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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                      ----------->RAV1(1)
                                                                    <---------MYB59
                                                                    --------->MYB46(3)
                                                                   --------->ANAC58
     ---------->DOF2                                               --------->ANAC58             ----
 <----------ID1                                                  ==================================HOX2a_HOX2a
 --------->ANAC46                                                <------ZmHOX2a(1)             <----
----->REM1(2)     --------->MYB52(1)                          <---------ICU4     ----------->RAV1(1)
->MYC3     ----------->GT1                              --------->PCF2------>MYB46(1)          <----
--MYC3   ---------->DOF2                 <----------DOF2<---------PCF2------>MYB83          ------>ZmHOX2a(2)
 
gtagacgaaaaagaaagaaaaaaacggtcccaaaattccatgggctttaaacacagatgggcccattaggacccaacaaaatagcaacattttgatccat  2609200
                            --------->ANAC58
                            --------->ANAC58
                           --------->LBD16
                          --------->ANAC46
                         <-------MYC2
                         <-------MYC3
                         ------->PIF5
                         <-------PIF4
                         ------->PIF4
                         ------->MYC3
                         <-------PIF5                                  ---------->DOF2
                         ------->MYC2                             ----------->GT1
                        --------->ANAC58                  --------->TOE2(3)
                        --------->ANAC46                  --------->YAB1
                        --------->ANAC58                  --------->TOE1(3)
                       ------->TEIL                     --------->GLK1(2)
                  --------->At4g35610                  <---------GLK1(2)--------->DAG2          ----
                  <---------At4g35610                  <---------ARR14(1)                      -----
      ---------->DOF2<-------TEIL             <----------DOF2---------->DOF2       ----------->GT1
----->ATHB12   <------ZmHOX2a(2)       ----------->HVH21--------->ARR14(2)        <---------------AtSPL8
-----YAB1    <---------At4g35610     <---------ANAC55(2)<---------ARR11(3) ----------->GT1     -----
-----ATHB12  --------->At4g35610     --------->ANAC55(2)<---------ARR14(2)----------->GT1  ---------
 
gattcgtcttaaagtcagatcagatgcacgcgcgaaaaaaacgtgaccccttttaagagaatcttaaagaagaaaaaagggtaaaatggtaaaaaaaaat  2609300
                                          <-------GAMYB
                             --------->ARR11(3)
                        <----------DOF2  <---------DEAR3(2)
                       <---------ANAC58  <---------MYB46(3)
                       <---------ANAC58  ----------->GT1
                 <---------ANAC46       <---------DEAR3(1)  ----------->GT1         <-----------GT1
                 <-----------RAV1(1)   <---------ORA47(1)  ----------->GT1      <<<<<<<<<MYB2
                 --------->ALFIN1    <---------SPL7  <---------ZAT14          <------MYB83
           <---------DEAR3(1)<---------ARR14(2)      --------->ZAT14          <------MYB46(1)
           <---------AtMYB61 --------->ARR14(2)      --------->At4g35610      <---------MYB46(3)
----->ARR11(3)<---------AtMYB61     --------->ALFIN1 <---------At4g35610     <---------AtMYB61
---->CCA1(1)  --------->ALFIN1    <---------ANAC46--------->RAP2.6(3)     <-----------RAV1(1)
---->RVE1(1)<---------MYB46(3) ------>ZmHOX2a(2) --------->ATHB12         --------->ALFIN1
>AHL20(2)  --------->ALFIN1  <---------AGP1    <---------WOX13(1)   --------->ARR11(3)
 
accttgagaagaaggtggtggtgttggctttggatctgggtggacggttgaatgactgcagagcgataaaaaatcatgtgttggttttctccctgtgcga  2609400
                                                                                             <------
                                          <---------AHL20(2)                               ---------
                                         --------->AHL20(2)--------->HSFB2a(2)             ---------
                 --------->YAB1      --------->AHL20(2)    <---------HSFB2a(2)        <---------AHL20(2)
          --------->AHL20(2)      <---------ANAC55(2)------->TEIL                     --------->AHL20(1)
         --------->AHL20(1)      <-------TEIL     <---------YAB1                      --------->AHL20(2)
         <---------AHL20(1) --------->AHL20(2) --------->ICU4                    --------->AHL20(2)
 
