Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------ZAT18                                                                                 <-------TEIL                                                                                 --------->ZAT18                                                                         <-----------ARR10                                                                         <---------ARR14(2)                                                                         --------->GLK1(2)                                                                 --------->CCA1(2)             ------                                                                <---------ARR14(2)             <-----                                                                --------->ARR11(3)             <----- ----->ZmHOX2a(2)                   <---------ALFIN1            --------->ARR14(2)            ------- ---At4g35610           <----------DOF2       <-------TEIL      --------->ARR11(1)       <---------TOE2(3) -HVH21       <---------YAB1  --------->MYB52(1)            ---------->DOF2  --------------->AtSPL8   gatccaagtctaaactataaatgtccctttgaaaacggacacttcaagtacagctatatcacaaaagatttggcaaatctaagtacacatttagatttgg  2530500  <---------------AtSPL8                                                                           <- ----->GT1                                                               --------->AHL20(2)        <- -MYB46(1)                                                          ----------->GT1           <------ -MYB83           --------->ALFIN1     --------->AHL20(2)      --------->YAB1                 <------ -->MYB59  --------->GLK1(2)   <---------ALFIN1   <----------DOF2 ---------->DOF2  <---------CCA1(2)   taaatttgtacagaatcagtgtgttccatttcaacacctaaaaatatagtcacttttaaaaccaaaaataaagaaaaaaatagtcatatcaccgatgctt  2530600                                                    ------>ZmHOX2a(2)                                                   --------->GLK1(1)                                                   <------ZmHOX2a(2)                                                  <---------ARR14(2)                                                  ------->TEIL                                                  <---------AGP1                                                  --------->ARR11(3)                               <-                                                  --------->ARR14(2)                              <--                                                 <---------CCA1(2)                                ---                                               --------->ANAC58                                 -----        --------->YAB1                         --------->ANAC46                               -------       <---------YAB1       --------->YAB1     --------->ANAC58                               <------     --------->YAB1        <---------YAB1      <---------ANAC55(2)                         <---------ARR14(2)     <---------ICU4      --------->YAB1        --------->ANAC55(1)                         --------->ARR14(2) --------ANAC58          <---------ICU4        --------->ANAC55(2)                        ------>MYB46(1) --------ANAC58    <---------ANAC58          --------->MYB52(1)                      <----------ID1-- ---ANAC58         <---------ANAC58         ----------->HVH21              ----------->GT1------>MYB83 ---ANAC58    --------->TOE1(3) --------->DAG2<---------LBD16            ----------->GT1--------->AtMYB61   agcttgatcatcataagcttagcttgatcatcataaggtactgagcctcacggatctcgaggttagaaataagaagagagaaaaaaaacaccaaatcgga  2530700                                                                           --------->CCA1(2)                                                                          --------->ARR11(3)                                                                 <---------HSFB2a(2)                                                                 --------->HSFB2a(2)                                                             ------>ZmHOX2a(2)                                                            --------->HSFB2a(1)                                                            --------->GLK1(1)                                                            <------ZmHOX2a(2)                                 --------->TOE1(2)         <-----------ARR10      --------->ANAC58           --------->TOE2(2)         <---------ARR11(1)      --------->ANAC58          ----------->RAV1(2)        <---------ARR14(2)           <---------MYB46(3) ------GAMYB                   ------->TEIL                --------->ARR14(2)         <---------MYB52(1) -------MYB46(3)            <---------YAB1                 --------->ARR11(3)    --------->ARR14(2) -------->GT1            --------->ICU4                    <---------ARR11(3)    --------->GLK1(2) ---->SPL7               <---------ATHB51                 <---------CCA1(2)--------->GLK1(1)        < ---->HVH21         --------->ANAC58                      <---------ARR14(1)     <---------ARR14(2) - ---SPL7            --------->ANAC58                   <---------LBD16    <---------ARR11(3) <------- ------->At5g28300--------->MYB52(1)                <---------ZAT6      <---------TOE2(3) <---------YAB1   cggttaacaagttactgacaaaacgaaattatgaacctgagagagtagacactagtcttcggatcttctagactaagatatcaaatctgtttgttattag  2530800                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    =                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                -----                                                                                        --------->LBD16                                                                                       <---------ANAC46                                                                                      <---------LBD16                                           <---------------AGL15                    --------->ARR14(2)                ------->TEIL               --------------->AGL15                    <---------ARR14(2)      --------->AHL20(2)                  ----------------->AGL3                   <---------ZAT2 <--     <---------AHL20(1)                   ----------------->AGL2                   <---------At4g35610     --------->AHL20(1)       <---------ICU4                                    ------>ZmHOX2a(2) ---  --------->AHL20(2)------>MYB46(1)  --------->At4g35610          <---------ANAC58 --------->ZAT2---- ---------ARR11(3)  ------>MYB83     <---------At4g35610   ------------>CBF   --------->ARR11(3)===== -------->ARR11(3)<---------MYB59--------->ARR14(2)   <---------ALFIN1    <---------At4g35610 ------- --YAB1   <---------AHL20(2)<---------ARR11(3)      <<<<<<<ZML2   <---------ANAC58 --------->At4g35610   aagataatatatataatgaaccaaacacaaaatcatttctgctctccataactagaacacctccaatggcttcttccgatgatccagctccggagaacaa  2530900                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                             ------>NtERF2                                    ----------->RAV1(1)                                      --------                                   --------->ANAC46                                         ---------                                   <---------ETT(1)                                         <--------                                   --------->DEAR3(1)                                       ---------                                   ------->GAMYB                                           <------NtERF2                                   --------->DEAR4(1)                                      --------->ATERF1(1)                                   --------->At1g77200                                     --------->RAP2.3(1) -------->ANAC58                   --------->DREB2C(2)                                     --------->ERF1 -------->bZIP60(2)                ----------->HVH21                                      --------->ABI4(2) -------->ANAC58                  --------->DEAR3(2)                                      <---------RAP2.3(1) -------->ANAC46                  --------->MYB46(3)                                      ------>NtERF2 ==========================================MYC_MYB                                        <---------ATERF1(1) -------->O2                     ------>MYB83                                            --------->ANAC46 ---------O2                     --------->MYB52(1)                                      <---------DEAR3(1) ---------TGA1a                  ------>MYB46(1)                                         --------->DEAR3(1) -------->TGA1a                 --------->MYB55(1)                                       --------->PCF2 --->P                         --------->MYB46(3)                                       <------NtERF2 -------ALFIN1                 <---------MYB55(2)                     --------->TOE2(1) --------->RAP2.3(1) ---->GAMYB              --------->ANAC58                             --------->TOE1(1)<---------ATERF1(1) ----->MYB46(3)          --------->ANAC58        <----------DOF2     ------>ZmHOX2a(1)<---------DEAR3(1) =========MYC_MYB    --------->ANAC58         <-----------GT1  ------>ZmHOX2a(1)     <---------HSFB2a(2) -->MYB46(3)         --------->ANAC58 <---------ALFIN1------>ZmHOX2a(1)              --------->HSFB2a(2)   ccacgtctccgtcttagctagacaagctcgaaacccaccgacacattttttctttcctcacaatccttctcctcgtacttactacttctcggcgccacca  2531000   <---------AHL20(2)  --------->AHL20(2)  --------->ARR11(3) --->AtMYB61          <---------ARR11(3) ----->RAV1(1)       <---------CCA1(2)                                           --------->TOE1(3) ----ALFIN1    ----------->RAV1(1)                                         --------->TOE2(3) -->MYB46(3)   ------>NtERF2<---------ALFIN1                               --------->TOE1(3) --->RAV1(1)  <---------ETT(1)                                            --------->ZAT6 >RAP2.3(3)   --------->ANAC46     ------>ZmHOX2a(1)         <----------DOF2     --------->TOE2(3)  - -ALFIN1      ----------->HVH21 ------>ZmHOX2a(1)          ------>ZmHOX2a(1)    --------->ZAT6     <- >DEAR3(1)<---------At4g35610  <---------ALFIN1        <-----------GT1  <-----------GT1  ------->TEIL   cagatttatttcatctccgacatatatctccctcctcctccatcaatatgggtgtattatcctctttggtatattaaccctaaccctaatgtatatgagt  2531100                   <---------MYB52(1)                      ------>MYB46(1)             ------>ZmHOX2a(1)                             ------>MYB83            --------->TOE2(3)                            --------->DEAR3(1)      --------->ARR11(3)                                 ------->GAMYB      <---------ARR11(3)                                 --------->DREB2C(2)                <--------    --------->ANAC58                                     --------->MYB46(3)          <------NtERF2    --------->ANAC58                                    --------->DEAR3(2)          <------NtERF2 -------->ANAC46  --------->TOE2(3)        --------->At4g35610                      --------->LBD16 --------REM1(2) --------->ANAC46          --------->CCA1(2)                      <---------LBD16   ctacacaagaacttcctcaacgttactctccaaaccctagccaagagatgactcttccaccgactagtagtagaagagtttttggccggagaagttacga  2531200                                                                       <---------MYB52(1)           -                                                                      <-----------HVH21          ----                                                                      <-----------TGA1       --------                                                                      <---------RAP2.6(3)  --------->MYB52(1)                         --------->ANAC58                            ================================                         --------->ANAC55(2)                         ------->GAMYB         ------>MYB83                     <------ZmHOX2a(1)                              <------------AtMYB77   ------>MYB46(1)                    <----------ID1   <---------MYB52(1)     --------->bZIP60(1)          <---------MYB59              <---------bZIP60(2)    <------NtERF2          <---------bZIP60(1)--------->ANAC58 <----              <---------ANAC46      --------->LBD16         --------->ANAC46   --------->ANAC58 -----           ----------->HVH21      <---------LBD16    --------->At5g28300  <---------YAB1--------->ANAC46         ----------->GT1 --------->ANAC58           ------->GAMYB   ================================= ---GT1 --------->DAG2   <---------ANAC55(2)     --------->MYB52(1) --------->MYB46(3)<-----------GT1   actatgtgagaaggtgacatggaggacaagtatcaagccggaagttgaatccaacggtgatcacatcacaaccgtcatgcttcgcaatataccgaaccga  2531300           <---------AHL20(2)        <---------ARR14(2)     <---------ANAC46     <---------ANAC58     <---------ANAC58    <-------TEIL  ------->PIF4  <-------PIF5  <-------MYC3  ------->MYC2  <-------PIF4  <-------MYC4  ------->MYC3  ------->PIF5  <-------MYC2                                                                                  <----  ------->MYC4                                                                             <---------AHL20(2) --------->TGA1a                                                                          <---------AHL20(2) <---------O2                                                                          --------->AHL20(2) --------->O2                                                                          <---------AHL20(2) <---------TGA1a                                                                      --------->AHL20(1) ----------->OsbHLH66                                                                 <---------AHL20(1) ----->CCA1(2)                                                                    --------->AHL20(2) ->MYB46(3)--------->AHL20(2)       --------->MYB46(3)                            <---------AHL20(2) ==========MYC_MYB             --------->YAB1                     <---------AHL20(2)  --------->AHL20(2) -----ARR14(2)                <-------TEIL           <---------ARR14(2)          --------->AHL20(2) ---->ARR14(2)            <---------AHL20(2)         --------->ARR14(2)    --------->ALFIN1--------->AHL20(2) ==========MYC_MYB       --------->AHL20(2)    <-----------GT1    --------->AHL20(2)  <---------AHL20(2)   tacacgtgcgtatataattccttcattttaaattcataaccactagattatacagtatatgttagtatttaaacaaggtgtgatttaatttatttatttt  2531400  Previous    Next  AGI:  At5g07930.1    Description:  MCT2 (mei2 C-Terminal RRM only like 2); nucleic acid binding. similar to TEL2 (TERMINAL EAR1-LIKE 2), RNA binding [Arabidopsis thaliana] (TAIR:AT1G67770.1); similar to terminal ear1 [Zea mays] (GB:NP_001104903.1); contains InterPro domain RNA recognition motif 2 (InterPro:IPR007201); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504) Range:  from: 2530866    to: 2532217    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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