Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <----------DOF2                                                                     -------         <---------ANAC58                                                                   ---------         <---------ANAC58                     ---------->DOF2                               <--------    <---------ICU4                       ----------->GT1                               ---------->DOF2   <------ZmHOX2a(2)     <-----------GT1<---------TOE2(3)                       ------>ZmHOX2a(2) -->ZmHOX2a(1)  ----------->HVH21       <---------TOE1(3)         ----------->GT1   <----------DOF2 ->ARR14(2)   --------->At4g35610     ---------->DOF2  <---------ANAC58       --------->ARR11(3)    > --ARR14(2)   <---------At4g35610--------->At4g35610   <---------ANAC58       <---------ARR11(3)    >   tttggatcatggctttagatgacaatgttacgaccagctataaaggttaaaagagtttcttatccgagtagtgaatcgatgatcttctttatagcgccct  4370300                                                                            <---------MYB59     <----------DOF2          <----------DOF2                              --------->ANAC58 -->RAP2.3(3)               ---------->ID1                                 --------->ANAC58 >ZAT18                    <-----------GT1                                ------->TEIL -ZAT18            --------->DAG2                                        <---------ALFIN1 >>>>>>>>MYB1     ---------->DOF2                ------->TEIL      --------->DAG2                  -- >>>>>>>>MYB2 --------->At4g35610       --------->AHL20(2)        ---------->DOF2             -------   ctaactgcttaatcgaagcagaaagtgtttttctttttagaataaaaaatgaactcacctataaaacaaaaagtcgcacctaaataagtgaagtttatgt  4370400                                                                                    <------NtERF2                                                                                   <---------MYB46(3)                                                                                  --------->ALFIN1                                                                                <------MYB46(1)                                                                                <---------ANAC58                                                                                <------MYB83 <-------                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                --------->ALFIN1<----                                                                               --------->MYB111(2)                           <---------ARR11(3)                                  --------->MYB111(1)     --------->ATHB12      --------->ARR11(3)                                  <---------DEAR3(1)     --------->YAB1       --------->RVE1(1)                                    --------->MYB55(2)     <---------ICU4       <---------RVE1(1)                                    --------->MYB46(2)<---    --------->ICU4        --------->GLK1(1)                                    <---------MYB46(3)----    <---------YAB1        <---------GLK1(1)                                   --------->ALFIN1 <----- ------->ZAT6            <---------ARR11(3)             ----------->GT1    --------->DAG2 --------->ALFIN1 -->ANAC55(2)            --------->ARR11(3)        <-----------GT1       ---------->DOF2  <---------AtMYB61   aatactatgattaccttggaaacaagagatatctcgagattgtttagtttttttcacattgtaatttgttagtataaaaggtgggtgggggaatggtggc  4370500                <---------ANAC46                                         ============================               <------NtERF2              --------->ANAC58               <---------TGA1a --RAP2.6(2)  --------->ZAT18     <---------WOX13(1)                     --------->O2               < -----ANAC46 --------->ALFIN1  <---------YAB1         =============================bZIP_DOF         < --------------AGL1       <-------TEIL    --------->ANAC46          ----------->HVH21          <----- ------------->AGL2  --------->AHL20(2)   --------->ANAC58      <---------GLK1(2)              <----- -NtERF2     <---------RAP2.6(2)--------->ATHB12      ---------->DOF2    <---------O2     <----------   ctaaattcggcaagggtggcctaaaaaatacatttgattgctatacgaaaacattttaaagaaacagaaactgacaagtggcattttgtgttttacactt  4370600             --------->MYB59    <---------ANAC58    <---------ANAC46    <---------ANAC58 =====bZIP_DOF ---------ANAC58                             <------------CBF                   ------>ZmHOX2a(1) ---------ANAC58                        --------->At4g35610                    --------->TOE2(3) -----DOF2   <---------TOE2(3)      --------->ANAC58                      <---------AHL20(2)   *TSS<- ----DAG2    <---------TOE1(3)      --------->ANAC58                     --------->AHL20(2)   ------- -GT1   <---------ANAC46 <-------TEIL --------->YAB1 <----------DOF2--------->YAB1      ---------->DOF2   ttacttgcttgtgtttaggtttggaggttcatctacataagcatcagcattgtgactttgactctccccatcaaaattaatcctaaaaatcaaagcatgt  4370700                            --------------->AGL15                            <---------------AGL15          ------->GAMYB    <-----------------AGL3          ==================================MADS_MADS          <---------ALFIN1 ----------------->AGL2          --------------->AGL15                         <---------MYB46(3)          ----------->RAV1(1)                           ----------->GT1                          ----        ------>MYB46(1)   <<<<<<<<<GATA-1              <---------TOE2(2)                      ------>NtERF2        ------>MYB83   <---------AHL20(2)      --------->AHL20(2)                  <----------DOF2---        -------->P    --------->AHL20(2)       <---------AHL20(2)                ------>ZmHOX2a(1)<-- ----------GT1  --------->YAB1--------->AHL20(2)<---------AHL20(2) <---------CCA1(2)          ------- ---->GT1--------->MYB46(3)----------------->AGL3      <---------TOE1(2)    <----------DOF2 <--------   taaacagcccaaccacattgagaattttatctataaatagaattagaaattaaatccttggttaaacccataactcttctttcctcttttcttctccggc  4370800                                                                                                  <--                                                                                                <----                                                                                              <------                                                                                          <----------                                                                                        <---------AtMYB61                                                                                    --------->TGA1a                                                          --------->YAB1            <---------ANAC46             ------>NtERF2                                --------->ANAC58          <---------ANAC58    --------->MYB52(2)                         --------->ANAC46       ---------->DOF2   --------->ALFIN1  <---------MYB52(1)    <-----------GT1       <---------LBD16         ========================bZIP_DOF ------->GAMYB     --------->MYB52(2)        <<<<<<<<<<E2Fd     ------->GAMYB       <---------ANAC58- ------->HVH21<------NtERF2                  <<<<<<<<<<E2Fe     ==============================MYC_MYB ------>MYB52(1)<-------GAMYB                <<<<<<<<<<E2Fc    <---------MYB52(2)   ================= -------DOF5.7(2)<---------MYB52(1)         <-----------GT1    --------->MYB46(3)   <---------O2<---- -->LBD16   --------->ANAC46               <-----------GT1--------->ANAC58          --------->O2----- -LBD16  ----------->HVH21  ------>ZmHOX2a(1)<<<<<<<<<<E2Fa  ----------->RAV1(1)    <---------TGA1a--   taacggtagttttgacgccgttagtttttcctccgtctattgatttttcccgcttcacaatcgcaacaaacccaaagaagaatgtctcgtgtggtcgcag  4370900                    <---------MYB52(1)                    --------->ARR14(2) --------->ANAC58   <---------ARR14(2) --------->ANAC58  <---------RAP2.6(3) <---------ETT(2) <---------ANAC58 -------SPL7<---------ANAC58 -----At4g35610   <---------ANAC58 -----RAV1(2)<-------GAMYB                                      --------->HSFB2a(2) -HVH21     <---------bZIP60(2) <------NtERF2           <------NtERF2 -------->SPL7--------->ATERF1(1)  --------->ALFIN1   <------NtERF2               <---------At4g35610 ====================MYC_MYB   --------->LBD16       ------>NtERF2         <-------TEIL           <-- --NtERF2   <---------ANAC58  --------->DEAR3(1)    <---------ANAC58     <---------SPL7          ---- ---->At4g35610  --------------->AtSPL3             <---------ANAC58    <---------HSFB2a(1)      <--- ---->NtERF2<---------ANAC46 <---------LBD16    <-----------RAV1(2)  --------->MYB46(3)          <---   cggacgacaatatggcgttgccgttcttctcgccggagtttggcaatgtctcaggcgcgtcgtcttctccaacaacgttcgcacagctcttgcaaaacgt  4371000                                                                     --------->SPL7                                                                   <---------SPL1(2)                                                                   <---------SPL7                                                                  <---------ANAC58                                                                  --------->ANAC55(2)                                                         --------->LBD16            <------NtERF2                                <---------SPL7  <---------MYB52(1)         <-------MYC3                                   --------->DEAR3(1) --------->MYB52(2)         ------->MYC3                                <---------DEAR3(1)<---------ANAC58        --------->ANAC58                      ------>ZmHOX2a(2)   <---------ANAC55(2)        --------->ANAC58                     <---------GLK1(1)    <---------ANAC58        --------->ANAC46                    <---------AGP1       --------------->AtSPL3        --------->O2                        <---------ARR14(2) <---------ARR14(2)      <---------ALFIN1                      <---------ARR11(3) ------>MYB83<---------MYB46(3) ------>NtERF2                              <-----------ARR10  --------->ARR14(2) <---------ATERF1(1)   ----------->RAV1(1)  --------->ARR11(3) ------>MYB46(1) -------ATERF1(1)     --------->AtMYB61     --------->ARR14(2)--------->WOX13(1)      --------->ZAT14 ----->DEAR3(1)       <---------ALFIN1     <---------CCA1(2) --------->AtMYB61        <---------ZAT14 ------DEAR3(1)      --------->MYB46(3)  --------->ALFIN1----------->HVH21--------->SPL7      ------>ZmHOX2a(2) ------ETT(2)<---------ANAC46          <---------ANAC46<---------LBD16 <---------ANAC58    --------->ZAT14   cgacgactccacgcgtcgtagtcaccaccagcatcacgttgatgtggatctcgcctcgccggaccaatccgtaccgttcgttctctcgttcactgatctc  4371100                                                                 <-----------HVH21                                                                <---------ANAC46                                                            --------->ZAT2                                                            --------->GLK1(1)                                                            <---------ZAT2                                                            <---------GLK1(1)------>ZmHOX2a(2)                                                            <---------At4g35610                                                            --------->At4g35610                                                        ============================HOX2a_HOX2a                                                        ------>ZmHOX2a(1)    ========================                                                        ===========================HOX2a_HOX2a                                                       <---------LBD16      <---------HSFB2a(1)                                                      ----------->RAV1(2)   --------->HSFB2a(1)                                                      ------>ZmHOX2a(2)     <------ZmHOX2a(2)                                                     <------ZmHOX2a(2)      =========================                                                     --------->GLK1(2)     --------->ARR11(3)                                                    --------->ARR14(2)     --------->ARR14(2)                    <------NtERF2                   <---------ARR14(2)     --------->ARR14(3)                   --------->LBD16                  --------->AGP1----------->RAV1(2)                 <---------LBD16                    <---------ARR11(3)     <-----------ARR10         ---------->DOF2            --------->ANAC58--------->ARR11(3)     <---------ARR14(2)      <-----------HVH21             --------->ANAC58<---------GLK1(2)      <---------ARR14(3) <---------At5g28300<---------MYB52(1)             <---------At4g35610     <---------ARR11(3)   acttacagcgtcaaagttcgccggaagttcacatggagacgcagtgtttcttcagatcctggagctccgtctgaggggatcttctcttccaagacgaaga  4371200  Previous    Next  AGI:  At5g13570.1    Description:  DCP2/TDT (DECAPPING 2); hydrolase/ m7G(5')pppN diphosphatase/ protein homodimerization. similar to unknown [Populus trichocarpa] (GB:ABK93261.1); contains InterPro domain NUDIX hydrolase, core; (InterPro:IPR000086); contains InterPro domain NUDIX; (InterPro:IPR015797); contains InterPro domain Dcp2, box A (InterPro:IPR007722) Range:  from: 4367302    to: 4370268    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g13580.1    Description:  ABC transporter family protein. Identical to White-brown complex homolog protein 6 (WBC6) [Arabidopsis Thaliana] (GB:Q9FNB5); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT2G39350.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G53510.1); similar to ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G55090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18076.1); similar to stigma/style ABC transporter [Nicotiana tabacum] (GB:AAR06252.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41559.1); contains InterPro domain ABC- Range:  from: 4370695    to: 4373204    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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