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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ZAT2
--------->
ANAC58
--------->
ANAC58
------>
MYB46(1)
------>
MYB83
--------->
ANAC55(2)
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
<---------
ANAC55(1)
--------->
ANAC46
<---------
ANAC58
------->
GAMYB
<---------
ANAC46
<---------
ALFIN1
<-----------
RAV1(1)
<---------
REM1(2)
----------->
RAV1(2)
--------->
ETT(2)
--------->
ANAC58
--------
<---------
At4g35610
<---------
ANAC58
--------->
ANAC58
--------
<-----------
GT1
<---------
ANAC58
--------->
ANAC46
<-------
<---------
ARR14(2)
<----------
DOF2
--------->
WOX13(1)
<--------
--------->
ARR14(2)
<---------
GLK1(2)
---------->
ID1
<-----------
HVH21
--------->
ZAT2
-
--------->
AtLEC2
<---------
ANAC58
---------->
DOF2
--------->
bZIP60(2)
<--------
tagatttgaaatgcaaattttcac
ctgttgcgtaaacagcttcttcaaagctttcttgtcgatatcaaacatgtcactcaacacaccaagctccatcatt
2541700
--------->
ARR14(2)
<---------
ARR14(2)
<----------
TaMYB80
<
->
ATHB12
<---
>
ATHB1
--------->
HSFB2a(1)
--
ICU4
<---------
HSFC1(2)
-
YAB1
----------->
GT1
<---------
HSFB2a(1)
--------->
TaMYB80
---------->
DOF2
----------->
RAV1(2)
--------->
HSFC1(2)
-
ATHB12
--------->
AtLEC2
<---------
ICU4
---------->
DOF2
<---------
TOE2(3)
ggcatatac
ctattgccatggaaacacaaaagcagtaagaatcaccagggacatcaaagtgaaacagagtaagttgcaaatacaaattaagaaaattcca
2541800
--------->
LBD16
--------->
ANAC46
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
LBD16
<------
ZmHOX2a(2)
--------->
AGP1
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
=============================
RAV
<---------
ARR14(2)
<-----------
RAV1(1)
--------->
ARR14(1)
<-----------
ARR10
--------->
MYB46(3)
--------->
CCA1(2)
----------->
ARR10
--------->
ANAC58
--------->
ARR11(1)
<---------
ANAC46
--------->
ANAC46
------>
NtERF2
--------->
ARR14(2)
<---------
ANAC58
--------->
ANAC58
<---------
RAP2.6(3)
<---------
ARR14(2)
<---------
ANAC58
--------->
TOE1(2)
<---------
ETT(1)
----------->
HVH21
--------->
ANAC58
--------->
ARR14(3)
<------
ZmHOX2a(2)
-----
----------
DOF2
--------->
ANAC58
<---------
ARR14(3)
--------->
ARR14(2)
>>>>>>>
------
ALFIN1
<-------
TEIL
---------->
DOF2
------>
ZmHOX2a(2)
<---------
ARR14(2)
<-----------
RAV1(2)
cac
ttttgtgacagatacgaattgactagcaaagtagcgtgagatcttcccgcagaacaagcgacgatccactgttgccgacaattcgacaggttagacc
2541900
----------->
RAV1(2)
--------->
ZAT2
<---------
At4g35610
<---------
At4g35610
--------->
At4g35610
<----------
CDC5
--------->
ANAC46
<---------
At4g35610
--------->
LBD16
--------->
GLK1(2)
--------->
LBD16
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
LBD16
<------
ZmHOX2a(2)
<---------
GLK1(2)
<---------
HSFB2a(2)
<------
NtERF2
------>
ZmHOX2a(1)
--------->
At4g35610
--------->
HSFB2a(2)
--------->
ANAC58
--------->
TOE1(2)
<---------
ZAT2
<----------
ID1
--------->
At4g35610
<---------
HSFB2a(2)
---->
AtMYB61
--------->
LBD16
----------->
GT1
<---------
At4g35610
--------->
HSFB2a(2)
>>>>>>>>>>
LFY
--------->
At4g35610
----------->
TGA1
--------->
LBD16
--------->
ANAC58
-
actggttcctaagattccgctgagcagctggtctccatagcctcatcgatgacgaaaaactccccggagatggagatgaagaagccagcgatcgcgaaga
2542000
--------->
TOE1(2)
--------->
ARR14(2)
<---------
ARR14(2)
<------
NtERF2
--------->
LBD16
<---------
ANAC46
<---------
LBD16
--------->
ATERF1(1)
--------->
