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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------->
RAV1(1)
<---------
MYB59
--------->
MYB46(3)
--------->
ANAC58
---------->
DOF2
--------->
ANAC58
----
<----------
ID1
==================================
HOX2a_HOX2a
--------->
ANAC46
<------
ZmHOX2a(1)
<----
----->
REM1(2)
--------->
MYB52(1)
<---------
ICU4
----------->
RAV1(1)
->
MYC3
----------->
GT1
--------->
PCF2
------>
MYB46(1)
<----
--
MYC3
---------->
DOF2
<----------
DOF2
<---------
PCF2
------>
MYB83
------>
ZmHOX2a(2)
gtagacgaaaaagaaagaaaaaaacggtcccaaaattccatgggctttaaacacagatgggcccattaggacccaacaaaatagcaacattttgatccat
2609200
--------->
ANAC58
--------->
ANAC58
--------->
LBD16
--------->
ANAC46
<-------
MYC2
<-------
MYC3
------->
PIF5
<-------
PIF4
------->
PIF4
------->
MYC3
<-------
PIF5
---------->
DOF2
------->
MYC2
----------->
GT1
--------->
ANAC58
--------->
TOE2(3)
--------->
ANAC46
--------->
YAB1
--------->
ANAC58
--------->
TOE1(3)
------->
TEIL
--------->
GLK1(2)
--------->
At4g35610
<---------
GLK1(2)
--------->
DAG2
----
<---------
At4g35610
<---------
ARR14(1)
-----
---------->
DOF2
<-------
TEIL
<----------
DOF2
---------->
DOF2
----------->
GT1
----->
ATHB12
<------
ZmHOX2a(2)
----------->
HVH21
--------->
ARR14(2)
<---------------
AtSPL8
-----
YAB1
<---------
At4g35610
<---------
ANAC55(2)
<---------
ARR11(3)
----------->
GT1
-----
-----
ATHB12
--------->
At4g35610
--------->
ANAC55(2)
<---------
ARR14(2)
----------->
GT1
---------
gattcgtcttaaagtcagatcagatgcacgcgcgaaaaaaacgtgaccccttttaagagaatcttaaagaagaaaaaagggtaaaatggtaaaaaaaaat
2609300
<-------
GAMYB
--------->
ARR11(3)
<----------
DOF2
<---------
DEAR3(2)
<---------
ANAC58
<---------
MYB46(3)
<---------
ANAC58
----------->
GT1
<---------
ANAC46
<---------
DEAR3(1)
----------->
GT1
<-----------
GT1
<-----------
RAV1(1)
<---------
ORA47(1)
----------->
GT1
<<<<<<<<<
MYB2
--------->
ALFIN1
<---------
SPL7
<---------
ZAT14
<------
MYB83
<---------
DEAR3(1)
<---------
ARR14(2)
--------->
ZAT14
<------
MYB46(1)
<---------
AtMYB61
--------->
ARR14(2)
--------->
At4g35610
<---------
MYB46(3)
----->
ARR11(3)
<---------
AtMYB61
--------->
ALFIN1
<---------
At4g35610
<---------
AtMYB61
---->
CCA1(1)
--------->
ALFIN1
<---------
ANAC46
--------->
RAP2.6(3)
<-----------
RAV1(1)
---->
RVE1(1)
<---------
MYB46(3)
------>
ZmHOX2a(2)
--------->
ATHB12
--------->
ALFIN1
>
AHL20(2)
--------->
ALFIN1
<---------
AGP1
<---------
WOX13(1)
--------->
ARR11(3)
ac
cttgagaagaaggtggtggtgttggctttggatctgggtggacggttgaatga
ctgcagagcgataaaaaatcatgtgttggttttctccctgtgcga
2609400
<------
<---------
AHL20(2)
---------
--------->
AHL20(2)
--------->
HSFB2a(2)
---------
--------->
YAB1
--------->
AHL20(2)
<---------
HSFB2a(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ANAC55(2)
------->
TEIL
--------->
