Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->ANAC58                                         --------->ANAC58                                       <---------DOF5.7(2)                                      <---------ARR14(2)                                      --------->ARR14(2)                                     --------->DOF5.7(2)                                   <---------ANAC46                                                --           <---------ANAC58        <---------ANAC58                                         ---------           <---------ANAC46        <---------ANAC58                                        --------->At4g35610     <-----------GT1      <---------At4g35610                                              <---------At4g35610 ------>ANAC58            --------->At4g35610                                       <-----------HVH21 ------>ANAC58            <---------ZAT2 --------->ANAC46  ----------->GT1  <---------AtMYB61      -- ----->DOF2<---------ANAC58 ----------->HVH21    --------->At4g35610      <----------DOF2  --------->ZAT2   aagcaattcacttacttggaaggaagagagctgaagggcgtaaacgaaattagcagaagatgcgaaaaataagcgactttggtcgatgtcataagctgcg  4415400                                                    ---------->DOF2                                                --------->HSFB2a(2)                                                <---------HSFB2a(2)                                                --------->LBD16                                            --------->TOE2(2)                                            --------->TOE1(2)                                           <---------HSFB2a(1)                                           --------->HSFB2a(1)                                           --------->MYB46(3)                                     ---                                           <---------HSFC1(2)                            ------------                                           --------->HSFC1(2)                            ------------ ------------->AtSPL3                    --------->ARR14(2)                              <---------ICU4 >TOE1(2)                                <---------ARR14(2)                     ----------->GT1------ ------------->AtSPL8                   <------ZmHOX2a(1)         <-----------GT1      --------->GLK1(2)   aactgtacaacttcttcagtcgaatgcaattggatgttctgaggaacctccgagaaaagcttcaaatttttcattttcgaagaagtaagaatcagtacaa  4415500                              <---------At4g35610                           <------ZmHOX2a(1)                         --------->LBD16                        <-----------RAV1(2)        <----------DOF2 <---------LBD16                                <---------TOE1(3)      ------->TEIL    <------ZmHOX2a(2)         --------->GLK1(1)      <---------TOE2(3)    ------->GAMYB     --------->CCA1(2)         <---------GLK1(1) <---------ICU4        --------->ANAC46   <---------MYB52(2)--------->AGP1          --------->LBD16     --------->ICU4         --------->ANAC58   --------->MYB46(3)--------->ARR11(3)    <---------LBD16     --------->YAB1   --------->TOE1(3) ------>TOE2(3)      --------->ARR14(2)  --------->ANAC46      --------->AHL20(2)       --------->ANAC58 --->AtSPL3          <---------ARR14(2)<-----------GT1      --------->YAB1      <---------MYB59 --->AtSPL8   <---------At4g35610    <---------AHL20(2)    <---------YAB1       --------->TOE2(3) ----->RAV1(1)--------->At4g35610 <---------ARR14(2)      --------->AHL20(2) <-----------GT1   catcaacgaactttgcagctacagatccaggaagcagatttaaaccccagaaatcactgatataataatatttagggtttaacctaaaacacgccttctt  4415600                                                                                    --------->ARR11(3)                                                                                  <---------MYB52(1)                                                                            --------->ANAC46                                <---------ANAC58                          <---------ALFIN1         <------------------------ANAC81                               <-----------GT1        <----------DOF2      <----------DOF2                  --------->LBD16--------->MYB52(1)     <-----------GT1     ------>ZmHOX2a(1)                  <---------LBD16 <---------ALFIN1 <------------------------ANAC81<---------ANAC58        ----------->HVH21 --------->AtMYB61    <-----   ctctgtttttcttttcttctctgtttcctctctttcgttttgctataaacttgaaaaactgacccggtttattttaccacaccggttatcttggtttata  4415700                                 --------->LBD16                             <-----------GT1                           <---------YAB1                        <---------YAB1                        <---------AHL20(2)                       <---------AHL20(1)                     <---------AHL20(2)            <------ZmHOX2a(2)                    --------->YAB1------>NtERF2  <---------GLK1(1)                                ---                  --------->AHL20(2)   <----------DOF2                       <---------GLK1(2)   ----                  --------->AHL20(1)   <---------DAG2                 <---------ANAC58          -----                  <---------AHL20(1)<---------ALFIN1     *TSS         <---------ANAC58        <------ZmHOX2a(1) ------GT1       --------->YAB1<---------LBD16   --------->GLK1(1)<----------DOF2   --------->ZAT6---   ccggtttagtttgtaagaaatataatattattatccggccactttcttcagagatcagttttctatgcctttccttgctgattctctcactagtgaggaa  4415800        --------->AtLEC2     <---------YAB1   --------->YAB1 ------>ANAC58                   <---------MYB46(3)    <-----------GT1                              < ----->DAG2                      <------MYB46(1)   <----------DOF2                                  < ----->DOF2                      <------MYB83<---------ICU4                                         < ------>ANAC58               <-----------RAV1(1)<-----------GT1      <-----------HVH21             --   aagcatcatcatgcattccatcaaattggttttgttggttttgttgataatttcttttcactctcaaactgtgtcaaaacatcatccaactattgatggt  4415900             <---------GLK1(2)        <---------MYB52(1)   <---------WRKY18(1)  ----------->HVH21                                  ---------->DOF2 <---------WOX13(1)        ------>MYB83            --------->At4g35610             --------->MYB46(3) <----------DOF2           ------>MYB46(1)        ----------->RAV1(1)             --------->ANAC58 ---------ANAC58         <---------MYB59        <---------At4g35610               --------->ANAC58 ---------ANAC58      <-----------GT1           --------->At4g35610       <---------At4g35610 ---------AtLEC2 <----------DOF2            --------->GLK1(2)--------->ATHB12   <---------ALFIN1 ------->At4g35610 <---------ICU4          --------->YAB1----------->GT1  --------->At4g35610   <----   ctgcttgaccgtttggattctttattaccaacttcttctgtacaagaatcagcagcaaagggtttattgcagagactgcttcccacccattctcagagct  4416000                                                   <---------YAB1                            <----------DOF2   <---------ALFIN1                                    <--                   --------->HSFB2a(1)       <------NtERF2                                        <--                ---------->DOF2            --------->PCF2                  <---------WOX13(1)     <-- <---------At4g35610  <-------TEIL    ------>ZmHOX2a(1) <------MYB46(1)  --------->ATHB12     <------ZmHOX2a(1) --------->At4g35610 --------->ARR14(2)    <---------TCP15(1)           <---------YAB1  <---------YAB1 ------DOF2  --------->TOE2(3)       --------->TOE2(3)  <------MYB83    --------->ICU4<-----------GT1   ttgagctcagaattatctcaaaggttcttccttttatttccttaggccccactatgctaggtgattcttcagtactgattgttttttgttacaataggat  4416100                                                                                        =============                                                                                        ------>ZmHOX2a(1)             <---------At4g35610                                                       --------------             --------->ZAT2                                                           ---------------             <---------ZAT2                                                           <--------------             --------->At4g35610                                                   --------->GLK1(1)           <-----------RAV1(2)               ----------->HVH21                  <---------YAB1       <---------SPL7                       --------->LBD16               --------->ARR14(2)      <---------MYB46(3)                    <------NtERF2                 <---------ARR14(2)     <---------AtMYB61                     <------NtERF2                  <-----------ARR10  <---------AtMYB61                        <---------LBD16                <---------ARR11(3) -------ANAC58                            <---------LBD16                 --------->ARR11(3)       -- -------ANAC46        <---------YAB1--------->YAB1                 <---------HSFB2a(2)<-------------- -------ANAC58    <----------DOF2  <---------YAB1               --------->GLK1(2)  <---------GLK1(1)   gcttgtggtggtaccagctgctttgtaattgaaaactatgatggcccgggacgaattggacctgaaattctgtaagtatcttctgatttcctgatgaggg  4416200 =====HOX2a_HOX2a                                                                  --------->HSFB2a(2) ->AGL15                                              ---------->DOF2            ----------->RAV1(2) -->AGL1                                          <------ZmHOX2a(1)             <----------DOF2 ---AGL1                                        <---------TOE1(2)              <---------ANAC58 ---->ZmHOX2a(2)                <-----------GT1<---------LBD16                 <---------ANAC58 ---AG<-----------GT1  <----------DOF2         <-----------RAV1(2)       <---------TOE2(3)--------->ATHB12   atcgaattttacttaaaattcttctcttttagttttgccatcttgtgtctcaggattaaaggcacaactggagttgagattgcttctgggctccattggt  4416300  Previous    Next  AGI:  At5g13680.1    Description:  ABO1/ELO2 (ABA-OVERLY SENSITIVE 1); transcription elongation regulator. similar to unnamed protein product [Vitis vinifera] (GB:CAO69242.1); similar to hypothetical protein OsJ_023788 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40305.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82069.1); contains InterPro domain IKI3 (InterPro:IPR006849); contains InterPro domain WD40 repeat-like (InterPro:IPR011046) Range:  from: 4410364    to: 4415474    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g13690.1    Description:  alpha-N-acetylglucosaminidase family / NAGLU family. similar to alpha-N-acetylglucosaminidase [Nicotiana tabacum] (GB:CAA77084.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40787.1); similar to hypothetical protein OsI_011287 [Oryza sativa (indica cultivar-group)] (GB:EAY90054.1); contains InterPro domain Alpha-N-acetylglucosaminidase (InterPro:IPR007781) Range:  from: 4415757    to: 4420374    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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