Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ANAC58                                       <---------ANAC58                                       <---------ANAC55(2)                          --------->ANAC55(2)            --------->ANAC58           --------->ANAC55(2)            --------->ANAC58      <---------ICU4 --------->ANAC46         <------MYB83 ----------->GT1                                 --------->ZAT18 -------ZAT14             <------MYB46(1)                          ------>MYB46(1)     <---------ZAT14 ------>ZAT14             <---------ANAC55(2)                      ------>MYB83     <---------ANAC46 ------>ZAT18            --------->MYB59    --------->ICU4  <---------ANAC58        <---------ANAC58 -------ZAT18         --------->CCA1(2)<---------ANAC46     <---------ANAC58        <---------ANAC58 -----TEIL  --------->ANAC46     <---------YAB1         <----------DOF2       ---------->DOF2 -------   tacacaagactaacaaggaataagagataggtatcaatattgcgtaaaaatgaacagactttgcttaccatccagtcttgtaaagagcgtgaactatcac  3637700                             <---------At4g35610                             <---------ZAT2                        --------->ARR14(2)                        <---------ARR14(2)                                  --------->HSFB2a(1)                      --------->LBD16                                       <---------HSFB2a(1)                  --------->GLK1(2)                                         <---------HSFC1(2)                  <---------ARR14(2)                                        --------->HSFC1(2)   ----------->HVH21<---------LBD16                                    --------->HSFB2a(2) -->YAB1          --------->ARR14(2)             ----------->GT1      --------->REM1(2)        ------   attccatgacagaaacagcgattccggttccagctcttgatggtgcaaatgtggtttcatctatgtagcccttgtagaattttcgaacagagtaatcctc  3637800                                                    <---------ARR14(2)                                                    <---------ARR11(1)                                                    <-----------ARR10                                                    --------->GLK1(2)                                                    --------->ARR14(2)             <---------TCP16(1)                                                    ------->TEIL                   <---------TCP20              <---------ANAC58      <----------DOF2<---------CCA1(2)<---------GLK1(2)               <     --------->ANAC46           ---------->ID1  --------->LBD16     --------->ARR14(2)   <----------DOF2   <-----------GT1          <----------DOF2   <---------LBD16       <---------ARR14(2)   <---------DAG2 >ZmHOX2a(1)  <---------ANAC58<-----------RAV1(1)  <---------ARR14(1)--------->GLK1(2)<---------ALFIN1   gcattctacgaccctgtcttgtctgaatttctttgtcgctttcttcaatccgcgaatctgaagactctcagattctcgttttctggctccacttttcata  3637900                                                       <----------DOF2           --------->ARR11(3)                                                      <---------ANAC58           --------->AHL20(1)                                                      <---------ANAC58           <---------AHL20(1)                                                --------->ZAT14            --------->TOE1(3) <---------ANAC55(2)         <---------YAB1     <---------ZAT14       --------->CCA1(2) --------->ANAC55(2)         --------->ICU4 --------->DAG2           <---------ARR11(3)         <---- -------TEIL        ------->TEIL           ---------->DOF2           --------->ARR11(3)      --------   tatacgtataaatcgaacaatgtatttagacattattcgtaaacaaaaagtatagtgctttcaaaaacagagatatacctgaaaatattggagggataat  3638000                                                      --------------->AGL15                                                      <---------------AGL15           --------->CCA1(2)                                                     ----------------->AGL1          <---------ARR11(3)                                                     ----------------->AG            --------->ARR11(1)   <---------ANAC58                                  --------------->AGL15 --------->ATHB12   <---------ANAC46                                  ================================================   <---------ANAC58                     <----------DOF2        ---------->DOF2       --------->ARR11(3) -----YAB1                    <---------ANAC46       <---------------AGL15--------->ICU4 ->ICU4                  <---------MYB46(3)         ----------------->AGL1<---------YAB1      <------   gagaggcttgggagcaattgaaggaagttgttgtttgaaatgctttagacagtttcccattgaaggaaagaagaagatgattagaaagatatgtagattt  3638100                                                             <---------HSFC1(2)                                                        <---------TOE2(3)                      <---------YAB1                   ---------->DOF2                     <----------DOF2              --------------->AGL15                  --------->ARR11(3)           <-----------GT1                  <---------ARR11(3) --------->YAB1  <---------YAB1  --------->AHL20(2)        <---------ARR11(3)        --------->YAB1  <---------------AGL15                           <--        --------->ARR11(3)      --------->AHL20(2)=================================================== =================================================================MADS_MADS                   ------- ---GLK1(1)  <-----------GT1----------->GT1 ----------->GT1  --------->HSFC1(2)          <------NtERF2   ctggcttcaagattttaacaaatctttatagggttttaataagagtttgtaacttattaaagaagctactaaaaaataggtttagactggcctcagaatt  