Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------YAB1                                              --------------->AGL15            <---------AHL20(1)                            <---------ANAC58            <---------AHL20(2)                       <---------MYB52(1)  <---------DAG2            --------->AHL20(1)                   <---------At5g28300     <---------------AGL15      <          <---------YAB1                        <-----------GT1          --------->TOE2(3)          <         --------->AHL20(2)               <---------DAG2  <---------ANAC46                          -         --------->AHL20(1)               --------->TOE1(3)             ----------------->AGL3      -        <---------ICU4                    --------->TOE2(3)           <-----------GT1               -       --------->ICU4                  <-----------GT1    <---------ANAC58                         <-   atcagtctaaatattatatttccctagttagaatgtctaaattaccttatataccgtttggcttaaaacaaatcaccttatatagtgcaagtgaatcact  3100800               --------->YAB1            <---------ICU4            --------->YAB1          <---------MYB52(1)       <---------------------WRI1 --------->HSFC1(2) --------->HSFB2a(1) <---------HSFB2a(1)                                                                 --------->DAG2 <---------HSFC1(2)                                                           <---------TOE2(3) ---------ARR14(2)                                                           ---------->DOF2 -----------ARR10                                                        --------->ZAT6        ------ -------->ARR14(2)                                                      <---------ZAT18    --------->At4g35610 -------->ARR11(3)           <----------ID1    <---------YAB1           --------->ZAT18   --------->MYB52(2) -------->GLK1(2)         ---------->DOF2<----------DOF2            --------->YAB1 ---------->DOF2  < --------GLK1(2)      <---------------------WRI1          <------ZmHOX2a(1)  --------->ZAT14   <-----   agaatcttctccgataatcacaaactcgaaaagaacaaataagctttccattatagattaggacattgaattagaacactaaagtaaaaggttagctata  3100900                            <---------At5g28300                  --------->YAB1                  -------->HAHB4               --------->GLK1(1)               --------->YAB1            --------->ICU4                                         -----    ------------>CBF       <-----------GT1--------->YAB1                               <-----------GT1 ----->TBP    --------->AHL20(2)     <---------YAB1 <---------ALFIN1      ---------->ID1        ----- -------TEIL  <---------AHL20(2) <---------DAG2<---------GLK1(1)    <<<<<<<<<TBF1  <---------ARR11(3) ----YAB1    --------->AHL20(2)------>NtERF2<---------YAB1  <----------DOF2  ------>ZmHOX2a(1)  -----   aatgcatacaatctatttaataatacattttaccgccttataaatgatgaattcccacatttctttattcttcttcgtccttcaagatttaacaaaacac  3101000                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                          --------->ICU4                        -----                                                     ----------->GT1                            <----                                                     ------>ZmHOX2a(2)                     ------>ZmHOX2a(1)                                               ---------->DOF2                       --------->ARR11(3)                                           <---------ANAC46                          <---------ARR11(3)         ---------->DOF2                   <---------ANAC58    <---------TOE2(3)     <---------ARR14(2)  ----------->RAV1(1)                      <---------ANAC58    <---------TOE1(3)     --------->ARR14(2) ---->ANAC58                        <------MYB46(1)--------->ARR11(3)               <---------CCA1(2) ---->ANAC58                        <------MYB83   <---------ARR11(3)          <---------HSFB2a(2)  - ---->ANAC46      ----------->GT1  <---------AtMYB61<------ZmHOX2a(2)          --------->HSFB2a(2) <-   acaacaacaaaaaaagacgatggtgaaactcatggggatggtatagcgtgaaagatcgtaattttgaggtaaatgtttcttctagtatatctcctctaat  3101100     <---------AHL20(2)     --------->AHL20(2) ---->HAHB4                        --------->DAG2 ------ICU4                       ---------->DOF2 ----->YAB1             <---------ATHB12                 <---------ZAT14 ---->ICU4<-------TEIL--------->WOX13(1)                 --------->ZAT18      --------->AHL20(2) -----ATHB51          --------->YAB1                <----------DOF2         <---------ARR11(3)   ---- -------->YAB1       --------->MYB46(3)     <----------DOF2           <-----------GT1        ------->TEIL --------YAB1       ------------>CBF  ----------->GT1    --------->ZAT14    --------->ARR11(3)   ----   tatgaaaataaatacattattcaacaatcactaactaaaagtgtaactttcacactttgtgcagagcatatttttcaagataatatacaaaaatgtatca  3101200                                                   --------->ANAC58            <---------AHL20(2)                     --------->ANAC58           --------->AHL20(2)                 --------->CCA1(2)     --------->ANAC46                        <----------ID1     --------->ANAC58                    ---------->DOF2     --------->ANAC58                  --------->ANAC46 ----->ANAC58  <---------YAB1          --------->ANAC58                  <---------ATHB12 ----->ANAC58<-----------GT1           --------->ANAC58                --------->WOX13(1)           <   agaaactaagcaattttatcatttatggctacttgctgtccaagaaagagacgaagcaagagaacatttgaaacaatcactcgtcgaactgtctagatta  