Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ANAC58                                              --------->ANAC58                                       --------->AtMYB61                                           <-                                     <---------ARR14(2)                                            --        --------->GLK1(1)            --------->ARR14(2)                                      <-------        <---------GLK1(1)        --------->At4g35610                                        <-------TEIL <---------RAP2.6(3)             --------->ZAT14                 <---------ALFIN1     --------->ANAC58 ---------ANAC58                 <---------ZAT14                 ---------->CDC5      --------->ANAC46 ---------ANAC58        <---------ARR11(3)<---------ALFIN1<----------DOF2         ----------->RAV1(1) ---->DOF2    <-----------RAV1(2)<---------At4g35610    <---------DAG2 <----------DOF2--------->ANAC58   agccgtgatgaaatccccaggctcaatatcaatactgcagacctccacaggcatagcactctttgccccagcgctttcattctgccacaagaaatacata  4415100                                                                                              -------                                                                                              <------        ---------->DOF2                                  <-------TEIL           ---------->DOF2  ---------->DOF2                            <---------ZAT14                  --------->YAB1--------- --------------AGL15                         --------->ZAT14      --------->ANAC58       --------->AHL20(2) ------->YAB1         --------->AHL20(2)     <---------ZAT18      --------->ANAC46--------->ANAC58 --ANAC55(2)          <---------AHL20(2)     --------->ZAT18      --------->ANAC58--------->ANAC58   aacataaagagaaagactttcgatttaaacagaccctactcgctaagttcacttgcaagttcatccacaagaaacttgaatcaaaagcaaaataaaaaga  4415200                                                     --------->At4g35610            <---------ARR14(2)                                                     <---------At4g35610            <---------GLK1(2)                                             --------------->AGL15            <---------ARR14(2)                           <----------DOF2   --------->TOE2(3)                --------->ARR14(2)                           <---------DAG2    <---------------AGL15           <------ZmHOX2a(1)                        <---------ALFIN1    ----------------->AGL3    --------->TOE1(2)           --- ---->GT1           --------->ZAT18         ----------------->AGL1    --------->TOE2(2)           --- ----ID1       ---------->DOF2 <-----------GT1------>ZmHOX2a(1)<------ZmHOX2a(1)    --------->ARR14(2) ->DOF2<----------DOF2 <---------ALFIN1     ----------------->AG     --------->MYB46(3)         -----   aaaatccatctttagaccaaagtccccaacttttttctcactcgtttccttattaagcagaaacaggattaaccaaggaggaaacgaattctctcacaga  4415300                                         --------->ANAC58                                         --------->ANAC46                                       <---------DOF5.7(2)                                      <---------ARR14(2)                                      --------->ARR14(2)                                     --------->DOF5.7(2)                                   <---------ANAC58                                                --           <---------ANAC46        <---------ANAC58                                         ---------           <---------ANAC58        <---------ANAC46                                        --------->ZAT2     <-----------GT1      --------->At4g35610                                              <---------At4g35610 ------>ANAC58            <---------At4g35610                                       <-----------HVH21 ------>ANAC58            <---------ZAT2 --------->ANAC58  ----------->GT1  <---------AtMYB61      -- ----->DOF2<---------ANAC58 ----------->HVH21    --------->At4g35610      <----------DOF2  --------->At4g35610   aagcaattcacttacttggaaggaagagagctgaagggcgtaaacgaaattagcagaagatgcgaaaaataagcgactttggtcgatgtcataagctgcg  4415400                                                    ---------->DOF2                                                --------->HSFB2a(2)                                                --------->LBD16                                                <---------HSFB2a(2)                                            --------->TOE2(2)                                            --------->TOE1(2)                                           <---------HSFC1(2)                                           --------->HSFB2a(1)                                           --------->MYB46(3)                                     ---                                           <---------HSFB2a(1)                           ------------                                           --------->HSFC1(2)                            <---------ICU4 ------------->AtSPL3                    <---------ARR14(2)                              ------------ >TOE1(2)                                --------->ARR14(2)                     ----------->GT1------ ------------->AtSPL8                   <------ZmHOX2a(1)         <-----------GT1      --------->GLK1(2)   aactgtacaacttcttcagtcgaatgcaattggatgttctgaggaacctccgagaaaagcttcaaatttttcattttcgaagaagtaagaatcagtacaa  4415500                              <---------At4g35610                           <------ZmHOX2a(1)                         --------->LBD16                        <-----------RAV1(2)        <----------DOF2 <---------LBD16                                <---------TOE1(3)      ------->TEIL    <------ZmHOX2a(2)         <---------GLK1(1)      <---------TOE2(3)    ------->GAMYB     --------->CCA1(2)         --------->GLK1(1) <---------ICU4        --------->ANAC58   --------->MYB46(3)--------->AGP1          --------->LBD16     --------->ICU4         --------->ANAC46   <---------MYB52(2)--------->ARR14(2)    <---------LBD16     --------->AHL20(2)       --------->ANAC58 ------>TOE2(3)      --------->ARR11(3)  --------->ANAC46      --------->YAB1   --------->TOE1(3) --->AtSPL8          <---------ARR14(2)<-----------GT1      --------->YAB1      --------->TOE2(3) --->AtSPL3   --------->At4g35610    <---------AHL20(2)    <---------YAB1       <---------MYB59 ----->RAV1(1)<---------At4g35610 <---------ARR14(2)      --------->AHL20(2) <-----------GT1   catcaacgaactttgcagctacagatccaggaagcagatttaaaccccagaaatcactgatataataatatttagggtttaacctaaaacacgccttctt  4415600                                                                                    --------->ARR11(3)                                                                                  <---------MYB52(1)                                                                            --------->ANAC46                                <---------ANAC58                          <---------ALFIN1         <------------------------ANAC81                               <-----------GT1        <----------DOF2      <----------DOF2                  --------->LBD16--------->MYB52(1)     <-----------GT1     ------>ZmHOX2a(1)                  <---------LBD16 <---------ALFIN1 <------------------------ANAC81<---------ANAC58        ----------->HVH21 --------->AtMYB61    <-----   ctctgtttttcttttcttctctgtttcctctctttcgttttgctataaacttgaaaaactgacccggtttattttaccacaccggttatcttggtttata  4415700                                 --------->LBD16                             <-----------GT1                           <---------YAB1                        <---------YAB1                        <---------AHL20(2)                       <---------AHL20(1)                     <---------AHL20(2)            <------ZmHOX2a(2)                    --------->YAB1------>NtERF2  --------->GLK1(1)                                ---                  <---------AHL20(1)   <---------DAG2                        <---------GLK1(2)   ----                  --------->AHL20(2)   <----------DOF2                <---------ANAC58          -----                  --------->AHL20(1)<---------ALFIN1     *TSS         <---------ANAC58        <------ZmHOX2a(1) ------GT1       --------->YAB1<---------LBD16   <---------GLK1(1)<----------DOF2   --------->ZAT6---   ccggtttagtttgtaagaaatataatattattatccggccactttcttcagagatcagttttctatgcctttccttgctgattctctcactagtgaggaa  4415800        --------->AtLEC2     <---------YAB1   --------->YAB1 ------>ANAC58                   <------MYB46(1)       <-----------GT1                              < ----->DAG2                      <---------MYB46(3)<----------DOF2                                  < ----->DOF2                      <------MYB83<---------ICU4                                         < ------>ANAC58               <-----------RAV1(1)<-----------GT1      <-----------HVH21             --   aagcatcatcatgcattccatcaaattggttttgttggttttgttgataatttcttttcactctcaaactgtgtcaaaacatcatccaactattgatggt  4415900             <---------GLK1(2)        <---------MYB52(1)   <---------WRKY18(1)  ----------->HVH21                                  ---------->DOF2 <---------WOX13(1)        ------>MYB83            --------->At4g35610             --------->MYB46(3) <----------DOF2           ------>MYB46(1)        ----------->RAV1(1)             --------->ANAC58 ---------ANAC58         <---------MYB59        --------->At4g35610               --------->ANAC58 ---------AtLEC2      <-----------GT1           <---------At4g35610       <---------At4g35610 ---------ANAC58 <----------DOF2            --------->GLK1(2)--------->ATHB12   <---------ALFIN1 ------->At4g35610 <---------ICU4          --------->YAB1----------->GT1  --------->At4g35610   <----   ctgcttgaccgtttggattctttattaccaacttcttctgtacaagaatcagcagcaaagggtttattgcagagactgcttcccacccattctcagagct  4416000  Previous    Next  AGI:  At5g13680.1    Description:  ABO1/ELO2 (ABA-OVERLY SENSITIVE 1); transcription elongation regulator. similar to unnamed protein product [Vitis vinifera] (GB:CAO69242.1); similar to hypothetical protein OsJ_023788 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40305.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82069.1); contains InterPro domain IKI3 (InterPro:IPR006849); contains InterPro domain WD40 repeat-like (InterPro:IPR011046) Range:  from: 4410364    to: 4415474    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g13690.1    Description:  alpha-N-acetylglucosaminidase family / NAGLU family. similar to alpha-N-acetylglucosaminidase [Nicotiana tabacum] (GB:CAA77084.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40787.1); similar to hypothetical protein OsI_011287 [Oryza sativa (indica cultivar-group)] (GB:EAY90054.1); contains InterPro domain Alpha-N-acetylglucosaminidase (InterPro:IPR007781) Range:  from: 4415757    to: 4420374    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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