Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------->PIF5                                           <-------PIF5                                          --------->ZAT2     --------->AtMYB61                                    ----------->HVH21        --------->DEAR3(1)                                  <---------O2              --------->MYB46(3)                                  --------->O2<---------AtLEC2      <---------MYB46(3)                                  --------->TGA1a         --------->ANAC46                                  <---------TGA1a  <-------TEIL    <--------P                      --                                  ===================================================bZIP_DOF     <--                             ----------->HVH21<---------ANAC58    <---------MYB52(1)             <---     --------------------->WRI1   ==========================================MYC_MYB           ------- ---------At4g35610         <------NtERF2 --------->At4g35610<---------ALFIN1                -------- -------->At4g35610        <---------ATERF1(1)<---------ANAC58--------->MYB52(1)             -------- -->ZmHOX2a(1)            <---------DEAR3(1) <-------TEIL--------->ZAT18  <----------DOF2--------->CCA1(2) ---->TOE2(3)   <-----------------AGL1  <-----------RAV1(2) <---------MYB55(2)          <----------ARF1   tcagcatccatgaattcttcccactcaggctgcgactcgtgaccaggtgcatgttcatgtccaccaccggttgtttctttctgagaatgagagacaagct  2782700                                                             <---------RAP2.3(1)                                                             <---------ATERF1(1)                                                            <---------At1g77200                                                            <---------DEAR4(1)                                                            <---------DREB2C(2)                                                            --------->ETT(1)                                                            <---------DEAR3(1)                                                   ------>NtERF2                                                  --------->DEAR3(1)                                                 --------->ATERF1(1)                                                 --------->DEAR4(2)                                                 --------->RAP2.3(1)                                                 <------NtERF2<------NtERF2                                                <---------ORA47(2)                                                <---------ATERF1(1)                                                ------>NtERF2<---------ERF1                                                <---------RAP2.6(1)                                                <---------RRTF1(1)                                                <---------RAP2.3(1)                                                <---------DEAR4(2)                                                <---------ERF1--------->RAP2.3(1)                                               --------->ALFIN1                                               --------->DEAR3(1)                                               <---------DEAR3(1)                                               --------->ATERF1(2)                                 --                                               <---------RAP2.3(2)                               ----                                               <---------RRTF1(3)                              <-----                                               <---------RRTF1(2)                              <-----                                               <---------RAP2.3(3)                             <-----                                              ------>NtERF2 <---------RAP2.3(3)             ---------                                              <------NtERF2--------->RAP2.6(3)          <---------ARR14(2)                                              <---------ABI4(1)----------->HVH21  --------->ARR14(2)                                              --------->RAP2.3(1)       =========================HOX2a_HOX2a                                              --------->ATERF1(1)<------NtERF2 --------->ANAC46======                                             <---------RAP2.3(1)----------->RAV1(1)     --------->ARR14(2) ------->LBD16               <---------ALFIN1<---------ATERF1(1)------>NtERF2  --------->ANAC58<----- -------ANAC46            --------->PCF2    <---------DEAR3(1)--------->ATERF1(1) <---------ARR14(2) ------LBD16         <-----------HVH21     <---------LBD16 --------->DDF1 <------ZmHOX2a(2) --------- -->ZAT2            <-----------RAV1(1)  ------>ZmHOX2a(1)<-----------HVH21    --------->ANAC58<----- ->ANAC58       <---------ZAT14    ------>ZmHOX2a(1)     <-----------RAV1(1) --------->MYB52(1)<----- ->ANAC58       --------->ZAT14<---------ALFIN1<---------ATERF1(2)      <------ZmHOX2a(1) ------>ZmHOX2a(2)   ccgggtgagaatgctcaatgtactgtcgctcccactccttatcctcgcggcggcgctccatgtcggcgacaagaggatcaaacggaactggatcgtgacg  2782800 <------MYB46(1) <------MYB83 ------->ALFIN1 ----->ALFIN1 ----O2 ----TGA1a ----bZIP60(2) -->TGA1                                            --------->MYB46(3) =======================bZIP_DOF             <---------ANAC58           <-----------HVH21 ----ANAC46            --------->LBD16       <---------ANAC58       ------>ZmHOX2a(2)   ----------->GT1 -->HVH21            <---------LBD16        --------->ATHB12   ----------------------->TaNAC69(2) ----ANAC58         --------->MYB52(1)     <---------YAB1     <---------MYB46(3)       <---------DEAR3(1) ----ANAC58  ---------->DOF2            --------->ICU4       --------->ALFIN1      <<<<<<<<<TBF1   --   agtgggtttgaaattgaaagaagaccggagttttaagcggtgatgttgattgtgaccaccatggtggtgatcgtggtcacccttcttcttcggtgaataa  2782900                            <---------MYB52(1)                        -------->P                        ------>MYB46(1)                        ------>MYB83                       ------>ZmHOX2a(1)                                                      -------                  <---------ARR14(2)                 <-----------------AGL1                   -------                  --------->ARR14(2)                 <-----------------AG                     <------                 ==============================HOX2a_HOX2a   <---------ANAC58                 <------              <-----------RAV1(2)                 <----------DOF2                       <---------ARR11(3)            ----------->RAV1(1)         <------ZmHOX2a(2)    <---------ANAC46           --------->GLK1(2)          --------->ZAT18 --------->TOE2(3) --------->DEAR3(1)       <---------ANAC46   --------->ARR11(3)     <------ZmHOX2a(1) ========================HOX2a_HOX2a   <---------ANAC58           <-----------ARR10 ------->CCA1(2) <------ZmHOX2a(1)    <------ZmHOX2a(1) --------->ATHB12           ----------->GT1   gagacgaggaagagcaccaggattcctaccgtaatgtataggatcaccgaagctttactcattgggtatttttgtgtaacagaagtagaaaatctcagct  2783000                                                                     ---------->DOF2                                                                   *TSS                                                               <-----------RAV1(1)                                                              ------>ZmHOX2a(2)              <-------                                                             <------ZmHOX2a(2)               --------                           <---------TOE1(3)                --------->ARR14(2)              <--------   --------->TOE1(3)       <---------TOE2(3)                --------->ARR11(3)           <---------ARR11(3)   --------->TOE2(3)---------->DOF2                         <---------ARR11(3)           --------->ARR11(3) -->ZAT2        --------->At4g35610                         --------->AGP1               <---------AHL20(1) -->At4g35610   <---------At4g35610                         <---------AGP1          <---------ANAC46 ---At4g35610  <---------MYB46(3)   --------->ZAT6          <---------ARR14(2)  <---------ANAC58 ---ZAT2   <-----------RAV1(1)    <-----------GT1         ----------->ARR10     <---------ANAC58   tgaaaccctaattttgttggctgaaagttgaggtttttacacttgggaagtgaagaagattagatctgttggaaagatggagtcttgcgaatatatatct  2783100                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 --------->AGP1                 <---------ARR11(3)                 --------->ARR14(2)                                          --------->ANAC46                 --------->ARR11(3)                                        --------->ANAC46    --------->ARR11(3)                                                    ------->GAMYB    <---------ARR14(3)                                                  --------->ZAT14    --------->ARR14(3)                                                 ----------->RAV1(1)    <---------ARR14(2)                                                --------->ANAC46    <---------GLK1(2)          ------>MYB83                         --------->ANAC46          -------    <---------ARR11(3)<---------MYB52(1)                           <---------ZAT18   <---------------AtSPL8 --ARR11(3)      <---------ARR14(2)<XXXXXXXXXXXXXXXXXXXXMIR844*    --------->ZAT18   --------------->AtSPL8 ->ARR11(3)      <---------AGP1------>MYB46(1)   ---------->ID1    --------->RAP2.3(3)        <------ -CCA1(2)  --------->ZAT6    <---------MYB59 <---------ANAC46    --------->PCF2   <---------YAB1   atagaagattttgactctagatctgttacgaccaaattagtcaaatggtttgtagtatttaagagagagcccacaacacacatcaatattgtacatttat  2783200                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                  --------->ATHB12                                                                <--                  -------->HAHB4                                                                  <--                 <---------ATHB12                                   --------->MYB46(3)       --------                 --------->ICU4                                   --------->MYB52(1)     ---------->DOF2             --------->AHL20(2)                                  --------->MYB46(3)     --------->YAB1      --------->ANAC58                                      ----------->GT1            <---------ATHB12      --------->ANAC58                             --------->HSFC1(1)                --------->WOX13(1)      --------->ANAC46        <---------ARR14(2)   <---------HSFC1(1)              ------------>CBF<-   <---------REM1(2)        ------->TEIL           --------->HSFB2a(2)           <----------DOF2  <-- -->AHL20(2) <---------AHL20(2)   <---------At4g35610     <------------CBF --------->ARR14(2)-------- ---AHL20(2)--------->AHL20(2)--------->ARR14(2)   <---------HSFB2a(2) <---------MYB52(1)============   ttctctaaacgcaatttaaatgattaaacgaatttctgctaattttgtcatttcgagaagaattgaaacaaccgttggattcactttcaatcaaagctta  2783300                                 --------->PCF5                                *TSS                              --------->ALFIN1                             <-------MYC3                             ------->MYC4                             <-------MYC4                             ------->MYC3                             ------->PIF5                             <-------PIF5                             <-------MYC2        <---------ARR11(3)   ------->MYC2        --------->GLK1(2)   --------->PIF3(3)        --------->ARR11(3)  <---------PIF3(3) ------------CBF            --------->ANAC46 -------ATHB1               --------->O2 ------->ATHB12             <---------O2                                                 <---------ANAC58 ------->ATHB51             --------->TGA1a                                              <---------ANAC46 ------>HAHB4               <---------TGA1a                                              <---------ANAC55(1) ------>ICU4              <---------ALFIN1                                               <---------ANAC58 -------YAB1            <-----------------PIF3(1)                                       <-------TEIL -------ATHB51         --------->ANAC58                                               ------->MYC3 ->TOE2(3)             --------->ANAC58    <---------ALFIN1                           <-------MYC3 --------ICU4          --------->ANAC46<---------ZAT18              --------->REM1(1) <-------MYC2 -------AHL20(2)     --------->ZAT6    <---------ZAT14            ------>ZmHOX2a(1)   ------->MYC2 ->TOE1(3)      --------->At4g35610    --------->ZAT14        ------>ZmHOX2a(1)    --------->ANAC46 =====================================bZIP_DOF        --------->DOF5.7(2)   <---------YAB1          <   ataattgaaaaatctagcagattacactccacgtggtccagtccaccatcttcttcgtttactccttcctacatcgatattatacacacatgcgtgtgta  2783400                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                -------                                             --------->GLK1(1)                               --------             <---------ANAC58               --------->ARR14(2)                               <-------             <---------ANAC58               --------->AGP1                                   <-------      <---------TOE1(2)                     <---------GLK1(2)                                --------   ------>ZmHOX2a(2)                        --------->ARR11(3)                              <--------  <---------GLK1(1)                         <---------ARR14(2)                              --------- <---------AGP1                             <---------ARR11(3)                          <---------LBD16 <---------ARR11(3)                        <---------At4g35610                   >>>>>>>>>GATA-1 --------->ARR11(3)      <---------GLK1(1) --------->At4g35610        <-------TEIL     --------->MYB52(1) ---------CCA1(2)<---------YAB1     <----------DOF2                  <--------P----------->GT1<------   ttggatctcacgatttcttatcaatggaactcgcttctctttctcagatccccatccaaatcgttttataggtagattagatagataaactacggatata  2783500                                                                          --------->HSFC1(2)                                                                          <---------HSFC1(2)         <-----------------AGL2                                           <---------HSFB2a(1)         <-----------------AGL3                                    <---------ZAT2         <-----------------AG                                      --------->At4g35610         <-----------------AGL1                               <---------HSFB2a(2)         ----------------->AGL2                             <------ZmHOX2a(2)         ----------------->AGL3                            <---------ARR14(2)         ----------------->AG                              --------->ARR14(2)   --------->ZAT6      --------->ATHB12             <-----------HVH21 ----------->GT1 -->ARR14(2)          --------->ICU4            <---------ANAC46   <---------At4g35610  --------->ANAC58 ->CCA1(2)      <---------TOE2(3)               <---------bZIP60(2)--------->ZAT2       --------->ANAC58 ---TaMYB80     --------->ANAC46             ----------->TGA1------>ZmHOX2a(2)        <---------ANAC58 --GLK1(1)     <---------LBD16               ----------->HVH21--------->HSFB2a(2)     <---------ANAC58 ->GLK1(1)     <---------At5g28300         --------->YAB1  <---------AGP1 --------->HSFB2a(1) -ARR14(2)<---------------AGL15            <---------ICU4  --------->GLK1(2)       --------->ALFIN1 >ARR14(2)--------------->AGL15          --------->ANAC58  --------->ARR11(3)    --------->ALFIN1 ---ARR14(2)  <-----------GT1            --------->ANAC58  <---------ARR11(3)    <-----------RAV1(1)   ctcgaactctatccatttacggtattgatttggaaatatggacaagtatgacgttgtcaaggatctgggagctggaaatttcggtgtggctcgccttctc  2783600  Previous    Next  AGI:  At5g08580.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT4G27790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65953.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 2780513    to: 2783067    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g08590.1    Description:  ASK2 (ARABIDOPSIS SERINE/THREONINE KINASE 2); kinase. Identical to Serine/threonine-protein kinase ASK2 (ASK2) [Arabidopsis Thaliana] (GB:P43292;GB:Q9FNM9); similar to SNRK2-5/SNRK2.5/SRK2H (SNF1-RELATED PROTEIN KINASE 2.5), kinase [Arabidopsis thaliana] (TAIR:AT5G63650.1); similar to serine/threonine-protein kinase [Fagus sylvatica] (GB:CAE54075.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Plant protein serine/threonine kinase-like (InterPro:IP Range:  from: 2783332    to: 2786095    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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