Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->YAB1                                              <---------YAB1                                             --------->ARR11(3)                                            <---------GLK1(1)       --------->MYB46(3)                   --------->GLK1(1)      ------>MYB46(1)                      <---------ARR11(3)      ------>MYB83                     <---------At4g35610--------->HSFB2a(2)     --------->MYB52(1)                --------->At4g35610<---------HSFB2a(2)     ----------->RAV1(1)           <---------SPL7        <---------TOE1(1)    --------->AtMYB61             <---------ANAC46       <---------TOE2(1)   --------->MYB46(3)           <---------ANAC46      <---------SPL7 ------->MYB46(3)        <---------ANAC58  <---------ARR14(2) <---------ARR14(2)                  <-- -->LBD16                <---------ANAC58  --------->ARR14(2) --------->GLK1(2)                   --- ->LBD16   <---------DAG2<---------ANAC46  --------->ARR11(3) --------->ARR14(2)              ------- -HSFB2a(2)<----------DOF2     <---------DEAR3(1)<---------YAB1                               <------   aacaaaccaacagctttatccaaaattccttgttcggcgtaagcagatatcatcgttgtacgagaaactgcatttaactcagacatttcatcgaacagct  4248800                    <---------ALFIN1                  ------>NtERF2            --------->ANAC58            --------->ANAC58                                           <---------HSFB2a(2)     <---------At4g35610  --------->ZAT6                           --------->ARR14(2)    ------->TEIL ----------->HVH21                                 <---------GLK1(2)         ------>ZmHOX2a(2) -------ARR14(2) --------->ANAC46                                  <---------ARR14(2)       <------ZmHOX2a(2) ------>ARR14(2) <---------ETT(1)                                 ==================================HOX2a_HOX2a -->At4g35610<---------ZAT2                                       <------ZmHOX2a(1) --------->LBD16 ---At4g35610--------->ZAT2              --------->ZAT18          =================================HOX2a_HOX2a   tatctgcatcttccaagctccgacactcacagtacatttgaagcacacagttctgaagaagcacagaaggattctcgatacccatccgcatgcgatcgtg  4248900                                                                                    <---------DAG2                                                                                    --------->TOE2(3)                                                                                  ------>MYB83                                    --------->ANAC46                              ------>MYB46(1)                                    --------->ANAC58                    ------->GAMYB                      --------->TOE2(3)                              --------->MYB52(1)                    <---------ARR11(3)         <<<<<<<<<<<<<<<<<LFY  <---------DOF5.7(2)                ---------->DOF2     --------->ANAC58                ----------->HVH21            ----              XXXXXXXXXXXXXXXXXXXX>MIR852 ---------->DOF2          <---------MYB52(2)          <----- <---------GLK1(2)  --------->ARR11(3) --------->TOE2(3)          --------->At4g35610          <-----   caagagtctcccatgagataaagacctcaattctctgcaagcctcaaagagacattggtaagaatacgagctaacggagacaccagccttatccatttct  4249000                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                        <---------ARR14(2)                                                      ----------->ARR10                                                      <---------YAB1                                                   <---------ATHB12                          --------                                                 ------>MYB83                            <-----------GT1                                                 ------>MYB46(1)                    <---------ARR11(3)                                          ------->GAMYB --------->ARR14(2)          --------->ARR11(3)                            ------>ZmHOX2a(1) ----------------->AGL3      <---------ANAC58  =========                      --------->At4g35610--------->ANAC58              ------>ZmHOX2a(1)<-----------GT1 ----->AtLEC2         <---------At4g35610--------->ANAC46--------->ARR14(1)        <XXXXXXXXXXXXXXXXX ----ANAC58       <---------MYB52(1)     --------->ANAC58--------->GLK1(2)<---------ANAC58  ------->GAMYB ----ANAC58     <---------ANAC46    --------->HSFB2a(2) <---------GLK1(2) <---------ANAC46 --------->MYB46(3)   tgcaaaaactcaaatgcttcgttgagcttcctatgcttcgacaacgaaaccaaatgaagattctctacttgtccttgcttatgcgagattttaacagacg  4249100                               --------->ANAC58                            <---------O2                            --------->ANAC46                            --------->TGA1a                             <---------HSFB2a(2)                            --------->O2                            --------->GLK1(1)                            ----------->HVH21                      --------->ARR14(2)                            =======================================bZIP_DOF                            <---------TGA1a                        <---------ARR14(2)                         --------->TOE1(2)                       --------->LBD16               ------       --------->ZAT18   --------->TOE2(2)                     <---------LBD16                 <----- ->MYB52(1)           --------->GLK1(1)   ------>ZmHOX2a(2)  <-----------GT1   --------->At4g35610 =====================================MYC_MYB --------->ARR14(2)--------->ANAC46             -------- XXXXMIR4221   <---------ZAT14 --------->ANAC58         <----------DOF2 --------->HSFB2a(2)  <-------   gagaagaagtgctcgacttcagagaaacccacgacggaatttgatcgaaattcgcgttctttataaccggaactcgagaagagctaaacgaagactgtac  4249200                                                                  ----------->RAV1(1)                                                                 ----------->HVH21                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                 --------->ANAC58                                                               --------->MYB52(1)                                                        --------->HSFC1(1)                                                        <---------HSFB2a(2)                                                        <---------HSFC1(1)       <-----------TGA1                                 --------->HSFB2a(2)      --------->YAB1                                <----------DOF2       ----------->GT1    <---------ARR14(2)                            ===================================================    --------->ARR14(2)                            --------------->AGL15   --------->ANAC58    --------->GLK1(2)                             <---------------AGL15   --------->ANAC58        <-- --->ZAT14                                       ----------------->AGL1 ---------->DOF2           <-- ----ZAT14                                   <----------DOF2 --------->MYB46(3)            <---------ZAT14 ->ZAT14                         ---------->DOF2---------->ID1--------->TOE1(2)            --------->ZAT14 --ZAT14<---------YAB1    --------->GLK1(2)  <---------DAG2  <---------MYB52(2)           <----------DOF2   agtgagaatcgtcatagttgatggagaaattctacaaaagtttagagcttttccctttcgagaacaaacgacagagaagcaaaaaactcagactttactg  4249300                            --------->MYB52(1)                         --------->AtMYB61                         ------->GAMYB                        --------->MYB46(3)                        ----------------->AG                       --------->ANAC58                <------MYB83                     <---------MYB111(1)               <------MYB46(1)                     --------->MYB46(3)               --------->MYB111(2)                           <               --------->ANAC46                       --------->MYB111(1)                           <             --------->MYB46(3)                       <---------MYB46(3)                            -          <----------ID1----------------->AGL1        --------->MYB46(2)                            <      <------------CBF --------->ANAC58              <---------MYB55(1)                             -     --------->ATHB12<---------MYB55(2)              <--------P                          --------->LBD16     <---------ICU4  <---------MYB111(2)           <---------MYB46(3)               --------->GLK1(1)    <---------MYB52(1)------->GAMYB           ------------>CBF  --------->ANAC46    <---------GLK1(1) =========================================MADS_MADS--------->ATHB12            --------->ZAT14      < -------ANAC58 --------->ANAC58          --------->YAB1----------->GT1         <---------ZAT14 ------ -------ANAC58 --------->ANAC58 ----------->GT1   <---------ATHB12         <---------------AtSPL8   -   gcttcagttattgcaacaagccaacaaccaaaacgggtcaaaatcaaaatcaatggttggtaataaacgacagcgttttagtacagagacccgaagagtg  4249400                                                  --------->SPL7          <-----------GT1                        --------->SPL1(1)   <-------TEIL                                  <---------SPL1(1) ------MYB46(1)                                 <---------SPL7 ------MYB83                                   <---------ANAC58 -------->HSFC1(2)                             <---------ANAC58                          --------->AHL20(2) ---------HSFB2a(1)                           --------------->AtSPL3                     --------->YAB1 -------->HSFB2a(1)                           <---------------AtSPL3                    <---------ATHB12 ---------HSFC1(2)  <---------ANAC58          --------------->AtSPL8                <---------ATHB12 --->ALFIN1         <---------ANAC58       --------->ZAT18     ------>ZmHOX2a(1)   ------>MYB83  <<<< ---------->GT1  <----------DOF2         *TSS--------->At4g35610                   ------>MYB46(1)  <   gaaggttcaaagtttccttctttggtgtctctcatcaaatgagagtgagccgtacgatttctctcctcttcttgttttaaaaacctatcaataatattct  4249500                     <------NtERF2                     --------->ATERF1(1)                     <---------At4g35610                    <---------ATERF1(1)                    ------>NtERF2<---------MYB46(3)                              --------->DEAR3(1)                    <---------MYB46(3)                                           <---------ALFIN1                    <<<<<<<<<AtERF-5                                            --------->MYB46(3)                    <---------ERF1<-------GAMYB                                <-----------HVH21                    <---------RAP2.3(1)                                        --------->LBD16                    <<<<<<<<<AtERF-2                                           <---------ATERF1(1)                    <<<<<<<<<AtERF-3                                           ------>NtERF2     ----                    <<<<<<<<<AtERF-4                                          --------->ANAC58   ----                    <<<<<<<<<AtERF-1                                          --------->ANAC46   ----                   <---------DEAR3(1)                                         --------->ANAC58-------                   <---------RAP2.3(2)                                       --------->MYB46(3)<-----                   <---------RAP2.3(3)                            <---------WOX13(1)          -------                   <---------ANAC46                   --------->At4g35610    <---------LBD16  <------         ------>ZmHOX2a(1)       --------->MYB52(2)   <---------At4g35610  -------->P         -------      ------>ZmHOX2a(1)         <-------TEIL         ------->TEIL<---------GLK1(2)------>NtERF2------ <<<<<TBF1         <---------RAP2.6(2)   <---------YAB1 <----------DOF2  <---------MYB111(1) -------- <<<<<<<<TBF1     --------->RAP2.6(3)   <-----------HVH21        --------->ARR14(2)<------NtERF2<----   tcttcttcctcctctcaaatggcggctactagggttcgttgttgtcatagcaatgcagctttcaccagattgccacttacccgccaccgaaactcgccga  4249600                                                                                                   --                                                                                                   --      --------->GLK1(1)                                                                            <- ----->ANAC58                                                                                      <- ----->ANAC46                                                                                      <- ----->ANAC58                                                                                     --- ---->HVH21                                     <--------HAHB4                                 ------ ----ATERF1(1)                                  <---------ICU4                               <------- -->DEAR3(1)                                    --------->YAB1                               ======== ---DEAR3(1)                                   <---------YAB1                               <-------TEIL -->At1g77200                   --------->SPL7<-----------GT1                          ============== >NtERF2                 <---------GLK1(1)   --------->YAB1            ------>ZmHOX2a(1)<---------TOE1(3) ->DEAR3(2)      <---------ANAC58           --------->ICU4          <---------ATERF1(1)<------------- --NtERF2        <---------ANAC58 --------->At4g35610 --------------->AGL15            <-----------RAV1(2)   cgctaccgatttctctaaatcgtgtcgatttccctacgctgaagaaattatcattacccattggagatggctcctccattagaaaggtttcaggttcagg  4249700  Previous    Next  AGI:  At5g13270.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to EMB2261 (EMBRYO DEFECTIVE 2261) [Arabidopsis thaliana] (TAIR:AT3G49170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69881.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68678.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 4246957    to: 4249215    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g13280.1    Description:  AK-LYS1 (ASPARTATE KINASE 1). Identical to Aspartokinase 1, chloroplast precursor (AK1) [Arabidopsis Thaliana] (GB:Q9LYU8;GB:O23152); similar to CARAB-AK-LYS (Lysine-sensitive aspartate kinase), amino acid binding / aspartate kinase [Arabidopsis thaliana] (TAIR:AT5G14060.1); similar to CARAB-AK-LYS (Lysine-sensitive aspartate kinase), amino acid binding / aspartate kinase [Arabidopsis thaliana] (TAIR:AT5G14060.2); similar to aspartate kinase, lysine-sensitive, putative [Arabidopsis thaliana] (TAIR:AT3G02020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49092.1); similar to putative aspartate kinase [Oryza sativa (japonica cu Range:  from: 4249441    to: 4252839    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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