Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <------NtERF2                                    --------->LBD16                                   <---------ANAC46                                  <------NtERF2                                  <---------LBD16                                  --------->ATERF1(1)                                               -                                 ------>NtERF2                                                      -                                 <---------ATERF1(1)                                                <                                <---------PCF2                                                      <                                <---------PCF5                                                      <                                --------->TCP15(1)                                                  <                                --------->TCP20                                                 -----                                <---------DEAR3(1)                                             ======                               <------NtERF2                                                <------ZmHOX2a(1)               <---------SPL7  --------->ATERF1(1)                                          =========       <---------ATHB12       --------->LBD16      <---------HSFB2a(2)                      =========     --------->GLK1(1)        <---------ATERF1(1)  --------->HSFB2a(2)                   <---------HSFB2a(2) --------->LBD16   <------ZmHOX2a(1)<------NtERF2  --------->HSFC1(1)              <-------PIF5====== --------->HSFB2a(2)         --------->ALFIN1  --------->GLK1(1)                   ------->PIF5<----- <---------HSFB2a(2)    <------ZmHOX2a(1)      <---------GLK1(1)                  ----------->RAV1(2) -------------------->WRI1  <---------LBD16<------ZmHOX2a(1)                   <---------At4g35610  -   ttccgagaaatcatcgacgtaggagaggaacgcggggccggagaaggagatttctcgaatgcagcgttggagttggaattgagcacctggtcgaggagga  4532900                                                                        <---------ANAC46                                                                        --------->ALFIN1                                                                        <---------DEAR3(1)                                                                       --------->ATERF1(1)                                                                       <---------LBD16                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                       <------NtERF2                                                                       <---------ABI4(1)                                                                      <---------RAP2.6(1)                                                                      <---------DEAR4(2)                                                                      <---------ATERF1(1)                                                                      <---------ORA47(2)                                                                      <---------ERF1                                                                      ------>NtERF2                                                                      <---------RAP2.3(1)                                                                      <---------RRTF1(1)                                                                     <---------RRTF1(2)                                                                     <---------RRTF1(3)                                                                     <---------ANAC46                                                                     <---------RAP2.3(3)                                                                     --------->ATERF1(2)                                                                     <---------ATERF1(2)                                                                     <---------DEAR3(1)                                                                     --------->ALFIN1                                                                     --------->DEAR3(1)                                                                     <---------RAP2.3(2)                                                                     <---------RAP2.6(2)                                                                    --------->DREB2C(1)                                                                    --------->RAP2.3(1)                                                                    --------->At4g35610                                                                    <---------At4g35610                                                                    <---------ABI4(1)                                                                    <------NtERF2                                                                    --------->DEAR4(2)                                                                    --------->ATERF1(1)                                                                   <---------ATERF1(1)                                                                   <---------DEAR4(2)                                                                   <---------RAP2.6(1)        --------->At4g35610                                        ------>NtERF2   <---------HSFB2a(2)                                             <---------ORA47(2)   <---------LBD16                                                 <---------RRTF1(1)  =================================HOX2a_HOX2a                     <---------ERF1  ------>ZmHOX2a(2)                                                <---------RAP2.3(1) ==================================HOX2a_HOX2a                    <---------DEAR3(1) <------ZmHOX2a(2)                                                <---------ATERF1(2) <---------GLK1(1)                                                --------->ATERF1(2) -------->ARR14(3)                                                <---------RAP2.3(2) -------->ARR14(2)                                                <---------ANAC46 ---------ARR11(3)                                                <---------RRTF1(3) ---------ARR14(2)                                                <---------RRTF1(2) ---------AGP1                                                    <---------DREB2C(2) ---------ARR14(3)                                                <---------RAP2.3(3) ----->DOF2                                             <---------HSFB2a(1) ========HOX2a_HOX2a                   <------ZmHOX2a(2)--------->HSFB2a(1) ========HOX2a_HOX2a           --------->ZAT2           --------->HSFC1(2)<------NtERF2 =======HOX2a_HOX2a            <---------ZAT2      <---------------------WRI1    <------ZmHOX2a(1) =======HOX2a_HOX2a         ==================HOX2a_HOX2a --------->GLK1(2)  <------ZmHOX2a(1)<------ -ZmHOX2a(1)                <------ZmHOX2a(1) --------->GLK1(1)  --------->RAP2.6(3)          <------ -------->ARR11(3) <---------YAB1 <---------LBD16  <---------LBD16<---------RAP2.6(2)         <------   aagatctcggagatgaagatgatgaatagaggaagctcgggatcagagaattcttcggagattccatggcggcggcggaggaaggagatggagatagcgt  4533000                                          --------->ANAC58                                          --------->ANAC58                                        <--                                  ------>ZmHOX2a(2)                     *TSS                     ----                                 <------ZmHOX2a(2)                     ----------->GT1         <-----                              --------->LBD16<----------DOF2          <---------TOE2(3)        <-----        --------->CCA1(2)<XXXXXXXXXXXXXXXXXXXXMIR832-5P             <---------ATHB12      <---------LBD16 ---ANAC58     <------NtERF2 <---------HSFB2a(2)            --------->ANAC58      <---------HSFB2a(2) ---ANAC46   <---------DEAR3(1) --------->ARR14(2)          --------->ANAC58   --------->ZAT6  ------ ---ANAC58  --------->ATERF1(1) <---------ARR14(2)        ---------->DOF2    <-----------GT1  <------   ttgaaatgagagacggaggcgatgtttgattcccgatctcactcacgctttgccaaaaccaaaagcaccaatgaggtattaactctcgaaactcgggctt  4533100                                                <---------ANAC55(2)                                                <---------YAB1                                           <--------HAHB4                                           <---------ICU4                                           --------->YAB1                               --------->ARR14(2)            --------->GLK1(2)  <---------ARR14(2)     ----------->HVH21 ----------CBF                <----------TaMYB80--------->ANAC58 ----->ATHB12<---------At4g35610   <----------DOF2---------->DOF2     <-----------------AGL1 -----DOF2 <---------GLK1(2) ---------->TaMYB80 --------->ANAC58    <-----------GT1      <----------DOF2 ----------AGL15         --------->ANAC58 <---------ATHB51    <---------YAB1             <---------DAG2 --------->AGL15         --------->ANAC46 --------->ICU4    ----------->GT1<---------ANAC58 -----------AGL1         --------->ANAC58 <---------YAB1  <------------CBF <---------ANAC58   tattgggcaaatggaatctgatggaacaaggcatatactttgcgataattacgaaagtgacattgttattttacctgtcttggcccatgggctttttcaa  4533200                      ---------->DOF2              <---------WRKY18(1)             --------->WRKY45                                     <----------DOF2             ----------->HVH21       <----------ID1            *TSS  <---------MYB46(3)             --------->WRKY12----------->GT1  ------------>CBF<---------CCA1(2)              --------             --------->WRKY38(1)   --------->MYB52(1) <---------AHL20(2)            --------->GLK1(2)            <---------MYB52(1)     <-----------GT1   <---------YAB1  <-----------RAV1(1)     --------   gagacataagacccgttgacccattaaagggctgtattaacgacaagttccaatttttatttgtttatcttttgttggaaaatgaaattctaaaacccta  4533300                                       --------->MYB52(1)                                       <---------At5g28300                                ----------->RAV1(1)                                ------>NtERF2                               --------->DREB2C(2)                               --------->DEAR4(1)                               <---------ETT(1)                               ----------->HVH21                               --------->At1g77200                 <---------TOE2(3)                               --------->RAP2.3(3)                <---------DOF5.7(2)      ------>MYB83             --------->DEAR3(1)                <---------WRKY12      -------->P              --------->RAP2.3(1)                <---------WRKY38(1)      ------>MYB46(1) --------->ARR11(3)      <---------REM1(2)  <---------WRKY45 ->TOE1(3)            <---------ARR11(3)  --------->ANAC46      --------->DOF5.7(2)            ------ ->TOE2(3)           --------->At4g35610<---------LBD16    <---------ZAT2             --------->ATHB12   aaaaatccaaccagaagggtagaagctctctcgccgacaattaccggctacaaggtttctctgctcgtcaacgttgtaagttatttcttcattgtaatca  4533400                                                                                        <---------ARR14(2)                                                                                        ------->TEIL                                                                                        <-----------ARR10                                                                                        --------->GLK1(2)                                                                        --------->YAB1  --------->ARR14(2)                                                                      <---------WOX13(1)<---------ARR11(1)                                                                  <---------TOE2(3)    <---------CCA1(2)              ----------->GT1                                     --------->ANAC55(2)  <---------ARR14(1)              <------MYB83                     --------->ANAC46   <---------ANAC55(2)<---------ANAC58              <------MYB46(1)<----------DOF2   --------->LBD16  <-----------GT1  <---------ANAC58   <     <---------AtLEC2       <---------ANAC58  <---------HSFB2a(2) <---------ANAC46   <---------ANAC58   <XXXXXXXXXXXXXXXXXXXXMIR778          --------->ICU4   --------->At4g35610     <---------ANAC58<--- --->YAB1    --------->MYB59<---------ANAC58  --------->HSFB2a(2)<---------LBD16--------->ZAT2<------   aatttgtgcatgaattaggtcaaattagtagcttttgtagtaattcttcccgaaatgagagcttaattacggattgataacgagcttgcgaatcttatcg  4533500             <---------ZAT2             --------->At4g35610             <---------At4g35610                                                            ---------             --------->ZAT2                                                                 ---------            ------->TEIL                                                               <---------At4g35610  --------->MYB52(2)                                               --------->MYB52(1)  --------->At4g35610 ---------ANAC46                 ---------->DOF2               --------->DAG2        <------ZmHOX2a(1) ------MYB52(1)       --------->ATHB12                      --------->LBD16 <---------AHL20(2)   <--- ---YAB1 --------->AtLEC2<---------ZAT6     <---------CCA1(2) ---------->DOF2---------->DOF2---------   ttgtttgtttcatgcagctctgaattagtggtattgaaagatgagcttatctcagaatgctccgaaaagtaagggtattaaaagagaggagctcaagaaa  4533600                                           <---------ARR11(3)                                           --------->ARR11(3)                                         <---------YAB1                                       --------->YAB1                                      <---------ATHB12                                    <---------At4g35610       --------->ARR11(3)          <---------TOE1(1)       <---------ARR11(3)          <---------TOE2(1) --------->SPL7                <---------ANAC58   --------->STY1(1) >ANAC58                       <---------ANAC58   <---------STY1(1)                               --- >ANAC46                      --------->MYB59------>ZmHOX2a(2)                          --------->GLK1(2) ------------AtSPL8  ===============================HOX2a_HOX2a  ---------->DOF2   --------->At4g35610 >ANAC58             <------ZmHOX2a(1)--------->ICU4    ---------->DOF2       <------ZmHOX2a(1)  <---   cagtacgaagatgttgaagatgaggaagagattgggtccgatgatgatctcactaggggaaagagaagaaagacagagaaggagaagcagaagctagaag  4533700                                                                          <------ZmHOX2a(1)                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                    <------MYB46(1)                                                                    <------MYB83                                                                   --------->MYB59                                                                   <---------MYB46(3)                                                                   --------->MYB46(2)                                                               <---------ANAC55(2)                                                               <---------ANAC58                                                               <---------YAB1                                                               <---------ANAC55(1)                                                               <---------ANAC58                                                               <---------ANAC46          <---------HSFB2a(1)                                                          ------>ZmHOX2a(1)              --------->HSFC1(2)       ----------->GT1                             --------->ZAT14<---------MYB55(1)     <---------HSFC1(2)   --------->ARR14(2)                            --------->ZAT14 <---------MYB52(1)      <---------MYB46(3)   <---------ARR14(2)         --------->GLK1(2)--------->ZAT6  --------->ANAC55(2)      <------------ ------>GLK1(2)     --------->DAG2         <-----------HVH21<---------MYB52(1)   >>>>>>>>>TBF1   <--- ------ARR14(2)    ---------->DOF2     <---------LBD16  ----------->RAV1(2)   >>>>>>>>>TBF1  <-------   aatcggaactggttgaaatgaaaaagcttgagaatttgatattcgggtcactctactctcctgttacgtttggtaaggaagaagaagaagatggttcggc  4533800  Previous    Next  AGI:  At5g14040.1    Description:  mitochondrial phosphate transporter. similar to mitochondrial phosphate transporter, putative [Arabidopsis thaliana] (TAIR:AT3G48850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49083.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) Range:  from: 4530645    to: 4533072    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g14050.1    Description:  transducin family protein / WD-40 repeat family protein. Identical to U3 small nucleolar RNA-associated protein 18 homolog [Arabidopsis Thaliana] (GB:Q9FMU5); similar to TAF5 (TBP-ASSOCIATED FACTOR 5), nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G25150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17049.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49884.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22639.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro Range:  from: 4533263    to: 4535303    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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