AHL20(1)
--------->
AHL20(1)
<-------
TEIL
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
ICU4
--------->
AHL20(2)
aattcttcttaatatatatatcaaaattcaaaaaaatacataaatttaaaattatgaatcttgtagaaactaaacactctgttttaaaataaaataaagg
2609500
--------->
ARR11(3)
--------->
At4g35610
<---------
ARR11(3)
<------
ZmHOX2a(1)
--------->
CCA1(1)
<---------
TOE2(3)
--------->
YAB1
--------->
ALFIN1
----------->
GT1
<---------
ICU4
<---------
TOE2(1)
----------->
RAV1(1)
---
TOE2(3)
--------->
RVE1(1)
<---------
TOE1(1)
--------->
ANAC58
>
MYB52(1)
--------->
AHL20(2)
----------->
HVH21
--------->
ANAC58
->
DOF2
--------->
YAB1
<---------
ANAC46
<----------
ID1
<---------
At4g35610
----------->
HVH21
<
aattggtaacaataatatctgataatggtgtttac
cttgggttttgaagggacgaggttgaggaagctccatgaacgacagagcttcgacggtttttgaa
2609600
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
AGP1
--------->
ZAT2
<---------
ICU4
--------->
AGP1
<---------
At4g35610
--------->
ATHB51
<---------
ARR11(3)
--------->
ICU4
--------->
ARR11(3)
<---------
KAN4(2)
<---------
ARR14(2)
<---------
ATHB51
--------->
LBD16
<---------
ZAT2
--------->
At4g35610
<---------
AHL20(2)
<---------
LBD16
--------->
At4g35610
----------->
RAV1(2)
*
TSS
<---------
LBD16
<---------
At4g35610
<---------
At4g35610
--------->
AHL20(2)
<---------
ANAC58
--------->
ZAT2
<---------
ANAC46
<---------
AHL20(2)
<---------
ANAC58
<---------
At4g35610
<---------
REM1(1)
------
--------->
AHL20(2)
--------->
ZAT14
<------------
CBF
--------->
ARR14(2)
<-----
<---------
AHL20(2)
<---------
ZAT14
--------->
DAG2
<---------
CCA1(2)
<---------
ZAT2
<---
----------
DOF2
--------->
GLK1(2)
--------->
ICU4
----------->
ARR10
<-----------
RAV1(2)
ttctttt
taaattattctattactaatctgtgcgcgggaattatcgcaaaaattggctagcagctcagatctgcgacttgtagcagctgattcaagagat
2609700
<<<<<
<<<<<
<<<<<
-------
<------
MYB83
<---------
ARR14(2)
--------->
ARR14(2)
<---------
At5g28300
<------
MYB46(1)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
MYB46(3)
<---------
At4g35610
------->
TEIL
--------->
YAB1
--------
<---------
TOE2(3)
--------->
At4g35610
<---------
ARR11(1)
<---------
ARR11(3)
--->
ARR11(3)
<---------
ARR14(2)
<----------
DOF2
<-----------
GT1
------>
ZmHOX2a(1)
----
ARR11(3)
--------->
At4g35610
--------->
At4g35610
<---------
CCA1(2)
--------->
ARR14(2)
---------
CBF
<-------
GAMYB
--------->
ARR14(2)
<---------
YAB1
<----------
DOF2
<---------
ARR14(2)
<
attgtggttttcgatggttgaagaagcggaattgagctctgaagttgctgaattatgctttctctgtatctttttaccgataaaaatcctcgaatttggt
2609800
<----------
DOF2
<---------
DAG2
--------->
LBD16
--------->
ANAC46
--------->
RRTF1(3)
--------->
ANAC58
--------->
RRTF1(2)
--------->
RAP2.6(2)
--------->
RAP2.3(3)
--------->
DEAR3(1)
--------->
ANAC58
--------->
RAP2.3(2)
--------->
RAP2.3(1)
--------->
At4g35610
------>
NtERF2
<---
<---------
ATERF1(1)