3101300                                                                                   <------ZmHOX2a(2)                                                                                --------->LBD16                                                                               --------->LBD16                                                                              <---------LBD16                                          --------->ANAC46             --------->ANAC46                                    --------->MYB46(3)                 --------->ANAC58           --------->ZAT6          ------>MYB83 <---------ICU4         --------->ANAC58   --------->HSFB2a(1)             ------>MYB46(1)                  --------->DEAR3(1)   <---------HSFB2a(1)           --------->AtMYB61<---------YAB1 ----------->RAV1(1)--------->YAB1 ------ZmHOX2a(1)  <----------DOF2----------->RAV1(1)           --------->MYB46(3) <---------ATHB12--   caggaatgtttcaacactattcttttgtccgaagaccaacaaataccccattattcttactcagaaaccacagacgaaacccccgatcatcaaaaactgt  3101400                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                 ----                                                                                            ---------                                                                                            <------NtERF2                                            <------NtERF2                                  --------->LBD16                                           --------->ANAC58                               --------->DEAR3(1)                                           --------->ANAC58                            --------->ANAC46                                        <---------SPL7                    <---------At4g35610    ----                                   --------->GLK1(2)           <---------CCA1(2)      ------>ZmHOX2a(1)        <---------ARR11(3)     --------->HSFB2a(2)         ------>ZmHOX2a(2)------->GAMYB<---------LBD16    <---------YAB1          ------>ZmHOX2a(1)              ==================================HOX2a_HOX2a --------->GT1--------->HSFB2a(2) <---------GLK1(2)--------->ETT(2)       --------->At4g35610 -------   atagttacaataacttctccaacgagtctccttcgcgattctcgtccgcatcgtcgatcgatctcgtctctaactcaactgtctattcctcgccggagac  3101500                          <---------MYB46(3)          <---------MYB46(3)         <---------WOX13(1)      --------->At4g35610      <---------YAB1     --------->SPL7 -------->ANAC46       --------->LBD16 ---->MYB46(1)         <---------SPL7 ---->MYB83           --------->HSFB2a(2)                                                       ----- ----->TOE1(2)        <---------HSFB2a(2)                     <---------ARR11(3)               <----- >ATERF1(1)          <---------LBD16                          --------->ARR11(3)            <------ZmHOX2a(1) ----->TOE2(2)<---------At5g28300<---------At4g35610          <---------GLK1(2)       --------->GLK1(2) -->GLK1(1)  <-----------GT1   <-----------RAV1(2)  <------ZmHOX2a(1)        <-----------RAV1(1)-----   ctacgactctgattgttacagcctccggacgttgcagatgggttttgcatttgaggagaagaaagattttgagacccttgtgctggagaatataggactc  3101600                                                          <---------WOX13(1)                                                         <-------GAMYB                                                         <---------ANAC58                                                        <------MYB83                                                        <------MYB46(1)                                                        --------->MYB55(2)                                                        --------->MYB52(2)                                                        <---------MYB46(3)                                             --------->ZAT2--------->WRKY12                                             <---------ZAT2--------->WRKY38(1)                                             <---------At4g35610                                          ---------->DOF2<---------ANAC58                    <--------P        -------->ATHB1   <---------AtMYB61                   --------->At5g28300--------->ATHB12 <---------TOE1(2)                  ----------->GT1     --------->YAB1   <---------TOE2(2)           --------->LBD16           <---------YAB1   <---------MYB52(1)          <---------ANAC46      --------->ANAC58    ------>ZmHOX2a(2)                               -         <---------LBD16        --------->ANAC58    <---------MYB46(3)                   <-----------    <-----------RAV1(1)     --------->ANAC46 --------->At4g35610               <-----------HVH21   <- ---->ANAC58   --------->MYB52(1)    <---------ATHB12<-------GAMYB        <---------ARR14(2)       -- ----LBD16--------->ETT(1) <---------HSFB2a(2)      --------->ATHB12      --------->ARR14(2)  ------- ---->ANAC58<------NtERF2  --------->HSFB2a(2)    --------->ARR14(2)   --------->YAB1  --------------   ggaagaatgttgccggagaacggtaagttccagcaagctatcattgaagctggatcgttggttgactcattgttcataaccggtccgattccaaaatgga  3101700  Previous    Next  AGI:  At5g09940.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59760.1); similar to 117M18_2 [Brassica rapa] (GB:AAZ66921.1); contains InterPro domain Protein of unknown function DUF1635 (InterPro:IPR012862) Range:  from: 3101193    to: 3101834    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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