Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------TOE2(3)                                                                                      <xxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                                                   xxxxxxxxxxxxxxxxxx                                                                             --------->GLK1(2)                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                             <-----------ARR10  xxxxx                                                                            <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                            <---------GLK1(2)========                                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          --------->AHL20(2)                                             <---------HSFB2a(2) ========       <--------ATHB1                                                    --------->HSFB2a(2) <------ZmHOX2a(1)       --------->YAB1                 ------>MYB46(1)                  ------>ZmHOX2a(1)<----------DOF2      --------->ICU4        --------->TOE2(3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------ATHB12    --------->ARR11(3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------YAB1      <---------ARR11(3)                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -------ZAT6             <---------GLK1(1)                   <---------YAB1xxxxxxxxxxxxxxxxx>smallRNA(le3) -------->GT1            --------->GLK1(1)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xx ------TOE2(3)        <---------TOE2(3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)xxxxxxxxxxxxxxxxxxx ------TOE1(3)   <----------DOF2      ------>MYB83    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------TOE1(3)   gggttacaatgattttatacttttaagaaatcttagaacctatcacttacaaatgagtaaatgaccattactcctcgagaatctaaggcgcttaaggaag  2560000                                                                                             --------                                                                                             --------                                                                                             xxxxxxxx                                                                                            <xxxxxxxx                                                                                           ----------                                                                                          xxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                   <---------ALFIN1                                                                                   xxxxxxxxxxxxxxxxxx                                                                                  <---------REM1(2)                                                                             --------->ARR14(2)                                                                             <---------GLK1(2)                                                                             <---------ARR14(2)                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                         <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                     --------->HSFC1(2) xxxxxxxxxxxxx           --------->ALFIN1                                         <xxxxxxxxxxxxxxxxxsmallRNA(le3)           ----------->GT1                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------ANAC46                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------ARR14(2)                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->ARR14(2)------>ZmHOX2a(2)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->GLK1(2)<------ZmHOX2a(2)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     <-----------GT1 xxxxxxxxxxxxxxxxxxxxxx  <---------ANAC58   <---------ARR11(3)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ANAC58   --------->ARR11(3)         <---------ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxsmallRNA(i)   ---------->DOF2   <---------ICU4 --------->TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxx>smallRNA(si3)--------->AGP1--------->ATHB51           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxx>smallRNA(fl3) <---------AGP1--------->AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxx>smallRNA(i2)   <---------AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ============================HOX2a_HOX2a  --------->ANAC58  xxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxx =============================HOX2a_HOX2a --------->ANAC58 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->ANAC46 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxx>smallRNA(le3)  --------->RVE1(1)   <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    ---   cattgcgaatcgggtgtgaaaaagatctatttttgaattatttcacacaatttcttaatgtcaattttcgatgctcccatattctccacggtttaaagca  2560100                --------->KAN4(2)               --------->HSFB2a(1)               <---------HSFB2a(1)               --------->KAN4(1)               --------->GLK1(1)               <---------KAN4(1)               <----------TaMYB80              --------->ARR14(2)              <---------ARR14(2)              --------->ARR11(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------ANAC46  <------MYB46(1)  <------MYB83<---------ARR11(3) <---------AtMYB61 ->ANAC58     ---------->TaMYB80                                         <-----------RAV1(1) ->ANAC58xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxx>smallRNA(l2)                                     <-----------GT1 xxxxxxxxxxxxxxxsmallRNA(si3)                                  <---------ICU4 >DOF2  ---------->DOF2                                       --------->AHL20(2) xxxxxxxxxxxx>smallRNA(i2)                                    --------->AHL20(1) xxxxxx>smallRNA(i2)                                         --------->AHL20(2) xxxx>smallRNA(si3)                                          <---------AHL20(2) xxxxxxxxxx>smallRNA(si3)                                 --------->AHL20(2) x>smallRNA(i2)<---------GLK1(1)                     --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxx>smallRNA(le3)                  ----------->GT1<---------AHL20(2)    ---------->DOF2 ------>ATHB12<---------KAN4(2)     --------->AHL20(2)   --------->AHL20(2)    <xxxxxxxxxxxxxxxxxxxxx   agattggtgggaaagggatattctcgcatcgattacaatgaaatatgggttgaaaaaaaataaaaaaattactcaatgttgcaccaaaaaccagaaaact  2560200                                                                                          <----------                                                                                          -----------                                                                                          <---------ICU4                                                                                          <----------                                 ------>MYB46(1)                                      <---------AHL20(1)                                 ------>MYB83                                         --------->AHL20(2)                                 ----------->RAV1(1)   <---------ZAT14                <---------AHL20(2)                    --------->DAG2              --------------->AtSPL8                --------->AHL20(1)            --------->AHL20(2)--------->ANAC46  --------------->AtSPL3               <---------AHL20(2)            --------->YAB1  <-----------GT1--------->AtMYB61                         --------->AHL20(2)     <---------ANAC46----------->GT1     >>>>>>>>>>MYB80    <-----------HVH21    --------->AHL20(2) xxsmallRNA(le3)   ---------->DOF2  --------->TOE2(3)  --------->ZAT14         <----------DOF2      -   ctaagttgcgctaataaaaaaaaaagttataaacccaacatcaaaccaaaaccgtactaaactgtcccatatgagatttagctttaaataaattagtact  2560300                  --------->AHL20(1)                  <---------AHL20(1)       --------->DOF5.7(2)      --------->TOE1(3)      --------->TOE2(3)      --------->YAB1             --------->ANAC58                                     <---------ANAC46   --------->MYB52(1)            --------->ANAC58                                     <---------ANAC58 -----AtSPL3      <---------AHL20(2)                 <---------WOX13(1)               <---------ANAC58 ---->AtSPL8      --------->AHL20(2)                <------------CBF           <-----------TBP -----AtSPL8     <---------AHL20(2)               <---------YAB1             --------------->AGL15<-- -------->YAB1   --------->AHL20(2)    <-------TEIL--------->ATHB12        ------>ZmHOX2a(1)   *TSS   tctcataacgataactaaattaaatttccctagccaagacatacatatagttttgattgacaaaaaaaaaaaaactcctctatttatagcttgtgttttg  2560400                                                                                           <---------ARR14(2)                                                                                           ------->TEIL                            ------>MYB83                                                   <---------                            ----------->RAV1(1)                                            <---------ARR11(1)                            ------>MYB46(1)                                                <---------ARR11(3)                           --------->ANAC46                                               <---------CCA1(2)                <---------YAB1--------->ZAT6                     --------->MYB46(3)       <---------ARR14(1)          <-----------GT1--------->ANAC46                      --------->ANAC46          --------->LBD16  ------>ZmHOX2a(1)      --------->ANAC58                     ------>ZmHOX2a(1)       ------>ZmHOX2a(1) --------->TOE2(3) --------->AtLEC2                        ------>ZmHOX2a(1)    ------>ZmHOX2a(1) ---------GT1  -------->P--------->ANAC58              --------->ARR14(2) ------>ZmHOX2a(1)--------->ARR14(2)   tttcctcatttttcacttaccattcaaacccaacactatggcaactctatttctcacaatcctcctagccactgtcctcttcctcatcctccgtatcttc  2560500                           ------->GAMYB                        ------->GAMYB                       <---------MYB52(2)                                         <---------ZAT18                  --------->RAP2.6(2)                                        ========================                  ==============================RAV                          <---------TGA1a                  ----------->RAV1(1)                                        <---------O2                ------>NtERF2                                                --------->O2               --------->RAP2.3(3)      <---------PCF5                       --------->TGA1a               --------->DEAR3(1)     --------->LBD16                  ------>MYB46(1)              --------->ERF1         --------->DEAR3(1)                ------>MYB83             --------->At4g35610    <---------LBD16                --------->HSFC1(2)            ------->GAMYB --------->MYB46(3)                       <---------HSFC1(2)            --------->ANAC46        ----------->RAV1(2)           --------->GLK1(1)    <-----------HVH21  <---------MYB111(2)                        <---------GLK1(1)   --------->DEAR3(1)  <---------MYB55(2)                    --------->At4g35610  --------->ZAT18 <---------At5g28300   --------->MYB46(3)------>NtERF2     --------->ATHB12<---------ALFIN1 --ARR10   --------->MYB46(3)     <---------ALFIN1        <---------ATHB12----------->HVH21   tctcaccgtcgcaaccgcagccacaacaaccgtcttccaccggggccaaacccatggcccatcatcggaaacctccctcacatgggcactaagcctcatc  2560600                                                                                      --------->LBD16                                                                          ------>NtERF2----------->HVH21                                                                        <------NtERF2<---------ANAC58                                                                        --------->RAP2.3(1)                                                                        --------->ATERF1(1)                                                                        --------->DEAR4(2)             ----------->GT1        ------>ZmHOX2a(1)                  <---------RAP2.3(1)            --------->ICU4         --------->ANAC46                   <---------DEAR3(1)        ------>NtERF2           --------->ARR14(2)                   --------->ATERF1(1)          <--        --------->LBD16         <---------ARR14(2)              <---------ANAC46  <---------ARR14(2)       --------->ANAC46 --------->SPL7<---------ALFIN1 <---------ANAC46<---------ATERF1(1)        ---    --------->ARR14(2)  <---------At5g28300           <-------TEIL  <-----------HVH21<---------ANAC58    <---------ARR14(2)  --------->RAP2.6(3)  ------>NtERF2   --------->O2 <---------At4g35610     ---   <----------DOF2<-----------------AGL1 --------->DEAR3(1)  <---------O2--------->DEAR3(1) <------NtERF2 =============bZIP_DOF --------->MYB52(1)--------->AtMYB61   --------->ANAC46     --------->ARR14(2)   gaaccctttccgccatggttactacttacggccctatcctccacctccgactagggttcgtagacgtcgtggtcgccgcttctaaatccgtggccgagca  2560700                                            <-----------RAV1(2)                                            <---------LBD16                                        ------>MYB46(1)                                        ------>MYB83                                      <---------MYB55(2)                                      --------->MYB46(3)                                      <---------MYB111(2)                      ------>ZmHOX2a(2)                                      <---------MYB46(2)                     <---------ARR14(3)                                      --------->AtMYB61                      <-----------ARR10-------                                      <---------MYB111(1)                    <---------AGP1  <-------               --------->ANAC46      --------->ANAC46                        --------->AGP1 <--------               --------->ANAC58    --------->AtMYB61                         <---------ARR14(2)               --------->ANAC58   <---------MYB55(2)                         --------->ARR14(2)            --------->ANAC58      --------->MYB46(3)                         --------->ARR11(3)            --------->ANAC46    --------->ORA47(1)            <---------ANAC46<------ZmHOX2a(2)            --------->ANAC58    <---------ATERF1(1)       ------->MYC3       <---------ARR11(3) -------ARR14(2)                ------>NtERF2  <------ZmHOX2a(1)   <-----------GT1        ------->TEIL ------>ARR11(3)               --------->DEAR3(1)         <-------MYC3       --------->ARR14(3)------ ------>ARR14(2)------>NtERF2 --------->DEAR3(2) --------->At4g35610     --------->YAB1  <-----------GT1   gttcttgaaaatacacgacgccaatttcgctagccgaccaccaaactcaggagctaaacacatggcatataactatcaagatcttgtctttgcaccttac  2560800                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                               --------->HSFB2a(1)                                                          <---------HSFB2a(2)                     ---                                                          --------->HSFB2a(2)                 ------- -->MYB52(1)                                           --------->ARR11(3)          ----------->GT1<-- --SPL7                                            ---------->DOF2               <-----------RAV1(2) -DAG2                                          <---------At4g35610           --------->ETT(2)------- --->SPL7     <-------GAMYB                     --------->At4g35610           ----------->HVH21 <----   ggacaccgatggagactgttgagaaagattagttctgttcatctattttcagctaaagctctcgaagatttcaaacatgttcgacaggtaaaacaattat  2560900  Previous    Next  AGI:  At5g07990.1    Description:  TT7 (TRANSPARENT TESTA 7); flavonoid 3'-monooxygenase/ oxygen binding. Identical to Flavonoid 3'-monooxygenase (CYP75B1) [Arabidopsis Thaliana] (GB:Q9SD85); similar to CYP706A5 (cytochrome P450, family 706, subfamily A, polypeptide 5), oxygen binding [Arabidopsis thaliana] (TAIR:AT4G12310.1); similar to flavonoid 3'-hydroxylase [Matthiola incana] (GB:AAG49301.1); similar to flavonoid 3'-hydroxylase [Lobelia erinus] (GB:BAF49324.1); similar to flavonoid 3'-hydroxylase [Brassica napus] (GB:ABC58722.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128 Range:  from: 2560395    to: 2563110    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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