Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                 <---                                                                                                <----             --------->CCA1(2)      <---------AHL20(2)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            --------->ARR14(2)     --------->AHL20(2)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <---------ARR14(2)     <---------AHL20(2)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     ----------->HVH21           ----------->GT1 ----------GT1                --------->At5g28300          <---------ANAC58             --------->DAG2 ------AHL20(2)        <---------CCA1(2)       <---------ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <---------ANAC58     --------->MYB46(3)<-- -ARR11(3)XXXXXXXXXXXXXXXXXXXX>MIR861-3P       <---------ANAC58  ------>ZmHOX2a(2)    ---------->DOF2   ttaactactctacagatatgtcttcaaatctcggtaattttatggtctctcgtgctcgagttcgtgatcgggctatgcatcaacaattgaaaggtgattt  4166200                                                                                 ----------->GT1                                                                          <---------ANAC46                                                                          <---------ANAC58                                                         <---------GLK1(2)<---------ANAC58                                                         <---------ARR14(2)    <---------TOE1(2)                                                 <---------YAB1     <-------TEIL<------MYB83 ---MYB46(1)            <---------ANAC46    <---------ICU4        --------->YAB1<------MYB46(1) ---MYB83             <------MYB46(1)  <---------MYB111(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -----AtMYB61         <------MYB83   --------->MYB52(1)  --------->ARR14(2)   <--------P -----GAMYB  --------->ZAT6        <---------MYB52(2)  <---------YAB1<---------ICU4   ggttgagcatatataacacaaatttggtgggaatcaaactaactactaattgttattccgattctcaatattcatttcttgtaggtttaaaattttagta  4166300                 <---------AHL20(2)                --------->AHL20(2)            --------->AHL20(2)            <---------AHL20(2)            <---------AHL20(1)           --------->AHL20(2)           <---------AHL20(2)          <---------YAB1        <---------ICU4        <---------AHL20(2)        <--------HAHB4        --------->ATHB51        -------->HAHB4        --------->YAB1                                 <---------AHL20(1)        -------->ATHB1                              --------->YAB1       <---------ATHB51                          --------->YAB1       --------->ICU4                          <---------AHL20(2)       <---------YAB1                          --------->AHL20(2)     <---------ICU4                 <---------YAB1  --------->AHL20(2)     --------->YAB1                 <---------AHL20(2) --------->AHL20(1)    --------->AHL20(2)            --------->YAB1<---------YAB1      --------->ANAC46    --------->ICU4   --------->AHL20(2)   <---------YAB1           --------->YAB1    <---------AHL20(2)<---------AHL20(2) <-----------GT1     <-----------GT1      <---------ICU4   tttgtattaattattaaattttataaaatagaatatttataattttcattttaataatattttttactataagaaactcactaaaaatttctaccattaa  4166400                         --------->RVE1(1)                        ----------->GT1                        --------->GLK1(2)                        ----------->GT1                        --------->ARR11(3)                   --------->AHL20(1)                        <---------ARR11(3)                   --------->AHL20(2)                    <-                       <---------GLK1(2)                     <---------AHL20(2)                 <----                   ------>MYB46(1)                          --------->AHL20(2)               <-------                   ------>MYB83                         --------->AHL20(2)              <-----------GT1 --------->ANAC58 ----------->RAV1(1)    --------->TOE2(3)  <---------AHL20(2)   ---------->DOF2<---- --------->ANAC58--------->AtMYB61    <---------CCA1(2) <---------AHL20(2)      <---------AHL20(2)<--   accaagaaaaattaagagaccaacaaaatctcttaaattcaaatctcaaattttaaaattaaaaaaattggaaaaaacctattaaaagtttaaccattag  4166500                                                  --------->At4g35610                                                  <---------At4g35610                                                  <---------ZAT2                                              <------NtERF2                                             <------NtERF2                                             --------->LBD16                                             <---------HSFB2a(2)                                            <---------ANAC46                                            <---------LBD16                                           --------->ATERF1(1)                                           <---------LBD16                                           <------NtERF2                                          ------>NtERF2                                         <---------PCF2                                    <------------CBF                                 <----------DOF2                                --------->ANAC55(2)                                  <---------DAG2      --------->YAB1            --------->ANAC58  --------->ZAT2              <---------ALFIN1 -------P                       --------->ANAC58 --------->GLK1(2)           <------NtERF2<---------HSFB2a(2) -----TOE1(3)                   ----------------->AGL1                      ------>NtERF2 --------->HSFB2a(2) --MYB52(1)                     <---------ANAC55(2)  <---------SPL7        --------->ANAC58 -----TOE2(3)        <---------ANAC58    --------->TCP20                   --------->ANAC46 -----GAMYB          <---------ANAC58 --------->ALFIN1   ----------->GT1   --------->ANAC58  --------   ggttgctctaataacacagatgggcctgtgagttacgaaattggggccgggaagctggacggttttatttgtaagtcgcgccactcacttttctataaag  4166600                                        <---------O2                                        --------->O2                                        <---------TGA1a                                        --------->TGA1a                                        --------->ANAC46                                        --------->ANAC58                                        --------->ANAC58                                        <---------ANAC55(2)                               <---------ANAC46                               <---------ANAC58                           <---------ANAC58                                             --------->HSFC1(2)                           <---------ANAC46                         <---------ZAT2      <---------HSFB2a(1)    --------->ZAT6         <---------ANAC58                         <---------At4g35610 <---------HSFC1(2) --------->PCF2          *TSS  <---------ANAC58      ------>ZmHOX2a(1) --------->At4g35610 -->DOF2         --------->GLK1(2)      --------->ANAC55(2) <---------ALFIN1            --------->HSFB2a(1)   acgctcccactacttgaagagtctgtgtgtcgtgcgtgtctcacgtctctctctcctctctcccacttcaagctgcttcaaaaccctagaagcttctact  4166700                                                              ------->TEIL                                                              <---------ARR11(1)                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                              --------->GLK1(2)       <---------ARR14(2)                                    <---------ARR14(1)       <---------GLK1(2)                                     <---------GLK1(2)--------->TOE1(3)       --------->ARR14(2)                  <---------ZAT6   <------NtERF2    --------->ZAT6    --------->ANAC46                   <---------MYB52(1) <-----------------AGL1    --------->ANAC58             --------->MYB46(3)       <-----------------AGL2   --------->ARR14(2)    --------->ANAC58           <-----------GT1            ----------------->AGL1 ---------->DOF2    -   <---------LBD16            ---------->DOF2             ----------------->AG--------->TOE2(3)<-----  ------->GAMYB              <---------ATHB12  ------>ZmHOX2a(2)            -------->P  <---------ALFIN1 --------->MYB46(3)<---------ATHB12  <---------ZAT6  <---------O2   --------------->AtSPL3    <------   gcaaccacggattcttctcaaatcaagtccaataaaccactgttagtgatcggagacatggccgaatctggcagtactaaccctaaatccccatccgttg  4166800                                                                   <---------ANAC58                                                                 --------->ARR11(3)   <---------ARR14(2)                                            <-----------GT1   --------->ARR14(2)                                  --------->ICU4 --------->LBD16               --------->CCA1(2)       <---------YAB1    --------->WOX13(1) -------->HSFB2a(2)   <---------ZAT14            <---------DEAR3(1)<---------ANAC58 ----MYB46(3)    <---------ZAT14              --------->ANAC46--------->YAB1  --------->ANAC58 ---MYB52(1)     --------->ZAT14            --------->YAB1   <---------YAB1   --------->ANAC58      -   ttcccgattcgactctcggtggactgaagagagatttaagaaactatcacgacggtgatgattctaataacttgtctatcaagaaatcgaagaccacgaa  4166900                                                                 --------->ANAC58                                                                 --------->ANAC58                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                            ----------->HVH21                     <--                                                            --------->LBD16                   <------                                                          <------NtERF2                       <------              --------->HSFB2a(2)                        --------->MYB52(1)                   -------              <---------HSFB2a(2)                  <---------ANAC58                           -------             <---------ETT(2)                      <---------ANAC58                        ----------          ------->GAMYB               --------->ZAT6     ------>NtERF2                  --------->HSFB2a(2)         <------------AtMYB77       <-----------GT1------>ZmHOX2a(2) ---------->DOF2    <---------HSFB2a(2)       --------->MYB52(1)  --------------------->WRI1   <---------ALFIN1         <-----------------AG ---------->GT1            <----------DOF2     --------->ETT(2)<---------ALFIN1  ====================   gatggagaataactgtcgagaaatcgttcctttggatgtaacaccattgtcgatcgtgccaccggacactccaaagctctctagacagttttggaaagct  4167000                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)            --------->At4g35610                                               <---------ANAC58            --------->ZAT2                                                    <---------ANAC58     --------->ICU4                                                       ------>ZmHOX2a(2)     <---------YAB1                                                      <------ZmHOX2a(2)   --------->YAB1            <---------YAB1                             <---------ARR11(3)  --------->ICU4            <----------DOF2 <---------ANAC55(2)         --------->ARR14(2) ----NtERF2 <---------At4g35610             --------->ANAC55(2)         <-----------ARR10 ---ZAT2    <---------ZAT2<---------------AGL15                         --------->ARR11(3) ---At4g35610     ----------->RAV1(2) <---------WOX13(1)                --------->AGP1 -->At4g35610    ------>NtERF2   --------->YAB1                         <---------ARR14(2) -->ZAT2   ------->TEIL------->TEIL<---------YAB1 ------>ZmHOX2a(2)     <---------AGP1 >DOF2  <---------REM1(1) --------------->AGL15 <---------ARR11(3)     <---------CCA1(2)     -------- =========================================MADS_MADS         ----------->GT1<----------DOF2   --------   ggcgatgatgatgaagctgcgcctgtacctctttattgtaattgacacttgatctcaacctattgtgaatttcagatctttcttgggattcgaaacccta  4167100  Previous    Next  AGI:  At5g13130.1    Description:  ATP binding. similar to ATP-binding region, ATPase-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G24970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68333.1); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594) Range:  from: 4166625    to: 4170520    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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