RAP2.3(1)
--------->
At4g35610
<---------
At4g35610
<------
NtERF2
<---------
DEAR4(2)
<---------
RAP2.3(1)
<---------
RRTF1(1)
<---------
ORA47(2)
-
<---------
ERF1
<
------>
NtERF2
<-
<---------
RAP2.6(1)
--
<---------
ATERF1(1)
<---
<---------
RAP2.3(3)
<----
<---------
DREB2C(2)
<----
<---------
RAP2.3(2)
<----
<---------
RRTF1(2)
<----
<------
NtERF2
<---------
ATERF1(2)
<----
--------->
LBD16
--------->
ATERF1(2)
-----
<---------
ANAC46
--------->
ALFIN1
<----
--------->
DEAR3(1)
<---------
DEAR3(1)
-----
<------
NtERF2
<---------
ABI4(1)
<----
--------->
ATERF1(1)
<---------
RRTF1(3)
<-------
<---------
LBD16
--------->
ATERF1(1)
------>
ZmHOX2a(1)
------>
NtERF2
<---------
ATERF1(1)
--------->
ZAT6
<--------
-------->
ANAC46
<-----------
RAV1(2)
<---------
ALFIN1
-----
agacgccggagatggagaagcaggcggcggaaactgcgagatgctcat
cgaatacaaaacgagttttttgagcttgagtcacactcctaaactctgttac
2542100
<------
NtERF2
------>
NtERF2
--------->
LBD16
--------->
LBD16
<---------
LBD16
<------
NtERF2
<---------
LBD16
--------->
ATERF1(1)
----->
NtERF2
---------
RAP2.3(1)
--------
DEAR3(1)
------->
DEAR3(1)
--------
HVH21
-----
ANAC58
-----
ANAC58
<------
NtERF2
--------->
YAB1
-----
TGA1a
--------->
LBD16
<---------
YAB1
-----
bZIP60(2)
------>
NtERF2
------------>
CBF
-----
ANAC55(2)
<---------
ATERF1(1)
<---------
DAG2
----------->
GT1
---->
O2
<---------
ATERF1(2)
<----------
DOF2
--------->
DAG2
-----
O2
--------->
DEAR3(1)
<---------
ZAT2
---------->
DOF2
---->
bZIP60(1)
<---------
DEAR3(1)
--------->
ZAT2
--------->
ANAC58
-------
-----
bZIP60(1)
--------->
ATERF1(2)
--------->
At4g35610
--------->
ANAC58
<-------
--
MYB52(1)
--------->
SPL7
<---------
At4g35610
--------->
ANAC46
--------->
ICU4
---
HVH21
--------->
MYB46(3)
--------->
MYB46(3)
<----------
ID1
----------->
GT1
---->
ANAC55(2)
--------->
ATERF1(1)
*
TSS
--------->
ANAC46
--------->
CCA1(2)
<------------
CBF
gtcgccgggaattgaacggccggcgatagtttgtttt
ctatttccacccagcttagggctttatgaagaaatacgaaaaggttacaattgtaattttcat
2542200
<---------
YAB1
----------->
GT1
--------->
YAB1
<------------
CBF
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
<---------
AHL20(2)
<---------
YAB1
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<---------
ICU4
--------->
AHL20(1)
--------->
ICU4
<
<---------
AHL20(1)
<---------
ATHB51
<-
<---------
AHL20(2)
<---------
ATHB12
--------->
GLK1(2)
--
--------->
AHL20(2)
--------->
WOX13(1)
<---------
GLK1(2)
<------
ZmHOX2a(2)
<---------
AHL20(2)
------------>
CBF
<------
ZmHOX2a(2)
<---------
AGP1
-->
YAB1
--------->
AHL20(2)
--------->
ICU4
<---------
AHL20(2)
<---------
At5g28300
--
YAB1
----------->
GT1
<---------
AHL20(2)
*
TSS
--------->
AHL20(2)
<---------
ICU4
-----
aaacttctgaacttgtttaaattaattttaattgtaattagcaatt
atgtctatataatagatcaatagaatctctaagaagaattacagtagatcagat
2542300
--------->
ANAC58
--------->
ANAC46
--------->
bZIP60(2)
--------->
ANAC58
<---------
LBD16
<------
ZmHOX2a(2)
<---------
ALFIN1
<---------
At4g35610
--------->
LBD16
<---------
WRKY38(1)
--------->
ZAT2
---------->
DOF2
--------->
ANAC55(2)
<------
ZmHOX2a(2)
--------->
MYB52(1)
--------->
CCA1(2)
<---------
O2
<---------
WRKY12
------>
MYB83
==========================
HOX2a_HOX2a
--------->
ANAC58
--------->
ARR14(2)
------>
MYB46(1)
--------->
ARR11(3)
--------->
O2
<---------
DEAR3(2)
<-----------
GT1
<---------
ARR11(3)