aattcttcttaatatatatatcaaaattcaaaaaaatacataaatttaaaattatgaatcttgtagaaactaaacactctgttttaaaataaaataaagg  2609500
            --------->ARR11(3)                               --------->At4g35610
            <---------ARR11(3)                            <------ZmHOX2a(1)
           --------->CCA1(1)                            <---------TOE2(3)
         --------->YAB1                              --------->ALFIN1
----------->GT1    <---------ICU4               <---------TOE2(1)       ----------->RAV1(1)
---TOE2(3) --------->RVE1(1)                    <---------TOE1(1)      --------->ANAC58
>MYB52(1)--------->AHL20(2)                  ----------->HVH21         --------->ANAC58
->DOF2--------->YAB1    <---------ANAC46     <----------ID1  <---------At4g35610  ----------->HVH21<
 
aattggtaacaataatatctgataatggtgtttaccttgggttttgaagggacgaggttgaggaagctccatgaacgacagagcttcgacggtttttgaa  2609600
                                                                  ------>ZmHOX2a(2)
                                                                 <------ZmHOX2a(2)
                                                                 --------->CCA1(2)
                                                                <---------AGP1   --------->ZAT2
                                     <---------ICU4             --------->AGP1   <---------At4g35610
                                     --------->ATHB51           <---------ARR11(3)
                                    --------->ICU4              --------->ARR11(3)
                                   <---------KAN4(2)            <---------ARR14(2)
       <---------ATHB51        --------->LBD16            <---------ZAT2         --------->At4g35610
       <---------AHL20(2)     <---------LBD16             --------->At4g35610    ----------->RAV1(2)
      *TSS                   <---------LBD16              <---------At4g35610 <---------At4g35610
    --------->AHL20(2)      <---------ANAC58              --------->ZAT2<---------ANAC46
    <---------AHL20(2)      <---------ANAC58           <---------At4g35610<---------REM1(1)   ------
   --------->AHL20(2)      --------->ZAT14     <------------CBF --------->ARR14(2)            <-----
   <---------AHL20(2)      <---------ZAT14    --------->DAG2   <---------CCA1(2) <---------ZAT2 <---
----------DOF2       --------->GLK1(2)       --------->ICU4   ----------->ARR10<-----------RAV1(2)
 
ttctttttaaattattctattactaatctgtgcgcgggaattatcgcaaaaattggctagcagctcagatctgcgacttgtagcagctgattcaagagat  2609700
                                                                                               <<<<<
                                                                                               <<<<<
                                                                                               <<<<<
                                                                                             -------
                                                                                             <------MYB83
                                                                                         <---------ARR14(2)
                                                                                         --------->ARR14(2)
                                                                       <---------At5g28300   <------MYB46(1)
                                                               <---------ARR11(3)--------->ARR11(3)
           <---------MYB46(3)  <---------At4g35610             ------->TEIL  --------->YAB1 --------
<---------TOE2(3)              --------->At4g35610             <---------ARR11(1)<---------ARR11(3)
--->ARR11(3)             <---------ARR14(2)           <----------DOF2 <-----------GT1------>ZmHOX2a(1)
----ARR11(3)         --------->At4g35610  --------->At4g35610 <---------CCA1(2)  --------->ARR14(2)
---------CBF<-------GAMYB--------->ARR14(2)        <---------YAB1 <----------DOF2<---------ARR14(2)<
 
