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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
----------->
GT1
<---------
AHL20(2)
<---------
At4g35610
-
--------->
AHL20(2)
------->
TEIL
--------->
At4g35610
----
--------->
ATHB12
<---------------
AGL15
---------->
DOF2
--------
<---------
YAB1
--------------->
AGL15
--------->
ANAC58
<---------
AHL20(1)
--------->
ICU4
----------------->
AGL3
--------->
ANAC46
<---------
ARR11(3)
--------->
ANAC55(2)
----------------->
AG
--------->
ANAC46
<------
NtERF2
<----------
DOF2
<---------
ANAC55(2)
----------------->
AGL1
--------->
ANAC58
--------->
ARR11(3)
tccattgtatgtgaatacatgattaaataaaaaaacaattttgccaaaaaatgaaactaaacactctacaagtaaggcagcgtaacaatatcttttaaag
3122300
<---------------
AGL15
<---------
AHL20(1)
----------------->
AGL3
--------->
AHL20(1)
--------->
KAN4(2)
--------->
ARR11(3)
<---------
ICU4
<-------
---------->
DOF2
<---------
ARR11(3)
<---------
YAB1
--------->
ICU4
--------->
YAB1
--------->
TOE2(3)
--------->
ATHB12
--------->
YAB1
--------->
YAB1
-------->
YAB1
<---------
ALFIN1
<---------
ANAC58
<---------
YAB1
----------->
GT1
----->
YAB1
--------->
ZAT18
<---------
ANAC58
<----------
DOF2
--------------->
AGL15
-->
DOF2
<---------
ZAT18
<---------
AHL20(2)
<---------
ZAT18
----------------->
AG
<--
aataataagaaagcgattttgtccactaccttgaatatttttatgtcttgatttctatagtagacttttttgataattcccaaaaacagtgatatttatt
3122400
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
----------->
GT1
--------->
AHL20(1)
<---------
TOE2(3)
<---------
AHL20(2)
--------->
CCA1(2)
<---------
AHL20(2)
<------
ZmHOX2a(2)
--------->
AHL20(2)
--------->
AGP1
<---------
AHL20(2)
<---------
WOX13(1)
<---------
AGP1
--------->
AHL20(2)
--------->
ATHB12
<---------
ARR11(3)
--------->
AHL20(2)
<---------
YAB1
--------->
ARR11(3)
--
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
------>
ZmHOX2a(2)
--------
DOF2
--------->
AHL20(1)
<---------
ZAT2
---------->
DOF2
--------->
AHL20(2)
cttttaaattaatttatatatttttgattgaatagtttgataaaacttctcacagctagtttatatatagaagaaagatctaataagataaattaagact
3122500
--------->
TOE1(3)
--------->
TOE2(3)
---
<---------
DAG2
<--
<---------
WRKY38(1)
<-------
MYC3
---
<---------
WRKY12
------->
MYC3
<--
<---------
WRKY45
------->
MYC3
----
--------->
WRKY18(1)
<-------
MYC2
---------
<<<<<<<<<<
WRKY11
<-------
MYC4
<---------
AHL20(2)
--------->
ATHB12
<<<<<<<<<<
WRKY6
<-------
MYC3
--------->
AHL20(2)
<------
ZmHOX2a(2)
------>
ZmHOX2a(2)
------->
MYC2
<---------
AHL20(2)
<---------
YAB1
<---------
AGP1
<---------
ZAT18
--------->
TOE2(3)
<---------
ATHB12
--------->
ARR11(3)
---------->
DOF2
----------->
GT1
---------
ttcatcgatcattggccttcaaaaccaatttgatctggtcaaccttattgtaagtagagcacatgtgtacatcatgttgaaaaacataaataaatagtaa
3122600
---------
<--------
-------->
HAHB4
<--------
ATHB1
--------->
ATHB51
--------->
AtLEC2
<---------
ICU4
--------->
ANAC58
--------->
ATHB12
--------->
ANAC58
>>>>>>>>>
E2Fc
<--------
HAHB4
------>
MYB46(1)
<------
NtERF2
--------->
AHL20(2)
------>
MYB83
---------->
DOF2
<---------
YAB1
<-----------
GT1
--------->
ANAC46
--------->
YAB1
<---------
AHL20(2)
--------->
ANAC58
----------->
GT1
<---------
AHL20(2)
------>
AHL20(1)
--------->
YAB1
--------->
ANAC58
<---------
YAB1
<---------
YAB1
-------
AHL20(1)
<--------
ATHB1
--------->
ANAC46
<-----------
GT1
--------->
ICU4
------>
AHL20(2)
<---------
ATHB12
>>>>>>>>>
E2Fd
--------->
AHL20(2)
--------->
AHL20(2)
-------
AHL20(2)
<---------
ATHB51
------>
NtERF2
<---------
MYB52(1)
--------->
ICU4
<---------
ATHB51
----->
ICU4
--------->
ANAC46
--------->
ANAC58
<---------
YAB1
<---------
AHL20(2)
--------->
YAB1
-->
GT1
<---------
MYB59