<---------
ANAC55(2)
<---------
DOF5.7(2)
<
---------
AHL20(2)
--------->
AGP1
<---------
LBD16
<---------
DEAR3(1)
<
--------
AHL20(1)
--------->
GLK1(1)
<-----------
HVH21
<---------
At1g77200
<------
NtERF2
------->
AHL20(1)
<---------
GLK1(1)
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
ARR14(2)
---->
CCA1(2)
--------->
At4g35610
<---------
TOE2(3)
<---------
ANAC46
----------->
HVH21
<-
atatatttaccaatcggagcttcagagagatccaaagagagagattgagg
atgtctcacagtcacgggaacgcttcgtcggtgaacgatccacggcagcc
2542400
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
HSFB2a(1)
<----------
TaMYB80
------>
NtERF2
<---------
HSFB2a(1)
--------->
LBD16
<---------
ARR14(2)
<---------
DEAR3(1)
<-----------
ARR10
--------->
ANAC46
--------->
GLK1(2)
<---------
LBD16
<---------
ARR14(3)
<---------
ARR14(2)
--------->
ARR14(3)
--------->
ATERF1(1)
<------
NtERF2
--------->
WRKY45
<-----------
HVH21
---------->
DOF2
--------->
DEAR3(1)
------>
NtERF2
<------
NtERF2
<---------
ANAC46
--------->
WRKY12
<---------
ATERF1(1)
--------->
RAP2.6(2)
<---------
LBD16
<---------
MYB52(1)
--------->
DOF5.7(2)
<------
------>
NtERF2
<------
NtERF2
<-------
GAMYB
--------->
DEAR3(1)
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
ATERF1(1)
<-------
TEIL
------>
ZmHOX2a(1)
<---------
ATERF1(2)
<---------
RAP2.3(1)
<---------
ARR14(2)
<------
NtERF2
--------->
ATERF1(2)
<---------
ANAC46
--------->
ARR11(3)
--------->
ARR14(2)
<---------
DEAR3(1)
<---------
LBD16
--------->
ANAC58
--------->
ARR14(2)
--------->
LBD16
<---------
LBD16
<-----
---------
RAP2.3(1)
--------->
ANAC58
<---------
ARR11(3)
<---------
LBD16
<---------
MYB52(1)
<--------
---------
ATERF1(1)
--------->
ANAC46
<------
ZmHOX2a(1)
--------------------->
WRI1
<---------
DEAR3(1)
--------
DEAR3(1)
<---------
LBD16
--------->
LBD16
--------->
WRKY38(1)
<-------
GAMYB
<------
NtERF2
ttcggcggcaaagccttacattccacggcctgtagcgccggaggatcttcccgttgactactccggattcatcgccgttatcctcggcgtctccggcgtt
2542500
<---------
ANAC46
<------
MYB83
<---------
MYB46(3)
<------
MYB46(1)
----------->
GT1
<---------
MYB46(3)
--------->
MYB111(2)
<---------
AtMYB61
<-------
GAMYB
<---------
DEAR3(1)
--------->
At5g28300
------>
ZmHOX2a(2)
--------->
MYB46(2)
----------->
GT1
<---------
At4g35610
--------->
MYB55(2)
<
--------->
LBD16
================
HOX2a_HOX2a
<--------
P
------>
ZmHOX2a(2)
<---------
ANAC46
------>
ZmHOX2a(1)
<---------
MYB55(1)
-
----
DOF2
<---------
YAB1
<---------
MYB46(3)
<---------
MYB52(1)
<---
----
MYB52(1)
<-----------
GT1
<---------
YAB1
<-------
GAMYB
<--------
-------------
WRI1
<-----------
GT1
<---------
ATHB12
<---------
LBD16
---------
atgttcagg
gtaaattttcatttctcctcttctgatcgttgctctgttagaaatcaattcagtcgtagaaactagtactccggttggtgacttagatcgt
2542600
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AGI:
At5g07950.1
Description:
similar to unnamed protein product [Vitis vinifera] (GB:CAO64456.1)
Range:
from: 2540285
to: 2542137
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g07960.1
Description:
Identical to UPF0139 protein At5g07960 [Arabidopsis Thaliana] (GB:Q9SD88); similar to unknown [Populus trichocarpa] (GB:ABK93624.1); contains InterPro domain Protein of unknown function UPF0139 (InterPro:IPR005351)
Range:
from: 2542247
to: 2543460
Orientation: Forward
Links:
TAIR
MIPS
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