attgtggttttcgatggttgaagaagcggaattgagctctgaagttgctgaattatgctttctctgtatctttttaccgataaaaatcctcgaatttggt  2609800
                                      <----------DOF2
                                      <---------DAG2
                                 --------->LBD16
                                --------->ANAC46
                                --------->RRTF1(3)
                                --------->ANAC58
                                --------->RRTF1(2)
                                --------->RAP2.6(2)
                                --------->RAP2.3(3)
                                --------->DEAR3(1)
                                --------->ANAC58
                                --------->RAP2.3(2)
                               --------->RAP2.3(1)
                              --------->At4g35610
                              ------>NtERF2                                                     <---
                              <---------ATERF1(1)                                              <----
                              --------->LBD16                                                  <----
                             --------->ANAC46                                                  <----
                             <---------ALFIN1                                                 <-----
--------->GLK1(2)            --------->DEAR3(1)                                            ------>MYB83
<<<<<WRKY38                <---------ATERF1(1)              --------->GLK1(1)    <---------At4g35610
<<<<<WRKY26             --------->At4g35610             --------->ANAC46         --------->At4g35610
<<<<<WRKY43     --------->TOE2(3)------>NtERF2         --------->LBD16        --------->At4g35610
---->GT1        --------->TOE1(3)<------NtERF2<---------At4g35610         <---------ARR14(2)<-------
->MYB59      <-----------GT1--------->ATERF1(1)   <---------ARR14(2)      --------->ARR14(2)--------
---------GLK1(2)<---------MYB59--------->RRTF1(1) --------->GLK1(1)       --------->GLK1(2)------>MYB46(1)
 
caaattctgctcgatttaacctaaatcagcctccgccgcaacttttctcagcgaattccacagaattcaaacgggagaatcggcagaagtcaccaaattc  2609900
         --------->ARR11(3)
         <---------ARR11(3)
         <---------AGP1   <---------ANAC46               <---------LBD16
         --------->ARR14(2)                              <---------At4g35610
         <---------ARR14(2)                              --------->At4g35610
------LBD16       --------->YAB1                  --------->ICU4
-----ANAC58      <---------At4g35610              <---------YAB1
-----ANAC46      --------->At4g35610            --------->YAB1                          <---------ANAC46
-----ANAC58  <-----------HVH21                  --------->TOE1(3)            --------->AtMYB61
--TEIL   --------->AGP1  --------->MYB59     <-----------GT1  --------->GLK1(1)------>MYB83
--ARR14(2) ------>ZmHOX2a(2)               <---------KAN4(2)  <---------GLK1(1)------>MYB46(1)
->ARR14(2)<------ZmHOX2a(2)  ----------->ARR10  --------->TOE2(3)           --------->MYB46(3)
 
gtggaatcgatagatctgtcatcagaattgggtagaaattcaagagaataaccataattcagcggaattcatagctcaaaccaactcaatttcgcataat  2610000
                                                                                          --------->HSFB2a(1)
                                                                                         ------->TEIL
            ------->TEIL                                                                 --------->ARR14(2)
          --------->YAB1                                                                 --------->SPL7
         <---------ATHB12                                                             <---------ANAC58
     --------->MYB46(3)                                                              ---------------
    --------->ANAC58                                                                 ---------------
    --------->ANAC58                                       --------->ANAC58  <---------At4g35610
   --------->WOX13(1)                       <---------CCA1(2)           --------->CCA1(2)<---------ARR14(2)
  <---------WRKY12    <-------TEIL--------->GLK1(2)---------->DOF2   ----------->ARR10<---------ANAC58
 --------->WRKY18(1) --------->CCA1(2) --------->ANAC46    --------->ANAC58  --------->At4g35610
 
tcaagtcaaccaatgaacatggagatacaaaaactagaatccaagtcaaatctctaaagaacacgaatggattagatttgagctaagaagcgtaccttct  2610100
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AGI:  At5g08130.1   
Description:  BIM1 (BES1-interacting Myc-like protein 1); DNA binding / transcription factor. Identical to Transcription factor BIM1 (BIM1) [Arabidopsis Thaliana] (GB:Q9LEZ3); similar to BIM2 (BES1-INTERACTING MYC-LIKE PROTEIN 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69010.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73549.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598)
Range:  from: 2606201    to: 2609607    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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