a(2)                                                    --------->GLK1(1) <---------At4g35610                                       --------->LBD16  <---------HSFB2a(2)                                      <---------HSFB2a(2)    <---------HSFB2a(1)                                      --------->HSFB2a(2) <---------At4g35610     ----------->RAV1(2) ----AtLEC2                  --------->LBD16<----------DOF2<---------GLK1(2)    <------ZmHOX2a(1) ----ANAC46        --------->YAB1  --------->GLK1(2)<---------GLK1(1) --------->ZAT2   gggatttgacataagtctccatagtaatttccccaagattccagagctttagggaattccagatgcttcctgagctgatacaggacctgagtctgagagt  4581300               <----------DOF2               <---------ANAC46                              --------->AHL20(2)          <---------ANAC58                                   <---------AHL20(2)          <---------ANAC58                                 <----------DOF2        <---------YAB1                            ----------->GT1   --------->At4g35610                           <---------TOE2(3)                       ---------->DOF2   <---------At4g35610                         ---------->DOF2       ----------------->AGL1   <-------GAMYB                        ---------->DOF2   --------->TOE1(3)     ---------->DOF2  <---------MYB46(3)                ---------->DOF2       --------->TOE2(3)   <------ZmHOX2a(1)  <---   tcggcagttgatgagtgctttgtaagaacataacccatgaaagaaagagcaaaggtaaaacctttaattgttccattgcaggaaaagaaaacaaagatga  4581400                                                                                                <----                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                <---------At4g35610                                                                                --------->At4g35610                                 <---------ARR14(2)                           <---------WRKY45  -----                       --------->At4g35610 <------ZmHOX2a(1)                  <---------ZAT18  ------                    ---------->DOF2  <---------YAB1                           <---------WRKY12 ------ ---------CBF  <<<<<<<ZML2       <---------GLK1(2)---------->DOF2             <---------WRKY38(1)   attgaaacagaaccctagaactagaagcagacttggattctgagaggaaaatgaaagagacccatctaggtgttttctagtcaactcaagtcaaaccaag  4581500                                                                                        -------------                                                                                        --------->ANAC58                                                                                        --------->ANAC58     ===================HOX2a_HOX2a                                                    --------->DAG2     ------>ZmHOX2a(2) <---------At4g35610   ----------->GT1                  ----------->GT1 -----ZAT2       ------>ZmHOX2a(1)        <------------CBF      --------->LBD16<------ZmHOX2a(1) ---->ZAT2 --------->ANAC58      --------->ANAC58      --------->YAB1       <-----------RAV1(2)    -- >MYB46(1) --------->ANAC58      --------->ANAC46   --------->YAB1        <-----------HVH21 --------- >MYB83<---------HSFB2a(2)       --------->ANAC58  <---------YAB1   ---------->DOF2   ---------->DOF2   ctcgtgatcccagacgctcctatggagcaaactccaaggaactgaattggtttataatcaaaatccctgagaaagaggtcaggaaacaaaaagcaaaaga  4581600                                                                        --------->ARR14(2)                                                  <---------YAB1        <---------ARR14(2) ----------->ANAC81        --------->GLK1(1)--------->DDF1           --------->ETT(1) ------->YAB1  <------ZmHOX2a(1)     <------ZmHOX2a(1)              ---------->ID1 ->DOF2       <----------ID1       <---------ANAC46             <---------MYB52(1)        ---------->DOF2   agaataagagagagtgaggacaaatgcagaaatcgtggaggagaatgtcggtattcttgtgagtctgtttgtcggattcaacacatagacgagaaagaaa  4581700                                                                                            <--------                                                                --------->At4g35610        <---------                                                                <------NtERF2        --------->GLK1(2)                                                                <---------ZAT2       --------->ARR11(3)                                                                --------->ZAT2       <---------ARR11(3)                                       ---------->DOF2          <---------At4g35610  <-----------ARR10                                --------->YAB1        --------->TOE2(3)              <---------ARR14(2)                                <---------ICU4        <----------DOF2                --------->ARR14(2)                   <---------YAB1  --------->YAB1  ----------->RAV1(1)              <---------GLK1(2)    --------->ANAC58           --------->ICU4    <---------At4g35610          <---------At4g35610  <<    --------->ANAC58         <----------DOF2     --------->At4g35610       <---------AHL20(2)   <<<<<   ctagggaagctagagaagaagatgataagagcattaatgacaaaagagttgagcagcattaatggcagcttcagtaatttatctgagaatcttttttctt  4581800                                                            --------->DAG2                                                        --------->YAB1                                                       <<<<<<<<<ARR2                  <---------YAB1                                                     --------->WOX13(1)     --------->ANAC46                                             --------->ANAC58            <---------ZAT18  <<<<<<<<<TBF1                              --------->ANAC58----------->GT1--------->ANAC58 ---GT1        ---------->DOF2           <---------PCF2<<<<<<<<<ARR1     <---------ZAT14 ---------------ANAC81 ----------->GT1   <-----------HVH21 ---------->DOF2  --------->ANAC58 <<<<<<<TBF1 <---------YAB1           --------->ALFIN1 <---------ATHB12  --------->ZAT14            < <<<<TBF1<----------DOF2--------->At5g28300  <---------ANAC55(2)         --------->ZAT18      <------   cttcttcttctctttatgaaagaaacagtaaatttagaatgtgggtcacgaaaaacaatcataaagcaaaaaatgtgcactcaatttgatgaaaggttgt  4581900  Previous    Next  AGI:  At5g14210.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G03770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69961.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14590.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 4578380    to: 4581376    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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