Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->TOE2(3)           --------->TOE1(3)         ------->TEIL      --------->ANAC58                                                               <---------------      --------->ANAC58                          --------->MYB52(1)                   <---------------      --------->ANAC46        <-----------------AGL1                             <---------AHL20(2)   --------->ZAT18        ------>ZmHOX2a(2)    <---------ZAT14                  --------->AHL20(2) --------------->TaNAC69(2)   ======================================================================= -MYB46(3)--------->HSFB2a(1) ----------------->AGL3   --------->ZAT6         --------->YAB1   tcaagttcacgaaccttacaaatggtgatcgtatcaaatttgggactagttaactgatcactagagagagtgagttttaaaaataaatctaaaattggtt  2594300                                                                            <-------MYC3                                                                            ------->MYC3                                                                      --------->RAP2.6(2)                                                                    --------->At4g35610                                                                    <---------ZAT2                                                                    <---------At4g35610                                                              <---------ETT(1)                                                              ----------->HVH21                                                             ------>ZmHOX2a(2)                                                           ------->TEIL------>NtERF2 <---------GLK1(2)     --------->KAN4(2)                   <---------ARR14(2) --------->ARR14(2)   --------->KAN4(1)                    --------->ARR14(2) <---------ARR14(2)   <---------ICU4                --------->ANAC58----------->RAV1(2) --AGL2               <---------KAN4(1)             --------->ANAC58--------->ZAT2                --- --AGL3  <---------MYB52(1)                    --------->YAB1--------->DEAR3(2)                   --- ==MADS_MADS <-----------TGA1                 <---------YAB1<------ZmHOX2a(2)    ---------->DOF2 ----   ccgaattctctgtttcgtcatcgattattccaaactctagacaaaattatcaaaacgcatggatccgaccagctgccatatgccaaagaaaaaaaaacaa  2594400                                 --------->TGA1a                                 <---------TGA1a                                 --------->DEAR3(1)                                --------->ATERF1(1)                          <------ZmHOX2a(2)                  --------->ANAC58                                 <---------At4g35610                  --------->ANAC58                                 --------->GLK1(1)                 --------->SPL7 <------NtERF2                      <---------GLK1(1)               <-               <---------SPL7  ------>NtERF2                      <---------ARR14(2)               ==              <---------ANAC58 <---------ATERF1(1)                --------->ARR14(2)             <---              <---------ANAC58<---------DEAR3(1)               <---------DEAR3(1)                ----     ======================================bZIP_DOF         <---------RAP2.3(3)              <-------     ---------->DOF2          ----------->HVH21       <---------ARR14(2)    <---------ARR11(3) <-----  <---------HSFB2a(2)      <---------DEAR3(1)         --------->ARR14(2)    --------->ARR11(3) ------  --------->HSFB2a(2)    --------->ARR14(2)         --------->LBD16--------->At4g35610 --------->MYB52(1) ------>ATHB51<---------ANAC46--------->DEAR3(1)  <---------LBD16<------NtERF2        ----------->HVH21 ------>YAB1 --------------->AtSPL3           <---------ANAC58 <---------ANAC46       ----------->TGA1 ----->ICU4  <---------------AtSPL3           <---------ANAC58<---------------------WRI1 <---------ANAC46   ttatcgagaaagagaggcgtacgacaagttcggcgacgtccaagggaggcttgccggatttgagggcggagatgccaagatcgaggcagtgacggagggc  2594500                                                           --------->ZAT14                                                           <---------ZAT14                                                           --------->REM1(2)                                                          --------->ALFIN1                                                        <---------ANAC46                                                      --------->ABI4(1)                                                      ------>NtERF2                                                     --------->DREB2C(2)                                                     <---------ALFIN1                                                    --------->DEAR4(2)                                                    <------NtERF2                                                    --------->ATERF1(1)                                                    --------->RAP2.3(1)       --------->ANAC46                                                    <---------ABI4(2)         <---------ALFIN1             --------->ANAC46                       --------->MYB46(3)      <---------ALFIN1             --------->ANAC55(2)                    --------->DEAR3(2)      --------->AtMYB61             <---------ANAC55(2)                    --------->ORA47(2)     --------->ANAC58    --------->TGA1a                                ------>NtERF2           --------->ANAC46    <---------O2        <---------HSFB2a(2)        <---------ATERF1(1)     --------->ANAC58    --------->O2       <---------LBD16            <---------ALFIN1       --------->AtMYB61    <---------TGA1a    <---------DEAR3(1)         --------->ARR14(2)     <---------ALFIN1 ----------->HVH21   <-----------HVH21            --------->DEAR3(1)     <---------ATERF1(1) ---------DOF2<-----------HVH21                 <---------ATERF1(1)     --------->DEAR3(1) =============bZIP_DOF <---------ANAC46         <-----------HVH21    ------->GAMYB       ------>NtERF2 ------ZAT18 <---------O2           ------>ZmHOX2a(2)--------->DEAR3(1) --------->MYB46(3) <---------ANAC46 ----->ZAT18 --------->O2<------NtERF2          --------->LBD16      ================================ --DEAR3(1) <-------TEIL--------->HSFB2a(2)    --------->ANAC46     --------->MYB46(3)   --------->LBD16 ----ZAT18--------->ARR14(2)   <------ZmHOX2a(2)------>NtERF2   <---------ZAT18  <---------ALFIN1 --->ZAT18<---------ARR14(2) --------->GLK1(1)<---------LBD16   --------->ZAT18------>NtERF2   gctctcacgagggatacgtcgctcgtcggggagatcgatcggaatgtctccggcaccgccgtgtagcgcaatcgcccaccccaccatcttccgccgtata  2594600                   <----------DOF2                     <---------RVE1(1)          <---------MYB52(1)                          <-----------ARR10         ------->MYC3                                 <---------AGP1         <-------MYC3                                 --------->ARR11(3)        <---------O2                                  --------->AGP1        --------->TGA1a                               --------->ARR14(2)              <---------AHL20(2)        <---------TGA1a                               <---------ARR14(2)           <------------CBF        --------->O2                                  <---------ARR11(3)          --------->ATHB51        ======================bZIP_DOF           <-----------GT1                  --------->ATHB12        =======================================bZIP_DOF<------ZmHOX2a(2)         <---------YAB1        =============================================bZIP_DOF     <-------TEIL--------->AHL20(2) ---------->DOF2   <---------DAG2         <----------DOF2<----------DOF2      <---------AHL20(2) =================bZIP_DOF          ---------->DOF2  <---------CCA1(2)  <----------DOF2   <---------- =================MYC_MYB         <---------AHL20(2)*TSS------>ZmHOX2a(2)     <---------YAB1   acttaaagacacgttggctcacttttcccagactattttaaagccttttagttacagatcttttcagattcaaactttatattattattgaattacaagt  2594700                                  <---------YAB1                                  <---------AHL20(2)                                  <-----------GT1                               <---------RVE1(1)                                    <---------AHL20(2)                        --------->YAB1                                             --------->YAB1                     --------->WOX13(1)                                   --------->YAB1                   ------------>CBF  <---------YAB1                      <---------ATHB12      <-----             <---------ANAC58 --------->ARR11(3)                       --------->WOX13(1)    <-------             <---------ANAC46 <---------ARR11(3)                     --------->WRKY18(1) <---------DAG2 -GT1        <---------ANAC58 <---------GLK1(2)                    --------->WOX13(1)<-----------GT1   tttttttttttttttgtgtgtgtcaattacaagatttttattagtaacaaaaatgtgttgttaactagtcagtcaatcaaatctattttaaccttttgaa  2594800                                      <---------At4g35610                          --------->ANAC58                           --------->YAB1                                          --------->ANAC58                       --------->AHL20(1)                                          --------->ANAC46                       --------->AHL20(2)                                        ---------->DOF2                       <---------AHL20(2)                                 --------->ANAC58 ----AtLEC2           --------->AHL20(2)     <---------At4g35610          --------->ANAC58 --YAB1          ----------->GT1--------->ICU4 <---------YAB1           ---------->DOF2   tgaattagatttacaaaaaatgaaaaaaattgtaatcttgagatgtctgatgattcaatcttccttcgcgtccaaaacgccctaaacgcaatattagata  2594900                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                  <--                                                                                                  <XX                                                                   --------->ICU4             <------                                                              --------->ANAC58            --------->At4g35610                                                              --------->ANAC58            <---------ANAC46          <----------DOF2                                 ----------->GT1                 <---------ANAC58  --------->YAB1                                        ---------->DOF2                   <---------ANAC58 <---------ATHB12                                 ----------->GT1  <---------ATHB12  <---------MYB46(3) --------->ICU4          <----------DOF2  ----------->GT1--------->DAG2        <---------AHL20(2) ---   acaatgatcaggctttatagccaatctctttttaaaagtttttgtagtaatatagaaaaaaagtaagaaatcatttagtattttttttggttacctgcat  2595000            <----------DOF2          --------->At4g35610        <---------RAP2.6(2)                                 <---------ZAT14    --------->RAP2.6(3)                                     <---------ZAT18   --------->ATHB12                                         --------->ZAT14   <---------ICU4                                ========================bZIP_DOF  --------->ICU4                                 ---------->DOF2  <---------YAB1                               --------->AtMYB61        -------->P ---------ICU4                                 ==========================MYC_MYB    --------->ALFIN1 -------->YAB1                                --------->MYB46(3) --------->ALFIN1 <---------ZAT2 --------YAB1                                --------->ANAC58  ==================MYC_MYB -------ARR11(3)                   ------->TEIL------->GAMYB--------->ZAT18       <---------At4g35610 XXXXXXXXXXXXXXXXXXMIR167C  <-------TEIL     --------->ANAC58  <---------TGA1a    --------->ZAT2 ---AtLEC2<---------At4g35610      <---------ZAT18        --------->At4g35610   <-----------RAV1(2)-- ------>ARR11(3)        <------ZmHOX2a(1) <------NtERF2   <---------At4g35610 <-----------HVH21    --   gatcatgatggctgctttcttatgtaggagttcattgtaccctcggcaaccaaaagtctgagcgcacttggggcaaccagtttcaggtgggcatttttcg  2595100                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                    --------->CCA1(2)                                                   <---------ARR14(2)                                                   --------->AGP1                                                   --------->ARR11(3)                                                   <---------ARR11(3)            <------ZmHOX2a(2)                    ----------->ARR10           --------->ARR11(3)                 ------>NtERF2           <---------ARR11(3)      ---------->DOF2 <---------AGP1   --------->TOE1(3)           --------->At4g35610 --------->ARR14(2) --------->ARR11(3)       --------->HSFB2a(2)--------->ZAT18                                 -------- <---------ARR11(3)       <---------HSFB2a(2)----------->HVH21                      --------->YAB1 ------->ANAC58        <----------DOF2     --------->At4g35610                     <---------YAB1 ------->ANAC58     --------->GLK1(2)   ---------->DOF2--------->At4g35610       --------->YAB1   caagaccttaagagatcacgagcatcttttagaagctcaaagaagagcggacagatctgcagaacaaaatgttcaagaattagtcatcatattcaacaat  2595200  Previous    Next  AGI:  At5g08100.1    Description:  L-asparaginase / L-asparagine amidohydrolase. Identical to L-asparaginase 1 precursor [Arabidopsis Thaliana] (GB:P50287;GB:Q9LEZ6); similar to L-asparaginase, putative / L-asparagine amidohydrolase, putative [Arabidopsis thaliana] (TAIR:AT3G16150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82634.1); contains InterPro domain Peptidase T2, asparaginase 2; (InterPro:IPR000246) Range:  from: 2593051    to: 2594652    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g08110.1    Description:  DEAD/DEAH box helicase, putative. similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT3G18600.1); similar to hypothetical protein OsI_025884 [Oryza sativa (indica cultivar-group)] (GB:EAZ04652.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67932.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001); contains InterPro domain DNA/RNA helicase, C-terminal; (InterPro:IPR001650); contains InterPro domain DNA/RNA helicase, DEAD/DEAH box t Range:  from: 2594971    to: 2600115    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version