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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
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smallRNA(le3)
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smallRNA(si3)
<-------
TEIL
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smallRNA(si3)
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smallRNA(le3)
<---------
ANAC58
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smallRNA(fl3)
<---------
ANAC58
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smallRNA(si3)
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smallRNA(si3)
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smallRNA(le3)
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smallRNA(si3)
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smallRNA(si3)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(se3)
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smallRNA(i2)
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smallRNA(le3)
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smallRNA(le3)
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smallRNA(le3)
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smallRNA(l2)
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smallRNA(si3)
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smallRNA(si3)
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smallRNA(se3)
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smallRNA(le3)
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smallRNA(le3)
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smallRNA(l2)
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smallRNA(si3)
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smallRNA(le3)
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smallRNA(le3)
<----------
DOF2
------->
GAMYB
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smallRNA(le3)
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smallRNA(fl3)
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smallRNA(si3)
------>
MYB46(1)
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smallRNA(si3)
------>
NtERF2
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
--------->
ARR11(3)
------>
MYB83
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smallRNA(fl3)
--------->
GLK1(2)
--------->
DEAR3(1)
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smallRNA(s)
--------->
MYB46(3)
--------->
ANAC58
<---------
RAP2.6(2)
--------->
TOE1(3)
--------->
ANAC58
<xxxxxxxxxxxxxxxx
smallRNA(s)
<---------
At5g28300
--------->
ANAC46
<---------
ZAT18
--------->
TOE2(3)
--------->
SPL7
--------->
ZAT14
<---------
YAB1
<---------
ARR11(3)
-------->
P
----------->
GT1
<---------
ZAT14
<---------
TOE2(3)
<---------
ALFIN1
--------->
DAG2
-------
-------->
ALFIN1
<---------
TOE2(3)
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smallRNA(le3)
<---------
AHL20(2)
---
RAV1(1)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<-----------
GT1
---------->
DOF2
--------->
AHL20(2)
cagtgcggttttaggtgcgattttggttaacattaacagccaaaatctattatccctacgcctaccaatataaagttgtaaaaacttatttaatacacat
3550100
--------->
REM1(2)
<---------
ANAC46
--------->
AHL20(2)
<---------
At4g35610
--------->
ANAC58
--------->
ANAC46
--------->
ALFIN1
--------->
ANAC58
<--
<---------
ZAT18
<---------
REM1(1)
<----------
ID1
<--------
--------->
ZAT14
--------->
ANAC58
<------
ZmHOX2a(1)
============
<---------
ZAT14
----------->
GT1
--------->
ANAC58
<---------
AtLEC2
--------->
ANAC46
------------
-->
ANAC46
<----------
DOF2
---------->
DOF2
--------->
At4g35610
--------->
ANAC46
--------->
ZAT18
tacagttcacaaaacttttaatatagtaaaaaaaagagaggcaagtgtagctgtgtatggaggagacaagacacaaaacatggaatgtgaactagtttta
3550200
<----------
DOF2
--------->
TOE2(3)
--------------->
AGL15
<---------------
AGL15
<---------
HSFB2a(2)
----------------->
AG
--------->
HSFB2a(2)
<-----------------
AGL1
<---------------
AGL15
<-----------------
AGL2
<----------
DOF2
----------------->
AGL1
--------------->
AGL15
----------------------->
TaNAC69(2)
--------------->
AtSPL8
<---------
ARR11(1)
--------->
GLK1(2)
<---------------
AtSPL3
------->
TEIL
------>
ZmHOX2a(2)
<---------------
AtSPL8
<---------
YAB1
<---------
ARR14(1)
<---------
YAB1
----
ZmHOX2a(1)
<---------
YAB1
<---------
AHL20(2)
<---------
GLK1(2)
<---------
ARR11(3)
-
ZAT6
<-----------------
AGL3
<---------
AHL20(2)
<---------
CCA1(2)
--------->
ARR11(3)
============================
MADS_MADS
<------
NtERF2
<----------
DOF2
<----------
DOF2
--->
AGL15
===================================================================
MADS_MADS
-----
ggagaatgggtacttctttttatagaaaaatgttttttatttttggcagagtatcgaatctctttcctttataggtcttttgatcgagactctagtaaga
3550300
<-------
TEIL
<------
ZmHOX2a(2)
<---------
ARR11(3)
<----------
DOF2
--------->
ARR14(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(1)
<---------
ARR11(1)
--------->
GLK1(2)
<-----------
ARR10
--------->
ARR11(3)
<-----------
GT1
--------->
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
<---------
ARR11(3)
<---------
