Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   <-                                                                                              ------>ZmHOX2a(2)                                                                                              -------                                                                                             --------                                                                                             <------ZmHOX2a(2)                                                                                            ---------                                                                                            <--------                                                                         --------->ICU4     <--------                       <---------ALFIN1                              --------->TOE2(3)      ---------                      --------->MYB46(3)                            ----------->GT1         ---------                      <---------ABI4(2)                            <---------TOE1(3)        <--------                 <---------------AtSPL3                   <---------ARR11(3)     --------->At4g35610                 --------->DAG2                          --------->RVE1(1)       <---------At4g35610            <------NtERF2                                --------->CCA1(1)<---------ICU4  -----------            --------->ALFIN1               <---------ATHB12    <----------DOF2   <---------ZAT2    <-          <---------ANAC58 <-----------HVH21      --------->ANAC58 <---------TOE2(3)    =============          <---------ANAC46--------->DREB2C(2)     --------->ANAC58<---------DOF5.7(2)   <------ZmHOX2a(2) -->ICU4  <---------ANAC58--------->DEAR3(1)  ------->TEIL--------->ARR11(3)     --------->ZAT2 -----   tggaaatgtaaggcgtggaaaggtaccaccgtcaagaagagttcaatgaaccaagacaaatatctctttaacgtaaaaatgacagctacgatcagatcct  4337800         ------->MYC3         ------->MYC2         <-------MYC3   --------->ALFIN1 --------->ALFIN1 --------ANAC46 --------ANAC58 ---->RAV1(2) ->GLK1(2) >ARR14(2) -ARR14(2) -ARR11(3) >AGP1  --------->ANAC58  --------->ANAC46 >ARR11(3) --------->ARR14(2)   --------->AHL20(2) -GLK1(2)<-------MYC2     --------->ANAC58 >ARR10 --------->ANAC58  --------->ANAC58 --------ANAC58           --------->ANAC55(1)                                                  <----- ==HOX2a_HOX2a         --------->TOE1(2)                                          ------->TEIL ------ ->ZmHOX2a(1)    --------->AtMYB61                               <---------AHL20(2)            ------   ggcgagtggcacgtttccaccaaaacacacgaaataatatgaagacatatagaaatagatagttcatataatcaaatcagattgaacgtcgcaaaccaaa  4337900                    <---------MYB52(2)                  ------>MYB83                                                     --------->At4g35610                  ------>MYB46(1)                                                  <---------At4g35610                <---------MYB59                                                  --------->ZAT18                --------->MYB46(3)         --------->ATHB12                   <---------ANAC55(1) ---               --------->ANAC46            -------->ATHB1                     <---------YAB1      ---          <---------ICU4                   --------->ATHB51                 <---------ICU4        --- ----CCA1(2) <-----------GT1              <---------YAB1             ----------->GT1              --- >MYB83  <---------YAB1-------->P --------->DAG2               ---------->DOF2<---------ANAC46    <-- >MYB46(1)<--------HAHB4         ---------->DOF2        <---------ICU4     --------->ICU4         ---   tctcaagttgtattattacccaacttaccaaaaaaaaaagcagtattattgcccatactaatttctaaagcatgttaattatgtgtgctaacttcgattc  4338000          <-----------GT1                                                                  <---------AHL20(2)     <------MYB46(1)                                                                       <---------AHL20(1)     <------MYB83                                                                          --------->AHL20(1)    --------->MYB59                                                                       --------->YAB1    <---------TOE2(3)                                                                     --------->AHL20(2) ------>ANAC58                                         --------->bZIP60(2)          --------->LBD16-- ------>ANAC58  --------->TOE2(3)                 --------->ANAC58                  ------>ZmHOX2a(1) ------>ANAC46  <----------DOF2                   --------->ANAC58                <---------LBD16  -- ------>ANAC55(1)                           <-------MYC3  <---------ALFIN1   <---------AHL20(2)    -- -------ANAC55(2)                           ------->MYC3----------->RAV1(1)<---------AHL20(2)    ---- ------>ANAC55(2)  --------->YAB1    --------->TOE2(3) --------->ANAC46------>ZmHOX2a(1)  <---------AHL20(2)   acgtattaggtttttcttctttaatattccatgtttttttcttaaacgtggtatgccacaacacttgcacttcctatatttttttcctgaaattatattc  4338100                                                                                       <---------AHL20(2)                                                                                       <---------AHL20(1)                                                                                       --------->AHL20(2)                                                                                    <---------ICU4                                                                                    <--------HAHB4                                                                                    --------->ATHB51                                                                                    -------->HAHB4                                                                                    --------->YAB1                                                                                   --------->ICU4                                    <------ZmHOX2a(2)                              --------->AHL20(2)        <------ZmHOX2a(1)          --------->ARR14(2)                              <---------YAB1        ===================================HOX2a_HOX2a                             <---------ATHB51     <-----------RAV1(2)   <---------WOX13(1) --------->ANAC58                   --------->YAB1   <-----------HVH21      <------------CBF    --------->ANAC58                 <---------YAB1   <---- ------->ANAC58          --------->ATHB12     <---------ALFIN1            ----------->GT1     ------- ------->ANAC46         <---------YAB1 ---------->DOF2       <---------ICU4<-------GAMYB      <------ ------->ANAC58 <----------DOF2  --------->ANAC58           <---------ATHB12<---------YAB1   -------- ------>DOF2--------->GLK1(1)    --------->ANAC58         *TSS         ------>NtERF2<--------ATHB1   aaagccatcaggagaattctttggttttgattggcacgatccaaagacacacattttgtcaaatcattttcgacgactgttattaataattaattcgtta  4338200               --------->At4g35610                                    --------->HSFC1(2)             <---------ZAT18                                          <---------HSFC1(2)             <---------WRKY38(1)                                    <------NtERF2             <---------WRKY12                                      ----------->RAV1(1)            <<<<<<<<<<WRKY11                                       ------>NtERF2        <---------MYB52(1)                                        --------->DEAR3(1)    ------->TEIL                 <-----------GT1                  <---------ETT(2)   <---------ALFIN1           <---------ICU4           <---------YAB1<---------ALFIN1  <---------SPL7        <---------ANAC46     ------>ZmHOX2a(2)   --------->RAP2.3(1) --------->ANAC58   --------->At4g35610     --------->GLK1(1)   --------->LBD16 --------->ANAC58   <---------At4g35610=============HOX2a_HOX2a <---------ATERF1(1) -----DOF5.7(2)<---------At4g35610     ------>ZmHOX2a(1)        ------>NtERF2   <---------ANAC58 -->DOF5.7(2)<---------WRKY45<---------AHL20(2)     <---------YAB1----------->HVH21 ---MYB52(1)<<<<<<<<<<WRKY6  --------->ICU4 <------ZmHOX2a(2) <---------LBD16   <---------ANAC58 ->TOE2(3)--------->MYB52(2) --------->AHL20(2) <----------DOF2<---------DEAR3(1)             <------ZmHOX2a(1)   atgacgcaccgttagtcaactccgcttcgtattaattactcctccgatctctttcttattcttctccggcgacacttcccttgcttctccctcttaggac  4338300                                                                                                   <-                                             --------->ARR14(1)                               <------                                             --------->CCA1(2)                                <------                                            <---------ARR14(2)                          <----------DOF2                                 <---------ALFIN1                  <---------ARR14(2)  ------>ZmHOX2a(2)                                 ----------->RAV1(1)       --------------->AtSPL8     <---------RVE1(1)                                --------->ANAC46           <---------------AtSPL8     <------ZmHOX2a(2)                              --------->ANAC46           <---------ICU4              --------->ARR11(3)                              --------->bZIP60(1)       --------->ICU4               --------->ARR14(2)                --------->At4g35610         <---------GLK1(2)  <---------TOE1(2)     <---------AGP1--                <---------At4g35610<---------ALFIN1  <---------YAB1--------->ARR14(2)--------->AGP1--        <---------ARR14(2)    --------->ANAC58     <---------At4g35610               <---------ARR11(3)        --------->GLK1(2)     --------->ANAC58<-------TEIL <---------------AtSPL3    <---------ARR14(2)        --------->ARR14(2)   --------->SPL7 --------->ARR11(1) ------->TEIL         <---------CCA1(2)        ------->TEIL        <-----------GT1 --------->ARR14(2)<-----------GT1   <-----------HVH21 <--     --------->ANAC46  <---------GLK1(2) --------->LBD16<---------YAB1 <---------At4g35610 <---------   tctctctacgaatctgtaagcttcaaattcttacgccacactccgagattcgcttctgattattgtacgtttctgcttcttccttcagatcttttacttt  4338400   --------->GLK1(1)   <---------GLK1(1) --------HSFB2a(2) ---DAG2 ----DOF2                        --------->ZAT18                     --------->AHL20(2) ------->HSFB2a(2)    ------>ZmHOX2a(2)                   <----------DOF2                           < ------->HSFC1(1)<---------WOX13(1)            ------->TEIL <-----------GT1                      ---- -------LBD16 <---------YAB1     <---------ZAT18   <---------LBD16   <---------AHL20(2)          <--- --GT1   <---------ALFIN1  --------->ATHB12 <---------YAB1<---------DAG2             --------->ZAT6 <   tctggaattccacactctaattgatctattcattgtgcccaaaattatgcatctctggagctttacccgattttaatcgttgaattctcactaagtcgag  4338500                                                                               --------->At4g35610                                                                              <---------ALFIN1                                                                             --------->MYB46(3)                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           --------->ARR14(2)     --- ----------DOF2                                                            <---------ARR14(2)     <-- ----->ARR11(3)                                                   --------->At4g35610          <----- ------ARR11(3)                                                   <---------At4g35610         <------ ---------DAG2--------->ZAT14          <---------YAB1     ------->TEIL  <---------TOE1(2)------->TEIL   acctttttgatggctgtgttctcaatttgtcaacttgcatcatttttgtttacaggtatgaatttttgagctccaaggatccactgccatgtatttatgc  4338600                                                                                            <--------                                           <----------DOF2                         --------->ANAC58 ---------->DOF2                      <----------DOF2                              --------->ANAC58 ------>At4g35610                  --------->ARR11(3)  <---------ANAC58           --------->DAG2<---- -------At4g35610                  <---------ARR11(3)  <---------ANAC58          ---------->DOF2<---- ----At4g35610             <---------YAB1 <---------ANAC58         <---------KAN4(2)    <-----------RAV1(2) -----RAV1(1)            --------->YAB1   <---------ANAC58--------->ATHB12    <----------ID1<--------   tgctaaagcttgaaggcagtagtggaatcaccattaagttctttgctttgtaatttagcttgatttgagaataaacaaatgggaaaagcatcaggcttgc  4338700  Previous    Next  AGI:  At5g13500.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25265.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42819.1) Range:  from: 4338158    to: 4341006    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version