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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-------
GAMYB
<---------
ANAC46
<---------
DEAR3(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
RAP2.3(1)
<---------
RRTF1(1)
<---------
ATERF1(1)
------>
NtERF2
<---------
DEAR4(2)
<---------
ORA47(2)
<---------
ERF1
<---------
RAP2.3(3)
--------->
DEAR3(1)
<---------
RAP2.3(2)
<---------
RRTF1(3)
<---------
DEAR3(1)
--------->
ATERF1(1)
<---------
ABI4(1)
--------->
At4g35610
<------
NtERF2
<---------
At4g35610
<---------
ATERF1(1)
--------->
CCA1(2)
--------->
LBD16
<---------
DEAR4(2)
--------->
HSFB2a(2)
--------->
ARR14(2)
<---------
ANAC46
<---------
ORA47(2)
<---------
HSFB2a(2)
<-----------
RAV1(1)
<---------
LBD16
<---------
RAP2.3(1)
<---------
LBD16
--------->
ICU4
--------
DOF2
<---------
RAP2.3(2)
--------->
ARR14(2)
----------------------
----->
GT1
--------->
TOE1(2)
--------->
ANAC58
<---------
RAP2.6(3)
<
-
MYB46(1)
--------->
ANAC58
<---------
RAP2.3(3)
--------->
ANAC58
<-----------
TGA1
<---
-
MYB83
--------->
ANAC58
<---------
DEAR3(1)
--------->
ETT(2)
<------
ZmHOX2a(1)
<---------
ARR14(2)
ttttacggagatgagctcgtaatcgaacgaagacggcggcgttgaagctatgtcgaaaggaacttctggaggagttagagtcgtcatgttggatatggat
1918800
<------
NtERF2
------>
NtERF2
<---------
RRTF1(1)
<---------
ERF1
<---------
RAP2.3(1)
<---------
bZIP60(1)
<---------
O2
<---------
DEAR3(1)
<---------
ATERF1(2)
<---------
RRTF1(3)
<---------
RAP2.3(3)
<---------
RAP2.3(2)
--------->
ATERF1(1)
<------
NtERF2
--------->
ATERF1(2)
--------->
LBD16
<---------
RAP2.6(2)
<---------
DEAR3(1)
<---------
RRTF1(2)
<---------
ANAC46
----------->
HVH21
<---------
LBD16
--------->
DEAR3(1)
--------->
ARR14(2)
<-
<---------
DEAR3(1)
<------
NtERF2
<---------
ARR14(2)
<--
--------->
ANAC46
<---------
LBD16
<---------
LBD16
<------
--------->
SPL7
<------
NtERF2
<---------
ANAC46
<------
MYB46(1)
<----------
->
TaNAC69(2)
<---------
DEAR3(1)
--------->
ARR14(2)
<------------------------
ANAC81
<-----
---------
SPL7
--------->
ATERF1(1)
<---------
GLK1(2)
<----------
DOF2
--------->
MYB52(2)
----
---------------
SPL14
--------->
LBD16
<------
NtERF2
<<<<<<<<<
TBF1
<------
MYB83
*
TSS
<--------
tttgtacggcggagttgagtcgccggagattgtgacggcggaatctccat
agtctttcttcttctttttttttgtttggtttgtttgt
gagtttgtggct
1918900
--------->
ARR11(3)
<---------
ICU4
-------->
ATHB1
--------->
ATHB12
--------->
ATHB51
<--------
ATHB1
--------->
ICU4
<<<<<<<<<<
AGL22
<---------
ATHB51
<---------
ATHB12
<<<<<<<<<<
AGL24
<---------
ANAC46
<<<<<<<<<<
AGL20
--------->
ICU4
<---------
ANAC58
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
--------
WOX13(1)
<------
ZmHOX2a(1)
------>
ZmHOX2a(2)
<---------
AHL20(2)
----------
CBF
========================
HOX2a_HOX2a
--------->
AHL20(2)
---
At4g35610
============================
HOX2a_HOX2a
<-----------
RAV1(1)
-
-
RAV1(1)
<---------
ANAC58
<------
ZmHOX2a(1)
<---------
ARR11(3)
<-----------
GT1
--------->
ICU4
<
----
ANAC46
<---------
TOE2(3)
<------------
CBF
------->
TEIL
<---------
ARR11(3)
-
----->
ATHB12
<---------
TOE2(3)
------------>
ATHB5
<-------
TEIL
--------->
ARR11(3)
-------
-
RAP2.6(2)
---------->
DOF2
------------>
CBF
<---------
YAB1
---------->
ID1
----------->
GT1
--
gattgggttttgcgagtgtttaaagtaaggaaggaggtccaattattgatctctatgatatgtacatttgtcactatcttgtgttgtattaattagtaaa
1919000
<---------
WOX13(1)
