Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ---------->DOF2                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                --------------->AGL15                                                                <---------------AGL15                                                                <----------DOF2                                                                --------->TOE2(3)                                                               <-----------------AGL3                                                               ----------------->AGL2                                                              <---------YAB1                                                            <---------CCA1(2)                    ----                                                          <---------ANAC58           --------->ALFIN1 --------AHL20(2)                    ----------->GT1      <---------ANAC58     ---------->DOF2------- -------AHL20(2)                  <---------ANAC46        <---------ANAC46 ----------->GT1   --------   tttaatgacatctcttcatatgcagagattgtttttatgtggaaacacatagactaaatggcttatctttaaatagaaagtaaaagagtggaagtgaaag  2399100                                      <---------YAB1                                   <---------YAB1                                 --------->YAB1                                --------->AHL20(2)                                <---------AHL20(2)                      <---------AHL20(2)                      --------->AHL20(2)   ----------->GT1   <---------AHL20(2) ---------->DOF2     --------->AHL20(2)                                                           --- ------>DOF2         <---------AHL20(1)                                       ----------->GT1-------- ----------------->ANAC81   ---------->ID1                    ----------->GT1 <---------ANAC46  <---- -->DOF2             --------->AHL20(1)       <---------GLK1(2)    --------->ICU4        <-----------TGA1   aaagaaagaaaaaaaaaaaccaatttatttgtcatttattattctacagaatggcagaatgactatgtaaaaatttgattctgtgaaatttcgtcattat  2399200               <---------YAB1             --------->YAB1             --------->AHL20(2)            --------->ICU4          <---------ICU4          <--------ATHB1          --------->YAB1          --------->ATHB51                <------------ATHB5                       <---------MYB52(1)         <---------ATHB12                 <---------ICU4                          <-------GAMYB         <---------ATHB51                 <--------ATHB1                --------->DAG2         --------->AHL20(2)               --------->YAB1               ---------->DOF2 ------>YAB1<---------YAB1                --------->ATHB51          --------->AHL20(2)   --------->GLK1(2) ->ICU4  --------->ICU4                  <---------ATHB51     ----------->GT1    <---------ANAC46 -----YAB1<--------HAHB4   --------->YAB1--------->ICU4     ---------->DOF2    <---------ZAT18  -----   gcataataccaataattataaatagcgaataaaaacaaaaacaataatgggatgtttagcaaaaaagaaataaaaaagcagtgccgttgagaatcaaatg  2399300                         <----------ID1                       ---------->DOF2                   ----------->GT1                                                     ----------->GT1                  <---------TOE2(3)                                                  ---------->DOF2                ---------->DOF2                                            ----------->GT1  ---------           --------->At4g35610                           <-------TEIL     ------------------------>ANAC81 ------>GT1<---------At4g35610              --------->YAB1    --------->TOE2(3)  ---------->DOF2   gtttttagtagtcagcatcaaaggtaaaagacaagttgagcataaatcatatgagaagattcatcgttagaaccaaaatgtaaaaaagaaagaaaaaagc  2399400                                                                    ------>ZmHOX2a(1)                                                                    <----------DOF2                                         --------->ANAC46       --------->ARR11(3)                                <-----------HVH21              --------->HSFB2a(1)                             <---------bZIP60(2)               --------->HSFC1(2)                             <---------ANAC46        <---------ANAC58                           <---------ZAT14           <---------ANAC58                           --------->ZAT14    --------->MYB46(3)<---------ARR11(3)                        <---------ZAT6   --------->ANAC58      <---------HSFC1(2)                      <---------ANAC46   --------->ANAC58      <------MYB83--------->DAG2                    --------->ZAT18 --------->bZIP60(2)        <------MYB46(1)     <---------YAB1 <---------ZAT14 --------->O2     <---------ANAC46     ---------->DOF2  <----------DOF2   --------->ZAT14 <---------bZIP60(1)        <---------HSFB2a(1) ->DOF2          <---------ANAC46   --------->bZIP60(1)       --------->MYB59                  ------   ttagcttttgattacagttttgtgcagtgtgaagtgtcacatcacacaacaacttgggtgaaggaaggtcctttcaaaaagttggacgttgtcttcataa  2399500        <---------WOX13(1)      <---------AHL20(2)                                                             --------->ANAC46      --------->ATHB12                                                              --------->SPL7     --------->ICU4            <---------CCA1(2)                   <---------DAG2   ------>MYB83     <---------AHL20(2)      <---------ALFIN1                --------->TOE1(3)      ------>MYB46(1)--     *TSS            <---------ICU4                          --------->TOE2(3)      -------->P     <-     --------->AHL20(2)----------->HVH21             ----------->RAV1(1)           <---------ALFIN1-- --->AHL20(2)        --------->YAB1                 <----------ID1 <----------DOF2<---------MYB111(1)   atttgtattaattgatcacagactcatgaccccatctctaaaaccactaagagagcgacaaaaccatagctttttttttgtgtccctaccccatccatgg  2399600           <---------YAB1     --------->ARR11(3)     <---------ARR11(3)                                                                  <---------ICU4 --------->GT1 <-----------GT1    ------>ZmHOX2a(1) --------->AHL20(2)               xxxxxxxxxxxxxxxx --------At4g35610            ------>ZmHOX2a(1)  <----------DOF2              <----------DOF2 ------->At4g35610       ---------->ID1  <----------DOF2                <---------ALFIN1 --------->YAB1   ctgctaaaatcttgtgattaccttcttgtctccttcctcttctctttccctcttttatataagaaccaaaacatccacagcttttgttccatcatcactt  2399700                ----------->GT1                <---------ANAC46     <----------DOF2       <---------ANAC58  --------->GLK1(2)        <---------ANAC58                                                       <-- <---------ARR14(2)        <---------ANAC46                                             <---------MYB46(3) <---------GLK1(2)    <---------ICU4   ---------->DOF2                                  <------MYB46(1) --------->ARR14(2)  --------->ICU4   <------ZmHOX2a(1)                               <--------P <--- >smallRNA(i)<----------DOF2        <---------TOE2(3)                 <---------CCA1(2) <------MYB83   gcagattctttctctctttcgtaaaaatggcgagttttgaggaaagctctgatttggaagctatacagagccatctcttagaagacttgttggtttgtga  2399800                                                                           --------->ANAC58                                                                     ------>ZmHOX2a(1)                                                                    <---------------AGL15                                                                   ----------------->AGL3                                                                <-------MYC3                                                                <-------MYC2                                                                ------->MYC3                                                                ------->MYC2  ------->TEIL                                                               --------->ANAC58                                                               --------->ANAC46    <---------GLK1(2)                         <---------HSFC1(2)                  <---------ALFIN1 --------->GLK1(2)            --------->GLK1(2)                              --------->AtMYB61 <---------ARR14(2)           <---------ARR11(3)            <------ZmHOX2a(1)--------->MYB46(3) --------->ARR14(2)     -           --------->ARR11(3) <----------DOF2    <---------ANAC46  ----------------->AGL1   --------- -------MYB46(3)         --------->HSFB2a(1)   <---------ANAC46--------->ANAC58----------->RAV1(2)  < ------AtMYB61           --------->HSFC1(2) <----------DOF2<---------ALFIN1--------->ANAC58 <--------   tggtttcatgggagattttgacttcgatgcttcttttgtctcaggactttggtgtatagaaccacacgttcctaaacaagaacctgattctccagttctt  2399900                                                       <---------ICU4                                                       --------->YAB1                                                      <---------YAB1                                                    <---------ICU4                                                    --------->YAB1                                                   <---------YAB1              <---------WRKY12                   <---------ICU4              <---------WRKY45                   --------->YAB1    <---------GLK1(2)          --------->ALFIN1 <---------YAB1    <---------ARR14(2) <---------ANAC58       <---------ICU4    --------->ARR14(2) <---------ANAC58       --------->YAB1  --------->LBD16    <---------ARR11(3)      <---------YAB1                  <-----------TGA1 ----->ZmHOX2a(2)    --------->ARR11(3)    <---------ICU4        --------->At4g35610 >ARR14(2)    <---------WRKY38(1)          --------->YAB1        <---------At4g35610 ---------LBD16<---------DOF5.7(2)        --------->ICU4         <---------ZAT2 -ARR14(2)   --------->DOF5.7(2)         <---------KAN4(2)       --------->ZAT2    ----------->RAV1(1)   gatccggattctttcgtcaacgagttcttgcaagtggaaggggaatcatcatcatcatcatcaccagagctgaattcatcgtcatcaacatatgagactg  2400000  Previous    Next  AGI:  At5g07580.1    Description:  DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor ERF106 (ERF106) [Arabidopsis Thaliana] (GB:Q9LY05); similar to AP2 domain-containing transcription factor family protein [Arabidopsis thaliana] (TAIR:AT5G61590.1); similar to AP2 transcription factor [Arabidopsis arenosa] (GB:AAR15499.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 2399505    to: 2400602    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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