Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------NtERF2                                                   ----------->GT1 ----------CDC5         <---------MYB46(3)               ------>MYB46(1) --->DAG2        <---------ANAC46    --------->ANAC46    ------>MYB83                    --------->ZAT6 -->DOF2      <----------DOF2    <-----------GT1    <-----------GT1                    <-----------GT1   gcgcagagccttgaggcttttgtggattgttgttgttaccagacattgctatataaacctatcagcctgaaaaattcagaaacaaaaaataacactcttg  4570500                           --------->YAB1                         ------->TEIL                      <---------ANAC55(2)                      --------->ANAC55(2)                    --------->MYB52(1)                    ------>MYB83<---------At4g35610                    ------>MYB46(1)                   --------->MYB55(1)                  <---------MYB59                  <---------MYB46(2)                  --------->AtMYB61                  <---------MYB52(2)                  <---------MYB55(2)                                 --------->At4g35610                  <---------MYB111(1)                                <---------At4g35610           --                 --------->ANAC58                             --------->ARR14(2)        <---------MYB52(1)                 --------->ANAC55(1)                  <---------ARR14(2)             ------>ZmHOX2a(2)                 --------->ANAC46         --------->GLK1(1)   <---------ARR14(2)   ------------>MYB.PH3(1)                 --------->ANAC58     --------->YAB1  --------->ARR14(2)  ------->TEIL<---------MYB46(3)   aaaaataaacttcaattacacctaacgtatcgtaagcttatcagaaatctaagacatatatgcagaaattcagatgaatgcaatagatcggttacctaga  4570600                                    --------->ZAT14                                    <---------ZAT14                --------->TOE1(3)   --------->At4g35610        --------->TOE1(3)           <---------At4g35610        --------->TOE2(3)   <---------TOE2(3)     --------->ARR14(2)     <---------YAB1      --------->AHL20(2) ------->GLK1(1)--------->TOE2(3)--------->At4g35610   <------ZmHOX2a(1)      --------->MYB52(1)   gaaatcgaaacctcaaaaccctaattttctaagattgctgcagagttcaactaaataggagtaatacccaggcttaaaaacaacgtcgaagagaaaatga  4570700                                                                          <-----------GT1                                                                   <---------HSFB2a(2)                                                                   --------->HSFB2a(2)                                                                  =========================HOX2a_HOX2a                                                                  ------>ZmHOX2a(2)                                                                 ==========================HOX2a_HOX2a                                                                 --------->CCA1(2)                                                                 <------ZmHOX2a(2)                                                                <---------ARR11(3)                                                                <---------ARR14(2)                                                                <---------AGP1              <-------TEIL                                                                --------->AGP1             --------->CCA1(2)                                                                --------->ARR14(3)      <------------                                                                <---------ARR14(3)  ------>ZmHOX2a(1)                             --------->GLK1(2)                  --------->ARR14(2) --------->TOE2(3)                    --------->ATHB12                            --------->ARR11(3) --------->TOE2(2)               <---------ARR11(3)                             ----------->ARR10    --------->TOE1(2)               --------->ARR11(3)       --------->AHL20(1)  ---------->DOF2     <---------ARR11(3)---   ctgaaaatgcgaatgaagaactcgattggagaatttttgaaatatactactaagtggccatagaaagatctggaatttacaaaatcctaagagatacaaa  4570800                                                                   <------MYB83                                                                  --------------->AtSPL8                                                               --------->ZAT2                                                               --------->At4g35610                                                         --------->ARR14(1)                                                         --------->CCA1(2)                                                        <---------ARR14(2)                                                        <---------GLK1(2)                                                        --------->ARR14(2)                                                        --------->ARR11(1)                                          ------>ZmHOX2a(1)    <---------At4g35610                                 --------->HSFB2a(2)   <---------HSFB2a(1)                               <------ZmHOX2a(2)       --------->HSFB2a(1)                               ==================HOX2a_HOX2a   <---------ZAT2                     ---                              --------->ARR11(3)       --------->HSFC1(2)                        ----                              <---------ARR11(3) --------->MYB52(1)<------MYB46(1)               <---                          ---------->DOF2--------->TOE1(3)    <---------TOE1(2)       <-----------GT1                    --------->ANAC46     --------->TOE2(3)<-------TEIL           <---------YAB1  <--- ---AtSPL8       <---------ARR14(2)  --------->GLK1(1) <---------HSFC1(2)   <---------DAG2      <---- ------>MYB52(1) --------->ARR14(2)  <---------GLK1(1)----------->ARR10     <----------DOF2  <-------   aaacagaaaacccagagcctatacaccataaagatcgagaattccttaaaaaaacgaagattcgcagcttggtacctgcttttttgattcaccttctttc  4570900          --------->ALFIN1      <---------LBD16     <---------At5g28300    <-----------GT1 --------->ARR14(2)        <---------At4g35610 <---------ARR14(2) <---------ANAC58                                    <---------At4g35610 ------>LBD16       <---------ANAC58                                 --------->LBD16 ----->HSFB2a(2) <---------MYB52(1)                                <---------LBD16       <---------LBD16 ------HSFB2a(2)<-------GAMYB                                     --------->MYB52(1)   <---------SPL7 ------LBD16   <---------ANAC58                                  <---------ALFIN1   <---------At5g28300 -----LBD16    <---------ANAC58          XXXXXXXXXXXXXXXXXXXXX>MIR2936  --------->At4g35610--------->LBD16 ---DOF2 <---------MYB52(1)--------->At4g35610   *TSS           --------->MYB46(3) <-----------GT1   cgggattcaccggtgttccgttgcttctcagttgtcgagactcgagagagaaaacaaaaacaaatgcccaccggagctatctattttactgtccgggtta  4571000                ---------->DOF2        --------->LBD16                                                           <---------ARR14(2)       <---------ANAC55(2)                                   <-------MYC3         --------->ARR14(2)       --------->ANAC55(2)   ----------->GT1                 ------->MYC3    ------->GAMYB  ----------->HVH21      <------------CBF          <----------DOF2          <----------ID1  <---------ETT(1)    <---------ALFIN1             --------->TOE2(3)        --------->ANAC46 --------->DEAR3(2)   ----------->RAV1(1)       <---------ALFIN1            --------->MYB46(3)     <-   agacccgacccgtatttttaaagcccacattgagttatatcaaactggcccaactttaatccatgtgtttttttttcaacgacaaatccacatacaattt  4571100                                                                                            <--------                  --------->ANAC58                   <---------ANAC58               --------->ARR14(2)                  --------->ANAC58                   <---------ANAC58               ------->TEIL           ---------->DOF2                          ---------->ID1                  <---------ARR14(2)        --------->AHL20(2)                <---------YAB1                            --------->GLK1(2)        <---------AHL20(2) --------->ANAC46        <-----------GT1            --------->ARR14(2)   <- ---------ID1   ---------->DOF2         <-----------GT1     <----------DOF2   <---------ARR14(2)  <--   gacgacaaaattaaaaagaaaagcattccacataattttgttttactatagtttttcgtttcctttttttttttttgtcaaatacgaatctgtagtttta  4571200                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                              --------->GLK1(2)                                                                              <---------ARR11(3)                            --------->At5g28300                               --------->ARR11(3)   <----------DOF2   --------->ZAT6             >>>>>>>>>>>>>>>>>LFY         --------->RVE1(1) -ZAT6--------->TOE2(3)    ----------->GT1--------->ATHB12                 --------->AHL20(2) --------ZAT18   <---------MYB59          <---------MYB46(3)      <---------TOE2(3)   <---------AHL20(2) -------ZAT6     --------->TOE2(3)       <---------YAB1          ---------->DOF2--------->TOE2(3)   gtgttctttcttaaatatacctaaaactagggtaaattagataatggttgccccattgtttatagattaaagaaaaaaaaaatctaaattaaatattggg  4571300                                                       <---------YAB1                                                    <---------AHL20(2)                                                    --------->AHL20(2)                   --------->ZAT18                  <---------AHL20(1)        --------->YAB1                              --------->AHL20(1)    <---------AHL20(2)                             --------->AHL20(2)    <---------YAB1 --------->ZAT14             <---------AHL20(2)    --------->AHL20(2)                  --------->AHL20(2) <-----------GT1   <---------AHL20(2)          <----------DOF2<---------AHL20(2)   --------->AHL20(2)          <---------DAG2 --------->AHL20(2) <---------YAB1    <---------ZAT14  --------->YAB1 <---------AHL20(2)        ----------->GT1---------   attattttaattagaagctagtagactggtatactttttcataaaaattttaattttatttttgcccattttgtttagagggaaacaattgaagaatatg  4571400  Previous    Next  AGI:  At5g14170.1    Description:  CHC1. Identical to Uncharacterized protein At5g14170 [Arabidopsis Thaliana] (GB:Q9FMT4); similar to SWIB complex BAF60b domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G01890.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60756.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49002.1); contains InterPro domain SWIB/MDM2; (InterPro:IPR003121) Range:  from: 4568511    to: 4570949    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g14180.1    Description:  MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1); catalytic. Identical to Triacylglycerol lipase 2 precursor (LIP2) [Arabidopsis Thaliana] (GB:Q67ZU1;GB:Q681B0;GB:Q6VY31;GB:Q94AE7;GB:Q9FMT2;GB:Q9FMT3); similar to ATLIP1 (ARABIDOPSIS THALIANA LIPASE 1), galactolipase/ hydrolase/ phospholipase/ triacylglycerol lipase [Arabidopsis thaliana] (TAIR:AT2G15230.1); similar to lipase [Ricinus communis] (GB:AAY17358.1); contains InterPro domain Lipase, active site; (InterPro:IPR008262); contains InterPro domain AB-hydrolase associated lipase region; (InterPro:IPR006693) Range:  from: 4571339    to: 4574464    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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