<----
--------->
LBD16
<----
--------->
ANAC46
<----
<---------
ALFIN1
<-----
--------->
GLK1(2)
--------->
DEAR3(1)
------>
MYB83
<<<<<
WRKY38
<---------
ATERF1(1)
--------->
GLK1(1)
<---------
At4g35610
<<<<<
WRKY26
--------->
At4g35610
--------->
ANAC46
--------->
At4g35610
<<<<<
WRKY43
--------->
TOE2(3)
------>
NtERF2
--------->
LBD16
--------->
At4g35610
---->
GT1
--------->
TOE1(3)
<------
NtERF2
<---------
At4g35610
<---------
ARR14(2)
<-------
->
MYB59
<-----------
GT1
--------->
ATERF1(1)
<---------
ARR14(2)
--------->
ARR14(2)
--------
---------
GLK1(2)
<---------
MYB59
--------->
RRTF1(1)
--------->
GLK1(1)
--------->
GLK1(2)
------>
MYB46(1)
caaattctgctcgatttaacctaaatcagcctccgccgcaacttttctcagcgaattccacagaattcaaacgggagaatcggcagaagtcaccaaattc
2609900
--------->
ARR11(3)
<---------
ARR11(3)
<---------
AGP1
<---------
ANAC46
<---------
LBD16
--------->
ARR14(2)
<---------
At4g35610
<---------
ARR14(2)
--------->
At4g35610
------
LBD16
--------->
YAB1
--------->
ICU4
-----
ANAC58
<---------
At4g35610
<---------
YAB1
-----
ANAC46
--------->
At4g35610
--------->
YAB1
<---------
ANAC46
-----
ANAC58
<-----------
HVH21
--------->
TOE1(3)
--------->
AtMYB61
--
TEIL
--------->
AGP1
--------->
MYB59
<-----------
GT1
--------->
GLK1(1)
------>
MYB83
--
ARR14(2)
------>
ZmHOX2a(2)
<---------
KAN4(2)
<---------
GLK1(1)
------>
MYB46(1)
->
ARR14(2)
<------
ZmHOX2a(2)
----------->
ARR10
--------->
TOE2(3)
--------->
MYB46(3)
gtggaatcgatagatctgtcatcagaattgggtagaaattcaagagaataaccataattcagcggaattcatagctcaaaccaactcaatttcgcataat
2610000
--------->
HSFB2a(1)
------->
TEIL
------->
TEIL
--------->
ARR14(2)
--------->
YAB1
--------->
SPL7
<---------
ATHB12
<---------
ANAC58
--------->
MYB46(3)
---------------
--------->
ANAC58
---------------
--------->
ANAC58
--------->
ANAC58
<---------
At4g35610
--------->
WOX13(1)
<---------
CCA1(2)
--------->
CCA1(2)
<---------
ARR14(2)
<---------
WRKY12
<-------
TEIL
--------->
GLK1(2)
---------->
DOF2
----------->
ARR10
<---------
ANAC58
--------->
WRKY18(1)
--------->
CCA1(2)
--------->
ANAC46
--------->
ANAC58
--------->
At4g35610
tcaagtcaaccaatgaacatggagatacaaaaactagaatccaagtcaaatctctaaagaacacgaatggattagatttgagctaagaagcgtaccttct
2610100
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AGI:
At5g08130.1
Description:
BIM1 (BES1-interacting Myc-like protein 1); DNA binding / transcription factor. Identical to Transcription factor BIM1 (BIM1) [Arabidopsis Thaliana] (GB:Q9LEZ3); similar to BIM2 (BES1-INTERACTING MYC-LIKE PROTEIN 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G69010.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73549.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598)
Range:
from: 2606201
to: 2609607
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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