3638200                                                                              <---------------AGL15                                                                              --------------->AGL15                                                                             ----------------->AG                                                                             <-----------------AGL2                                      --------->ANAC58                       <-----------------AGL1                                      --------->ANAC58                       ----------------->AGL3                            --------->ANAC58                                 <-----------------AGL3                            --------->AtLEC2                                 ----------------->AGL1                            --------->ANAC46                                 ----------------->AGL2                     --------------->AGL15                                   <-----------------AG                     <---------------AGL15                                   ========================                     ================================================================================                     =========================================================================MADS_MADS                    <-----------------AGL2                                 ------->TEIL   <----------DOF2  <-----------------AGL1---------->DOF2                  --------->ARR14(2) ---------GT1------------>CBF       ---------->DOF2                       <---------CCA1(2) ====================================MADS_MADS                  <---------ANAC58 -->GLK1(1) <-----------GT1 --------->ANAC58                    <---------ANAC58   caaccctttgaaattttcaatttctcattcaggcaaaacaaagcaaaagacatagaaggcaagtttgggtatgtctgtatccatataaggcaagtttgtg  3638300                <-----------TBP             ----------------->AGL3          <------ZmHOX2a(1)                                    <-----------GT1       <---------HSFB2a(2)                                    <-----------GT1       --------->HSFB2a(2)                                --------->ARR11(3)       --------->HSFC1(1)       ---------->DOF2           <---------ARR11(3)       <---------HSFC1(1)  ---------->DOF2             <------ZmHOX2a(1) ==============================MADS_MADS     ----------->RAV1(1)     <----------DOF2 ==============================MADS_MADS    ----------->HVH21<---------AHL20(2)  <----------DOF2   gaaatttttctaggactcatttatagaatgaaagaaaagagttgatgcgacatagaaggagattttatcttctttgtttcaaacttttattccaaacttg  3638400                                                                                            <--------                                                           --------->MYB46(3)          <---------DEAR3(2)                                  <----------DOF2 <---------YAB1---------->DOF2       <---------MYB46(3)       <---------CCA1(2)          --------->TOE2(3) --------->WOX13(1)             <---------MYB46(3) --------->At4g35610             <---------ICU4  <---------ARR11(3)               <---------AtMYB61 <---------At4g35610       --------->TOE2(3)     --------->ARR11(3)         <---------AtLEC2<--------   ttcagcttcaaatctcattaactcttacacattaatctttaatctctgcaatatcattcaaaccatcaaagacttgttgcatcgatggtcgtttccttgt  3638500                                                                                           --------->ARR14(2)                                                                                         --------->LBD16                                                                                        --------->LBD16                                                                                       <---------LBD16                                                                                       --------->HSFB2a(2)                                                                                      <---------LBD16                                                                                   <---------GLK1(1)                                                                                   --------->GLK1(1)                                                     ===============================HOX2a_HOX2a                                        <---------At4g35610                      --------->ATHB12                                        --------->At4g35610                  ------>ZmHOX2a(2)     <-                                     <-----------HVH21                     --------->ARR14(2)    <<<< -ANAC58      <----------DOF2       <-----------RAV1(1)                    <---------ARR14(2)   <---- -ANAC58   ------->TEIL    <-----------GT1           <------ZmHOX2a(1)    <------ZmHOX2a(1)<---------ARR14(2)   gtccaacttgatgcatcttttgatgagttttcccatttgtgtcgctgcattcacaggataatcgttcccaagtcgaggatcgatgatttcccggatttta  3638600  Previous    Next  AGI:  At5g11400.1    Description:  protein kinase-related. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G11410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66239.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 3636615    to: 3638060    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g11410.1    Description:  protein kinase family protein. similar to protein kinase-related [Arabidopsis thaliana] (TAIR:AT5G11400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66239.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 3638432    to: 3639884    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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