<----------
ID1
<---------
At4g35610
--------->
ANAC55(2)
--------->
ICU4
>
YAB1
--------->
ANAC46
--------->
ANAC58
--------->
At4g35610
<---------
AHL20(1)
<---------
YAB1
<-
tattttataccgaacatgcaataatacgaaaagacgcgccaaatgagctgttattagtagattaatatatgtaattaccattttataataattagtgtaa
3122700
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
TGA1a
--------->
At4g35610
<---------
AHL20(2)
--------->
TOE2(3)
--------->
ANAC58
--------->
AHL20(2)
--------->
ANAC46
--------->
ANAC46
-->
GT1
--------->
YAB1
<-----------
HVH21
--------->
ANAC58
-
ZAT6
--------->
ICU4
--------->
YAB1
--------->
TGA1a
<---------
At4g35610
----------
GT1
------->
TEIL
*
TSS
<---------
ALFIN1
--------->
At4g35610
<---
attactaaatactgatgagcctatattaata
aactcaagtcacacctcagtctctcacttagctctcacgaagcagaattgaagaaaaac
atggagagag
3122800
------>
ZmHOX2a(2)
<---------
GLK1(1)
<------
ZmHOX2a(2)
--------->
GLK1(1)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
AGP1
<---------
ARR14(2)
<---------
CCA1(2)
------>
MYB83
------>
MYB46(1)
<---------
MYB111(2)
--------->
AtMYB61
<---------
MYB55(2)
<---------
MYB46(2)
---------
--------->
MYB46(3)
<---------
YAB1
<---------
MYB111(1)
<---------
GLK1(2)
<---------
At4g35610
--------->
MYB46(3)
--------->
ANAC58
------>
ZmHOX2a(2)
<---------
YAB1
<-------
TEIL
<---------
LBD16
--------->
ANAC58
--------->
GLK1(1)
---
ZmHOX2a(1)
<----------
DOF2
--------->
ANAC46
<----------
DOF2
<------
ZmHOX2a(2)
gagtttcttattatctatggattccttttaagttcatccaccaaactttcggatctcttttactcaagcttctcggtttgcgatctccatctgatcatag
3122900
------>
ZmHOX2a(1)
<---------
TOE2(3)
<---------
YAB1
------>
ZmHOX2a(2)
<---------
GLK1(1)
--------->
ATHB51
<------
ZmHOX2a(2)
<--------
P
<--------
HAHB4
<---------
AGP1
<---------
MYB52(1)
<---------
ICU4
<---------
ARR11(3)
--------->
LBD16
<---------
YAB1
<---------
CCA1(2)
<---------
HSFB2a(2)
--------->
ICU4
--------->
ANAC55(2)
----
--------->
HSFB2a(2)
--------->
MYB46(3)
================================
HOX2a_HOX2a
<---
<---------
LBD16
--------->
YAB1
<-----------
GT1
<-------
TEIL
--------->
ARR11(3)
<----
>
YAB1
--------->
GLK1(1)
--------->
YAB1
===============================
HOX2a_HOX2a
<-------
TEIL
ttttccg
gtaagtgatttctgtgataaacgaccataattaacattcctctgtgagcgttcatgtgattagatctcgtcgtctcaagatgatgagtttcat
3123000
<----------
DOF2
------->
TEIL
<-----------
GT1
<---------
YAB1
<---------
GLK1(2)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ARR11(3)
<----------
DOF2
---------->
ID1
<---------
GLK1(2)
----->
ARR11(3)
--------->
ARR11(3)
<---------
YAB1
--------->
ARR14(3)
------
AHL20(1)
--------->
ICU4
<-----------
GT1
<---------
ARR14(3)
-----
CCA1(2)
---------->
DOF2
----------->
GT1
----------->
GT1
--------->
ICU4
<-----
atattggattgagctttggtaaagatttttctctttcggtagagattgtaactcttgactattgaaggaaaattagttgtcaagattttgaatgtatttt
3123100
<--------
<--------
<-----------
GT1
<---------
AHL20(1)
<---------
TOE1(3)
--------->
AHL20(1)
<---------
TOE2(3)
--------->
YAB1
<---------
CCA1(2)
<-----------
GT1
<---------
AHL20(2)
<-----------
GT1
<<<<<<<<<
CBP60g
----
AHL20(2)
--------->
At4g35610
<-----------
GT1
--------->
AHL20(2)
<<<<<<<<<
SARD1
<-----
tttttttttaactatgagttgaacgattttatggtttttaactcttaactcgaaattaactactaataagtggattagtccaaatttcttatatattatt
3123200
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AGI:
At5g09980.1
Description:
PROPEP4 (Elicitor peptide 4 precursor). Identical to Elicitor peptide 4 precursor (PEP4) [Arabidopsis Thaliana] (GB:Q9FIA9;GB:Q8L9J1); similar to 52O08_17 [Brassica rapa subsp. pekinensis] (GB:AAZ67563.1)
Range:
from: 3122732
to: 3123965
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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