ARR11(3)
<---------
GLK1(2)
--------->
ARR11(3)
<---------
GLK1(2)
--------->
ARR11(3)
<---------
CCA1(2)
<----------
ID1
<---------
ARR14(2)
<---------
ARR14(1)
<--
---------->
DOF2
--------->
GLK1(1)
<<<<<<<<<
TBF1
--------->
ZAT14
<---------
TOE2(3)
--------->
MYB52(1)
--------->
HSFB2a(2)
<----------
DOF2
------>
ZmHOX2a(2)
<---------
ARR14(2)
--------->
At4g35610
<---------
HSFB2a(2)
<------------------------
ANAC81
--------->
ARR14(2)
----->
DOF2
<---------
ARR14(2)
----------->
ARR10
<---------
LBD16
<----------
DOF2
<---------
DOF5.7(2)
aagagctaaaggccaaaagattctctcgaagatccataagattttcttttcttcttcggatctttcttcactctctttaatacagtatccattaacgctt
3550400
------->
MYC3
<-------
MYC3
<-------
MYC2
------->
MYC2
<---------
ANAC58
<---------
TGA1a
--------->
TGA1a
<---------
ANAC58
--------->
ZAT2
<---------
ZAT2
<---------
RAP2.6(3)
------>
NtERF2
<---------
ANAC46
--------->
DEAR3(1)
----------->
HVH21
<---------
ETT(1)
--------->
ALFIN1
<---------
ANAC58
--------->
ORA47(2)
--------->
ANAC46
<---------
ANAC58
--------->
DEAR3(2)
<---------
ZAT18
<---------
AHL20(2)
--------->
AHL20(2)
--------->
At4g35610
--------->
ZAT14
--------->
AHL20(2)
<---------
AHL20(2)
<---------
At4g35610
--------->
ALFIN1
<---------
AHL20(2)
<---------
YAB1
<-------
TEIL
--------->
ALFIN1
<---------
ANAC46
<---------
YAB1
-------
YAB1
<---------
LBD16
--------->
TOE2(2)
<---------
LBD16
<---------
ALFIN1
--------->
AHL20(2)
gtgattgtgattttattgcggttcataaaaacctgtgtgccgacccagttcgcgcgtgtggtacacacactcttctccactactattaaatattaaatgc
3550500
------>
ZmHOX2a(2)
------>
ZmHOX2a(2)
--------->
CCA1(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
<----------
DOF2
<---------
ARR14(2)
------>
MYB83
<---------
AGP1
------>
MYB46(1)
<------
ZmHOX2a(1)
--------->
GLK1(2)
<---------
ALFIN1
<---------
AtMYB61
<---------
ARR14(3)
--------->
MYB46(3)
--------->
ALFIN1
<-----------
ARR10
--------->
ANAC58
<-----------
RAV1(1)
--------->
ARR14(3)
--------->
ANAC58
*
TSS
<---------
MYB46(3)
----------->
ARR10
tctctcacccactttctata
caactggtggtgaacagaggaacagagcgagacagagacatagagagagagagagaagagagaagatctgatctcatttc
3550600
<----------
DOF2
--------------------->
WRI1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
-
--------->
AHL20(2)
-
--------->
AHL20(1)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC58
<---------
At4g35610
------>
ZmHOX2a(1)
<-----------
GT1
--------->
ALFIN1
-
atttcatttccttcttctgcgagggaaatttatttgtttcctactttgaattcttccccatttactctctcaagagagagagagagtgcgagagattaat
3550700
<------
NtERF2
<---------
DEAR3(1)
<---------
ANAC46
<------
NtERF2
<---------
LBD16
------>
NtERF2
<---------
At4g35610
--------->
ATERF1(1)
<---------
RRTF1(1)
<---------
RAP2.3(1)
<---------
RAP2.3(3)
<---------
RAP2.3(2)
<---------
RAP2.6(2)
<---------
RRTF1(3)
<---------
RRTF1(2)
<---------
DEAR3(1)
--------->
YAB1
---------->
DOF2
--------->
ARR11(3)
-------->
ANAC58
--------->
ZAT6
<---------
ZAT6
<---------
ARR11(3)
-------->
ANAC58
------>
ZmHOX2a(1)
<----------
DOF2
---------->
DOF2
--------->
LBD16
-------->
ANAC46
--------->
TOE2(3)
--------->
TOE2(3)
----------->
GT1
<---------
LBD16
------
acacacaagtgaagacgctccttaactctctcagaattgaaactttagtgagaaagagaagagagagagaaaag
atgtttgcggcggagaatggtctcaa
3550800
<---------
ANAC58
--------->
CCA1(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<-------
GAMYB
<---------
ARR14(2)
<---------
TOE1(3)
<---------
ARR11(3)
<---------
TOE2(3)
--------->
AGP1
<---------
MYB52(1)
--------->
ARR14(2)
--------->
ZAT2
<----------
DOF2
<-
<---------
GLK1(1)
--------->
At4g35610
--------->
ARR11(3)
<---------
--------->
GLK1(1)
<---------
At4g35610
<---------
ARR11(3)
<---------
MYB52(1)
---->
DOF2
<---------
ANAC58
--------->
RAP2.6(2)
---------->
DOF2
------>
ZmHOX2a(1)
aggagatccaaggcttgaagctatatcagcagccattagggttgtccctaatttccctaagaaag
gtctttaaaacttcttgttcctctgttttttctgt
3550900
----
<---------
ANAC58
<---------
YAB1
<---------
ANAC46
----------->
HVH21
<-----------
GT1
<---------
ANAC58
<---------
ANAC58
<---------
MYB59
----------->
GT1
---------
DOF2
<---------
ANAC58
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
----
--
GT1
<-----------
GT1
<---------
ANAC46
==============================
HOX2a_HOX2a
----
tctttgttctgtttttgcaattctctgaagttgtttcttggacag
ggattatgtttcaggacataactacgttgttactggatcacaaggcgtttaaaca
3551000
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AGI:
At5g11160.1
Description:
APT5 (ADENINE PHOSPHORIBOSYLTRANSFERASE 5); adenine phosphoribosyltransferase. similar to APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2), adenine phosphoribosyltransferase [Arabidopsis thaliana] (TAIR:AT1G80050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44252.1); contains InterPro domain Purine/pyrimidine phosphoribosyl transferase, conserved site; (InterPro:IPR002375); contains InterPro domain Adenine phosphoribosyl transferase; (InterPro:IPR005764); contains InterPro domain Phosphoribosyltransferase; (InterPro:IPR000836)
Range:
from: 3550521
to: 3552208
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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