Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------MYB46(3)                                                                                      <---------TOE2(3)                      --------->ANAC55(2)                                         --------->ARR11(3)                      --------->ANAC46                                            <---------ARR11(3)                 <-------TEIL                                                     <---------GLK1(2)              <---------At4g35610                                               ----------->ARR10              --------->At4g35610                                           <---------ANAC55(1)          <-----------HVH21                                                 --------->ANAC55(2)         --------->ANAC46                                                   <---------ANAC58        --------->MYB46(3)                                                  <---------ANAC58      ------->TEIL    --------->ANAC58                ---------->DOF2       <---------ANAC46     <-----------GT1  --------->ANAC58             <---------ARR11(3)       <---------ANAC55(2)------  --------------->AtSPL8                           --------->ARR11(3)  <---------MYB46(3)      ------  <---------------AtSPL8 <-----------GT1<-------TEIL<------ZmHOX2a(2)  --------->MYB111(1)<----------   agtttttgtacccatcagatgcataagtaactaaacaaaacatacataaataagatcaaagagatagaaatagtagttgcgtaagattttggttaccttc  3639500                        <---------YAB1                                   <---------TOE2(3)       <--- >MYB83               --------->YAB1 ----------->HVH21       --------------->AGL15          ------>NtERF2 >MYB46(1)          --------->ARR11(3)                    --------->ARR14(2)            <---------REM1(1) -GT1               <---------ARR11(3)                    <---------ARR14(2)        <---------WOX13(1)   cagtcttgtagagtctgcgaattatcttgataacattccatgacagaaacagtgattccagttcttgatggagcaaaggttgtctcattgatgcagcctt  3639600         <---------HSFB2a(2)         --------->HSFB2a(2)    <---------KAN4(1)          <----------DOF2    <---------HSFB2a(1)       <---------DAG2                       <---------ANAC58    <---------HSFC1(2)     <-----------GT1                         --------------------->WRI1    --------->KAN4(1)   <--------HAHB4                         ---------->ID1       <---------ARR14(2)    --------->HSFC1(2)  <---------ICU4                       <-----------RAV1(1)    --------->GLK1(2)    --------->HSFB2a(1) --------->YAB1                ------->TEIL <---------ANAC58 <-----------ARR10   <---------KAN4(2)   <---------YAB1                <---------GLK1(2) <-----------------AGL1 ------ANAC46        --------->YAB1          ------->TEIL  <----------DOF2   --------->RAP2.6(3)    <   cgtagaatgttcgagtaaacccattatcattaccttttatgaccatgtattttctgaatctctttgttgccttgttcaattcggcaaatctaaactcttt  3639700                                                       <---------AHL20(2)                                                      --------->AHL20(2)                                                     <---------YAB1                                                  <---------AHL20(2)                                                  --------->ICU4                                                  <---------YAB1                                                <---------RVE1(1)                                                <---------CCA1(1)                                               <---------AHL20(1)                                               <---------ARR11(3)                     <---------DAG2            --------->ARR11(3)                                   -                     <----------DOF2           --------->AHL20(1)               <-------TEIL     <---               <---------TCP16(1)     <---------ANAC55(2)                       --------->ZAT18 -----               <---------TCP20 --------->YAB1<---------YAB1                     <---------ZAT18 -----       <----------DOF2   <-----------GT1     <---------TOE2(3)             ---------->DOF2      <---- ---------GLK1(2) <---------ALFIN1    --------->ANAC55(2)           ---------->DOF2      --------->MYB52(1)   caaattctcctttactggctccactttttacatttataagacgtattaagatattattatatatgtaaacaaaagtagaaagtgcatttgaaaacggaga  3639800  --------->TOE1(3)        <---------ANAC46      <---------MYB46(3)                             <---- ----------->RAV1(2)       <---------ANAC58     <--------P                                      ----- ------>TEIL     <---------AtMYB61             <-------GAMYB                                  ------- ------REM1(1)   --------->ALFIN1    --------->At4g35610                                     -------- ---------->AtSPL8         <---------ANAC58 <------ZmHOX2a(1)                              ---------- ---------->AtSPL3<------MYB46(1)    <---------At4g35610        <----------DOF2         --------->YAB1 -----------AtSPL3<------MYB83      --------->GLK1(2) <----------DOF2                  <---------YAB1   tgtacctgaacttgaagggatggtgagaggcttgggagaagctgaaggaggttgttctttgagaggctttagacagtttcccattgttgatcataaagat  3639900                                          <------MYB83                                         <---------TOE1(2)                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  --------->ARR14(2)                                                <                                  --------->AGP1                                                  <--                                  <---------ARR14(2)                                              <--                           <---------AHL20(2)                                                   <----                   <-----------TBP--------->ARR11(3)                                            ----- -----YAB1         --------->AHL20(2)   <--------P                                           -------- ------>GT1   <---------YAB1      <---------ARR11(3)             --------->ATHB12          ---------- -->YAB1  <---------GLK1(2)--------->AHL20(2)          ----------->GT1             <---------HSFC1(2) ->ICU4   <---------ARR11(3)      <---------AGP1      <---------TOE2(3)      ---------->DOF2 <------- >DOF2    --------->ARR11(3)<---------YAB1<------MYB46(1)       --------->ICU4     --------->HSFC1(2)   gataaatctgtagattttgatttttatattttaatagatcttgtaggtttttttatgaggttgaaaatgatttaagtgtgaaagaagcttcaaaaaaggt  3640000 ---------At4g35610 ----MYB83                                              --------->GLK1(2) ----MYB46(1)                                           --------->ARR14(2) ----P                    --------->DAG2           ---------->DOF2                            <------ ---->ALFIN1             ---------->DOF2      --------->ANAC58                                ------- ->DAG2             <----------DOF2           --------->ANAC58                    ------------>CBF >DOF2           <---------ALFIN1           ---------->DOF2         <-----------GT1           ------- --TOE2(3) --------->GLK1(1)              --------->YAB1<---------ARR14(2) <-----------GT1  ---------   tgggctgtctcagaattcaacactttaaaaagtcaagttcacattcaaaagccaaaagaatccacagtatttactatttactatgccaatgtctatataa  3640100                                           ----------->GT1                                         <---------ANAC58                                         <---------ANAC58                                   ------->TEIL                              --------->YAB1                                              <<<<<<<<<EIN3 ---AHL20(2)               <---------HSFC1(1)                                            ----------->GT1 ---->TBP                  --------->HSFB2a(2)                  --------------->AGL15<-------TEIL -->AHL20(2)               --------->HSFC1(1)          --------->GLK1(2)             ------------>CBF -->TBP----------->GT1     <---------HSFB2a(2)        <---------GLK1(2)           --------->CCA1(2)--   atgcttataaggcaaaatttagaaacattctagaataaacagggcttgaaaaattagattcttgttctctgtttggaacagaagagatgcaatgtatata  3640200          <---------ICU4         <---------YAB1         --------->ICU4                                                                     ---------       --------->YAB1             <---------ZAT14                                      ---------->DOF2 ----------->GT1          --------->AtLEC2                                         ------->GAMYB -------->DOF2          --------->YAB1          --------->YAB1                  ----------->RAV1(1)   agaaagtaaacataattagattagaatcatgcagactaaacagcctgaaatcagaaaatagaacaacaagtagtgtctcagacaacagcgaaagagatgg  3640300                   <------MYB46(1)               <---------ANAC55(2)                   <------MYB83                  --------->ANAC46                   <---------MYB46(3)            --------->ANAC55(2)                        <------MYB83                   <---------DEAR3(2)      <---------MYB46(3)                  --------->TOE2(3)  <--                  --------->MYB59          <---------DEAR3(2)                  --------->TOE1(3)  ---                  <---------AtMYB61        <------MYB83                        --------->YAB1   <----                 <--------P                <------MYB46(1)                  --------->YAB1  <------MYB46(1)               <---------ZAT2             --------->MYB59                  <---------ATHB12--------->MYB59             <-----------RAV1(2)          <---------AtMYB61         --------->ALFIN1    --------->ALFIN1          --------->ANAC58               <--------P               <---------ANAC46    <---------ANAC46        ---------->DOF2              <-----------RAV1(2)          <---------ANAC58    --------->ALFIN1 >CCA1(2) --------->ANAC58        <------ZmHOX2a(1)               <---------ANAC58 --------->DAG2----   ctcataagtcaaaagccaggttggttcaagtagtaaggaccaggttggttcacgtagtaagggccatggggtgtccaataaccataaggtgtgtaggtat  3640400  Previous    Next  AGI:  At5g11410.1    Description:  protein kinase family protein. similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G11400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66239.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 3638432    to: 3639884    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g11412.1    Description:  nucleic acid binding / nucleotide binding. similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT5G53680.1); similar to unknown [Populus trichocarpa] (GB:ABK93394.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 3640027    to: 3640877    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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