--------->
ATHB12
--------->
ICU4
<---------
YAB1
--------->
YAB1
<---------
YAB1
<--------
HAHB4
<---------
ICU4
<----------
DOF2
--------->
ATHB51
--------->
DOF5.7(2)
-------->
HAHB4
<-------
TEIL
<---------
AHL20(2)
<---------
YAB1
--------->
CCA1(2)
-------->
ATHB1
<---------
YAB1
--------->
ARR14(1)
--------->
YAB1
--------->
ATHB12
-------->
ARR14(2)
<---------
ATHB51
<-----------
GT1
--------->
ICU4
---------
ARR14(2)
--------->
ICU4
--------->
ANAC58
<---------
WOX13(1)
-------->
ARR11(1)
<---------
YAB1
--------->
ANAC58
<------
ZmHOX2a(1)
--->
DOF2
<---------
DAG2
--------->
TOE2(3)
--------->
ARR11(3)
<---------
TOE1(3)
<
------->
CCA1(2)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
TOE2(3)
-
gagatacgtttactttatttgtattttcttaattattatgattggaatggaagatagtaggcaaattacaaaatttaaggattgattactatttttgatg
1919100
------->
GAMYB
<---------
MYB55(2)
--------->
MYB46(3)
<---------
ARR11(3)
-------->
P
--------->
YAB1
------>
MYB83
<---------
YAB1
------>
MYB46(1)
--------->
YAB1
--------
<---------
GLK1(1)
<---------
ICU4
<---------
LBD16
<---------
LBD16
--------->
ICU4
<---------
SPL7
--------->
AHL20(1)
<---------
AHL20(2)
<---------
ALFIN1
<---------
AHL20(1)
--------->
AHL20(2)
--------->
YAB1
<---------
ANAC58
<---------
AHL20(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
AHL20(2)
--------->
TOE2(3)
--------->
AHL20(2)
<---------
YAB1
<---------
ANAC58
----------->
GT1
--------->
GLK1(1)
--------->
ARR11(3)
--------->
YAB1
<------
NtERF2
---------
YAB1
<---------
ARR11(3)
------>
MYB46(1)
<---------
YAB1
<---------
YAB1
--------->
ALFIN1
-------->
ICU4
--------->
ARR11(3)
------>
MYB83
<---------
GLK1(2)
---------->
DOF2
<---------
REM1(2)
<----
tgaagattagatggaaatatattcggaaatccaaccagcctaaaaatagattttgatttaattatcaaagtatgatcatcaacacggtgtcgttccggtt
1919200
--------->
KAN4(2)
<---------
HSFC1(2)
<----------
DOF2
--------->
ANAC46
--------->
HSFC1(2)
<---------
At4g35610
--------->
ANAC58
-
<---------
KAN4(1)
--------->
At4g35610
---------->
ID1
--
--------->
KAN4(1)
--------->
HSFB2a(2)
<---------
CCA1(2)
--
--------->
HSFB2a(1)
<---------
HSFB2a(2)
<---------
GLK1(2)
<------
<---------
HSFB2a(1)
<---------
ARR11(3)
<---------
ARR14(2)
<---------
ALFIN1
->
LBD16
<----------
DOF2
--------->
GLK1(2)
<------
MYB46(1)
<-------
TEIL
--------->
ANAC58
<---
---
TEIL
*
TSS
--------->
ARR11(3)
<------
MYB83
--------->
ARR14(2)
----------->
HVH21
catcgaacattcc
acttctttcttcttgtctgaaaaatctagaagagcagctatttggtttctctatccgattcgtctctctcacgccctcacgtttatc
1919300
--------->
YAB1
------>
MYB83
<---------
ATHB12
--------->
ANAC46
--------->
MYB46(3)
<---------
MYB59
<-----------
GT1
------>
ZmHOX2a(1)
<---------------
AGL15
--------->
TOE2(3)
<----------
DOF2
------>
MYB46(1)
-------->
AtMYB61
--------->
ARR11(3)
------>
MYB83
<------
NtERF2
------->
ANAC46
------>
MYB46(1)
--------->
ANAC55(2)
<---------
ANAC46
------->
bZIP60(2)
<---------
ARR11(3)
--------->
WOX13(1)
<---------
ANAC58
-----
GT1
>>>>>>>>>>
MYB80
--------------->
AGL15
<-----------
HVH21
------
ALFIN1
--------->
AtMYB61
<---------
ANAC55(2)
<---------
ZAT14
<---------
ANAC58
cacctcatcctcaaaccaaaccacaagacctcttttttaagtaaccaatcacagagagatagagagagagaacagagtca
atgtcaatggcgtctatagc
1919400
--------->
ANAC58
--------->
ANAC46
------>
MYB83
------>
MYB46(1)
--------->
AtMYB61
<----------
DOF2
<---------
MYB111(2)
------>
MYB83
--------->
DEAR3(1)
