Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->ANAC58                                  --------->ANAC46                                  --------->ANAC58                                 <-------MYC3                                 ------->MYC3                                --------->ANAC46                               <---------LBD16                              <---------ALFIN1    <---------ANAC46                           --------->ARR14(2)    <---------At4g35610 <---------ICU4      --------->TOE2(3)    <---------ARR14(2) <---------ANAC58       --------->YAB1              ---- <---------MYB52(1)   --------->TOE2(3)       <---------ANAC58       <--------HAHB4     <----------DOF2 ------->ID1         --------->TGA1a    <---------ANAC58             --------->ATHB12   ============= --TEIL            <---------ALFIN1     <---------ANAC58           --------->GLK1(2)    <---------DAG2   gtcgttaatctcaaccttctctcacctcagttccacgcgtaagcgtgtgcttgctgatacaggctgaagaatcatttcgatttcttcacacttttttttg  4508100                             <-----------TGA1                             --------->TOE2(3)                             <-----------HVH21                       <---------ANAC58               --------->MYB52(2)              --------->SPL7<---------O2              ------->TEIL  --------->O2              <-------TEIL  --------->TGA1a             <---------MYB52(1)             <---------SPL1(1)            <---------SPL7--------->MYB52(1)           <---------ANAC58 <---------bZIP60(1)              <---------YAB1          ------>ZmHOX2a(2) --------->bZIP60(1)           <---------YAB1               --------->AHL20(2)        ------------------>SPL14                         <---------AHL20(2)          <xxxxxxxxxxxxxxx      <---------YAB1   <---------ANAC58      --------->GLK1(1)               --------->ZAT14 ------>ID1<---------ANAC58 <---------TGA1a  --------->At4g35610             <---------ZAT14        - =====================================bZIP_DOF          --------->YAB1   <-----------GT1     <-------   tccgatttatgatccgtacgttggagcgtaacgtcagttctaagagcatctccatagattataatttttggagtttttcttcactgaaataatataaaca  4508200                                                                                  --------->ATHB12                                                                                  --------->ATHB51                                                                                 <---------YAB1                                                                                 <---------AHL20(2)                                                                         <------NtERF2                                                                        <---------MYB46(3)                                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                       --------->ALFIN1                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                              <------ZmHOX2a(1)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            <---------TOE1(3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->DAG2     <---------ICU4                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)   ---------->DOF2    --------->ICU4       --------->REM1(2)        <---------AtMYB61 xxxxxxxsmallRNA(si3) <---------YAB1    --------------->AGL15    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -------->YAB1      --------->YAB1      <---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)-------- ----GT1  <------ZmHOX2a(1) <---------TOE2(3)---------->DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--   attcataaaggaggagagaataacataattaaggaaacgtttctgtgtaaagaaattttgtaagtttgcataggtggctgtttataattggacaattgaa  4508300                                           --------->TOE2(3)                                         --------->AHL20(1)                                         <---------AHL20(1)                                         --------->AHL20(2)                                         <---------AHL20(2)                                      --------->AHL20(2)                            <---------AHL20(2)               <---------AHL20(2)     <---------AHL20(2)              <---------AHL20(1)      <---------AHL20(1)              --------->AHL20(2)      --------->AHL20(1)           --------->AHL20(1)      --------->YAB1                                       <---------ARR14(2)           --------->AHL20(2)    <---------AHL20(2)                                     --------->ARR14(2)           <---------AHL20(2)    --------->AHL20(1)                                  --------->YAB1          <---------AHL20(2)--------->AHL20(2)                                    --------->YAB1          --------->AHL20(2)--------->AHL20(1)                                    <xxxxxxxxxxxxxxxxxx      --------->AHL20(2)   <---------AHL20(2)--------->AHL20(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----------->GT1   <-----------GT1<---------YAB1                          <---------TOE2(3) <----------ID1--------->AHL20(2)--------->AHL20(2) <----------DOF2       <---------TOE1(3)   <xxxxxx --->GT1--------->YAB1     --------->AHL20(2)<---------AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------->DOF2<---------AHL20(2)--------->YAB1<---------AHL20(2)     <----------DOF2 <xxxxxxxxxxxxxxx   aaaaagaaaaaaataatttaattacaaaattaaattataataaaatattaatttcttttgtttttgagaaactttgaaggtttctcatcatattcgactc  4508400           --------->HSFB2a(1)          ------>MYB46(1)          ------>MYB83          -------->P                                                               --------->ANAC58        ------->GAMYB --------->ARR14(2)                                           --------->ANAC55(2)       --------->MYB46(3)                                                          --------->ANAC58       <---------MYB52(2)                                                          <---------ANAC55(2)       <---------MYB55(2)      <---------ZAT2                                 <---------TOE2(3)      -------->P      <---------GLK1(2)                 --------->ALFIN1     ---------->DOF2    <xxxxxxxxxxxxxxxxsmallRNA(i)                      <---------ANAC58     <---------YAB1  <xxxxxxxxxxxxxxxxsmallRNA(s) --------->ZAT2         <---------ANAC58  --------------->AGL15     *TSS --------->ZAT6    <---------HSFB2a(2)                <---------ANAC46  <---------------AGL15     <-- xxxxxsmallRNA(le3)--------->HSFB2a(2)              <---------ANAC46   --------->ANAC55(2)       ---- xxxxxxxxxxxxxxsmallRNA(le3)---------->DOF2   <---------TOE1(3)        <---------ANAC55(2)     <----- xxxxxxxxsmallRNA(si3)<---------ARR14(2)      <---------TOE2(3)    <-----------HVH21  --------->MYB52(1)   caaacactaaccaaccttcttctagattctcaaagctggaaatggcctaaggttttgtgtgtggataagggtcacttattaaagtaagtaatggattatt  4508500                                                              --------->ARR14(2)                                                              <---------ARR11(3)                                                              <---------ARR14(2)                                                              --------->ARR11(3)               >>>>>>                                                              --------->GLK1(2)               -------                                                              <---------ARR11(1)              -------          <------ZmHOX2a(1)                                   <-----------ARR10               -------       --------->DAG2                                        <---------CCA1(2)              <--------      ---------->DOF2                                    ----------->GT1             <---------YAB1 -------TOE2(3)     <---------LBD16                     <----------ID1        <-----------HVH21>>>>>> ------>DOF2 ----------->RAV1(1)                      --------->DAG2          <-----------TGA1------- ----YAB1<----------ID1     ---------->DOF2          ---------->DOF2       ------>ZmHOX2a(1)---------   aaagaagaaaaaggacaacattttcggaaacaaagttgagagttttgagagttgaaaaagggcaaatctttcttctccttcgtcactctaattgagttga  4508600                              ------>ZmHOX2a(2) >>>>WRKY11                 <---------ARR14(2) -->WRKY45                  ------->TEIL -->ZAT18                   <---------AGP1 -->WRKY38(1)               --------->ARR14(2) -At4g35610                 --------->ARR11(3)                                  <---------TOE1(2) >>>>WRKY6                  <---------ARR11(3)                       --------->GLK1(2) -->WRKY12      <---------HSFB2a(2)          <-----------RAV1(1)    <---------GLK1(1)      <-------TEIL >At4g35610     --------->HSFB2a(2)     --------->GLK1(2)           <---------GLK1(2)  <---------TOE2(3)   ctaaacacagttcgagttcgagagacaatggatcttgctaagtttctgtgttggattgttttgctactgggaatctcactcgtagaatcaaggtacatgg  4508700                                                                           <------MYB46(1)                                                                           <------MYB83                                                                          <---------DEAR3(1)                                                                         <--------P                                                                        <---------ANAC58                                                                        <---------ANAC58----------->HVH21                                                                        <-------GAMYB   --------->WRKY12                                                                       --------->MYB52(2)                                --------->TOE2(3)   ------>ZmHOX2a(1)  <---------MYB46(3)                         ------>ZmHOX2a(1)      --------->ARR14(2)     --------->ATHB12 --------->WRKY38(1)                         --------->HSFB2a(2)    <---------ARR14(2)     <------MYB46(1)  --------->WRKY45                         <---------HSFB2a(2)  <---------MYB46(3)       --------->MYB55(2)<---------WRKY18(1)                         --------->LBD16     --------->ALFIN1          <------MYB83    <---------MYB52(1)                        <---------ANAC46    <-------MYC3              <---------AtMYB61--------->DOF5.7(2)                        <---------LBD16     ------->MYC3           <-----------RAV1(1)<-------GAMYB <   tctacaatacttcacataccattgttcctggaaaacttaatgtccatgtggttcctcattctcacgatgatgttggttggctcaagaccgttgaccagta  4508800                                                                            <---------------AtSPL8                                                                            --------------->AtSPL8                                                                      --------->ARR11(3)                                                                      <---------GLK1(2)                                     <----------DOF2                ----------->ARR10                            <----------DOF2                   <---------TOE2(3)                         <---------ARR11(3)            <-----------------AGL2            --------->MYB46(3)  ---------->ID1         <-----------------AGL3            <----------- -----------RAV1(1)    --------->LBD16                <---------At4g35610   --------------->AtSPL3<--   ctatgttggctccaacaactctatccaggtctttgccctctttctattgttcttgtagctgtttatggattagattttgtggtacttacttcgtttttgt  4508900                  <---------ANAC58                  <---------ANAC46             <------MYB83             <---------MYB46(3)                               <---------At4g35610             <------MYB46(1)                                 <---------MYB46(3)            <---------TOE2(2)                              <---------MYB52(1)            <---------TOE1(2)                             <-------GAMYB       <---------ANAC58                                  <---------MYB46(3)       <---------ANAC58                                  <-----------RAV1(1)     <-------TEIL <---------YAB1<--------P                              <---------At4g35610----------->GT1        ---- -------------ANAC81                                 <---------ZAT14   <---------GLK1(2)<-----------RAV1(1) -------AHL20(2)  <---------ANAC58                  ------>ZmHOX2a(1)----------->ARR10 <---------TOE2(3)   tttatttttgctcgtaggttgcttgtgttcaaaatgtactggattcaattgttcctgcgctgttggctgataagaatcgcaaattcatttatgttgaaca  4509000  Previous    Next  AGI:  At5g13980.1    Description:  glycosyl hydrolase family 38 protein. similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT3G26720.2); similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT3G26720.1); similar to glycosyl hydrolase family 38 protein [Arabidopsis thaliana] (TAIR:AT5G66150.1); similar to Glycosyl hydrolases family 38 protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABG22500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49101.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68107.1); contains InterPro domain Glycoside hydrolase-type carbohydrate-binding; (InterPro:I Range:  from: 4508498    to: 4514427    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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