------>
MYB46(1)
<---------
ALFIN1
-------->
P
--------->
LBD16
--------->
MYB46(3)
<<<<<<<<<
TBF1
------>
ZmHOX2a(1)
--------->
YAB1
<<<<<<<<<
TBF1
------>
ZmHOX2a(1)
<---------
CCA1(2)
<---------
LBD16
<<<<<<<<<
TBF1
--------->
ANAC58
--------->
STY1(1)
<----------
DOF2
<---------
CCA1(2)
ttcttcttcttccaccaccctactctcttcctctagggttcttcttccctccaagtcttctcttttatctcctaccgtctctttccccagaatcataccc
1919500
--------->
ANAC58
--------->
O2
<---------
O2
<---------
TGA1a
--------->
ANAC46
----------->
HVH21
--------->
ANAC46
------>
NtERF2
--------->
LBD16
<---------
ALFIN1
======================
MYC_MYB
------->
GAMYB
<------------
AtMYB77
--------->
MYB46(3)
<------
NtERF2
=======================
MYC_MYB
------>
MYB46(1)
--------->
HSFB2a(1)
------>
MYB83
--------->
TGA1a
<----------
-------->
P
<-----------
HVH21
<---------
RAP2.6(3)
========================
MYC_MYB
--------->
MYB55(1)
--------->
HSFC1(2)
--------->
MYB52(1)
<---------
HSFB2a(1)
--------->
DEAR3(1)
<---------
HSFC1(2)
--------->
AtMYB61
--------->
ARR14(2)
<---------
MYB111(2)
<---------
ARR14(2)
<---------
MYB55(2)
<-----------
ARR10
--------->
ARR14(2)
<---------
ALFIN1
--------->
ANAC58
--------->
WRKY18(1)
--------->
LBD16
<---------
MYB46(2)
<------
NtERF2
<---------
ANAC46
<---------
MYB111(1)
--------->
LBD16
------>
ZmHOX2a(1)
<---------
GLK1(2)
--------->
MYB46(3)
--------->
RAP2.6(2)
<-
<------
NtERF2
<---------
ANAC58
--------->
MYB46(3)
<---------
LBD16
<--------
--------->
ANAC46
<---------
ANAC55(1)
--------->
MYB46(3)
<---------
ALFIN1
------>
NtERF2
<---------
LBD16
<---------
ANAC58
<---------
ARR14(2)
--------->
DEAR3(1)
--------->
DEAR3(1)
------>
ZmHOX2a(1)
<---------
LBD16
--------->
ARR14(2)
<---------
ATERF1(1)
--------->
RAP2.3(3)
tcttcctcggcatcatcctcttctctctgttccgggttctccagtctcggttccctcaccaccaaccgctccgcctcacgccggaacttcgccgtcaagg
1919600
<-------
--------
--------->
ANAC58
<---------
WOX13(1)
--------->
YAB1
--------->
ANAC58
<---------
YAB1
----------->
GT1
--------->
ANAC46
>>>>>>>>>
ARR1
<---------
ANAC58
--------->
WRKY38(1)
<---------
ANAC46
>>>>>>>>>
ARR2
--------->
MYB52(2)
--------->
WRKY12
<---------
ANAC58
--------->
YAB1
<---------
MYB52(1)
<
-
HVH21
--------->
At4g35610
<---------
ANAC58
--------->
ATHB12
--------->
DOF5.7(2)
----------
RAV1(2)
--------->
AHL20(2)
<---------
YAB1
--------->
TOE2(3)
-
-
WRKY12
<---------
At4g35610
--------->
ARR11(3)
<---------
YAB1
<---------
MYB46(3)
<---------
ANAC58
ctcaggct
gtaagttgactcgcaatgccataaatttcttgtatttgctccatcttctcattcactatgattgttgtatgaattcgttagcttgttataat
1919700
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AGI:
At5g06280.1
Description:
similar to hypothetical protein [Vitis vinifera] (GB:CAN67410.1)
Range:
from: 1917642
to: 1918888
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At5g06290.1
Description:
2-cys peroxiredoxin, chloroplast, putative. Identical to 2-Cys peroxiredoxin BAS1-like, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9C5R8;GB:Q9FED5;GB:Q9FNH9); similar to 2-cys peroxiredoxin, chloroplast (BAS1) [Arabidopsis thaliana] (TAIR:AT3G11630.1); similar to 2-Cys peroxiredoxin [Brassica napus] (GB:AAG30570.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thioredoxin fold (InterPro:IPR012335)
Range:
from: 1919214
to: 1921426
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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