Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <------MYB83                                                                    <------MYB46(1)                                                                   --------->MYB59                                                               <---------AHL20(2)                      <---------ICU4                           --------->AHL20(2)           ---------                     --------->ICU4                           --------->AHL20(2)<--------ATHB1         --------------->AGL15--------------->AtSPL8<---------MYB46(3)          --------->ATHB12 ---------DOF2       <---------YAB1              ------------>MYB.PH3(2)       <---------YAB1<------- ----ZAT18         --------->YAB1         <-------TEIL <-----------GT1         --------->ICU4-------- --->ZAT18<---------YAB1      <---------------AtSPL8--------->MYB52(2)         <---------ATHB12  ----   gctttacatttcattatagagtcataatggaatatgtacaaatatacatctagtttgttactcatttatttggtagagacaatgatttgaagaaatatat  1887900       ---------->DOF2                                                                     <---------ICU4 >AHL20(2)                                                           --------->ATHB12    <---------ANAC55(2) --AHL20(1)                                             <-----------GT1       <---------DAG2 ->AHL20(1) --------->GLK1(2)                   <-----------GT1     ------>ZmHOX2a(2)    --------->ANAC55(2) ----->ARR11(3)   ------->TEIL             --------->ICU4       <---------YAB1<----------DOF2   atcatgttctaaagaatttgaatctgatcatataagtagagaataatttttaacaaaatttccattttgatcgattggaactttttgggttacttatttc  1888000                                                                <------MYB83                                                                <---------MYB46(3)                                                                <------MYB46(1)                                                              <---------MYB52(1)                                                         --------->GLK1(2)              ------>NtERF2                                                         --------->ARR14(2)            <---------ATERF1(2)                                                         <---------ARR14(2)           <---------ANAC58              <---------ZAT6                        --------->ORA47(1)               --------->At4g35610        ------>ZmHOX2a(2)                  --------->GLK1(2)<-----------RAV1(1)<---------AHL20(1)   <       <------ZmHOX2a(2)              ---------->DOF2   --------->WOX13(1)     --------->AHL20(2)   -      <---------ARR11(3)        <---------ANAC46   --------->DEAR3(1)          <---------AHL20(2)   -      --------->ARR11(3)      <---------MYB46(3)  --------->DEAR3(2)   <----------DOF2<---------ANAC58  <-----------GT1          <-----------RAV1(1)  <-----------GT1<---------AtMYB61<---------AHL20(2) --   gatgttacgatctctagtgttccaaacttctgtggtttgtaaaagaatttgaaccggccaatctgttggtttactttgtaattaatttgctggctgatgt  1888100                  <---------ANAC46                  <---------ANAC55(2)                  --------->ANAC55(2)         <---------GLK1(2)     ---------->DOF2       ----------->GT1                               --------->ZAT18 ------>ZmHOX2a(1)----------->GT1                                        <---------ZAT18 ---------------AGL15      <------MYB46(1)      ----------->GT1          <-------TEIL              -- -------->TOE2(3)<---------TOE2(3)    <---------DEAR3(2)         --------->At4g35610               <- -------------->AGL15      <------MYB83 <---------MYB52(1) <---------TOE1(3)             --------->LBD16 --------------->AGL3     --------->MYB59  <---------ANAC46<---------TOE2(3)           <---------LBD16   ttcctaaaaaagattgtttgacgtaaatttggtaaattgtcggttttgtggagaaaaatataaggtttgctcaagtacacatcgactaaaccggagaaca  1888200                                          --------->YAB1                                          <---------ICU4                                         --------->ICU4                                         <---------YAB1                                       --------->YAB1                                       <---------ICU4                                      --------->AHL20(2)                --------->TOE2(3)                                      <---------AHL20(2)              ------->TEIL                                      <---------ATHB51               ------>MYB83                                      --------->ICU4               <---------MYB59   --------->HSFB2a(2)                                   <---------AHL20(2)             --------------->AtSPL8            ------------>CBF      --------->AHL20(2)          ------>ZmHOX2a(1)  <---------TGA1a           <-----------GT1     --------->WOX13(1)            --------->TOE2(3)   --------->O2  <---------DAG2             ------------>CBF             --------->ARR14(2)     <---------O2       -  <----------DOF2           --------->ANAC58             ------>MYB83------>MYB46(1) <---------HSFB2a(2) ------->ARR11(3)           --------->ANAC58<---------YAB1<---------ARR14(2)     --------->TGA1a    - --------ARR11(3) ----------->GT1 <---------AHL20(2)     ------>MYB46(1)--------->TOE1(3)          --   agagcttttttagttacaatcggataaaccgagcaattaaataattatcactgtgaaccaaatcctaaaccgaaccttataagacgtctcgaatagatta  1888300                                            <------ZmHOX2a(2)                                           --------->ARR14(2)                                     --------->ZAT2                                     --------->At4g35610            *TSS                     <---------At4g35610                                            <            <---------At4g35610      <---------ZAT2                                               ---            --------->At4g35610    --------->ZAT14                                           <-------        --------->At5g28300        <---------ZAT14                                <---------At4g35610     <---------------------WRI1  --------->ANAC46                        ---------->DOF2     <-------   ----------->HVH21          <---------ZAT14    ------>NtERF2  --------->LBD16   --------->At4g35610 -------->TOE2(2)             --------->ZAT18   --------->DEAR3(1)     <---------ZAT6  <---------TOE1(3) -------->TOE1(2)             --------->ZAT14<---------DEAR3(1)<---------LBD16   ------->TEIL<------- --------->RAV1(2)            <---------ZAT18------>ZmHOX2a(2)<---------LBD16 <---------REM1(1)<-----   aacctgcgacggtaagctcaagagaggctgagtacactgagctgcgatcggcgactgtctcttgtccgggatagtgaaagatgaagctgaaggttgtgta  1888400                                                                        --------->ANAC46                                                                        --------->TGA1a                                                                        <---------TGA1a                                                                        <---------O2  <------NtERF2                                                                        --------->O2 --------->RAP2.3(3)                                                                        --------->bZIP60(1)                                                               <------ZmHOX2a(2)     --------->RAP2.3(2)     <---------GLK1(1)                                         =============HOX2a_HOX2a        <-----    --------->ARR11(3)                                        --------->ARR14(2)     --------->DEAR3(1)    <---------ARR11(3)                                        <---------GLK1(2)      --------->RAP2.6(2) --------->SPL7                                               <---------ARR14(2)     --------->RRTF1(2) ---------MYB52(1)             ---------->DOF2              --------->LBD16----------->GT1     <----- ------>YAB1                ------>ZmHOX2a(2)              --------->HSFB2a(2)      <---------LBD16 --ANAC58                  <------ZmHOX2a(2)               <---------HSFB2a(2)    --------->ANAC46 --ANAC58                 <---------ARR14(2)      --------->REM1(1)   <---------ALFIN1------>NtERF2 --ANAC46                 --------->ARR14(2)   --------->TOE2(3)     ------>ZmHOX2a(1)--------->LBD16 ----CCA1(2)         <---------MYB52(1)        --------->TOE1(3)  ------>ZmHOX2a(1) --------->RAP2.3(1)   tcgtaaggtctccgattacatctgttacgatctgaaagaaatcgtcttaccttcatcacttcccgatcctcctcacgtcgttaaacgccgcaaattgact  1888500                                                                                             --------                                                                                      --------->LBD16                                                                                      <---------LBD16                                                                                    ------>ZmHOX2a(2)                                                                                    =================                                                                                   ==================                                                                                  --------->ARR14(2)                                                                                  <---------ARR11(3)         --------->ARR14(2)                                                       <---------ARR14(3)         <---------ARR14(2)                                                       --------->ARR14(3)   <-------PIF5                                                 <--------P        <-----------ARR10   <-------MYC2                                                <---------MYB52(1) --------->GLK1(2)   ------->PIF5                                               --------->LBD16     --------->ARR11(3)   ------->MYC2      <----------DOF2                         --------->HSFB2a(2)  <---------AGP1   ------->MYC3    --------->At4g35610          <---------AHL20(2)                <---------ARR14(2)   <-------MYC3    <---------At4g35610         <---------AHL20(2)--------->MYB52(2)<------ZmHOX2a(2) ----ANAC58   --------->O2                 <----------DOF2   <---------HSFB2a(2) <------ZmHOX2a(1) ----ANAC58  ------>ZmHOX2a(1)           ------>ZmHOX2a(1)  <---------LBD16     ----------->ARR10   tggcacgagcgattcctcgtgagctttccttcactctctcttcctcttttttatttgaattttccggtagttttctattgagaggatctggggaatcaaa  1888600                                                <XXXXXXXXXXXXXXXXXXXXMIR1887                                               <---------ANAC58                                    <---------ZAT14         <---------AHL20(2)                 ---------->DOF2    --------->ZAT14   --------------->AGL15          <------ZmHOX2a(1)         --------->ZAT18   <---------------AGL15   <----------DOF2               <---------ANAC58     <----------DOF2 ->YAB1  <----------ID1          <---------ANAC46   <---------ZAT18                           ------- ================HOX2a_HOX2a     <---------ANAC58   --------->ZAT18              <---------ZAT6     - ================HOX2a_HOX2a   <-----------GT1 <---------ANAC58        ---------->ID1        <-------   attttctttcaaggacaaacaaagttcgcattttttcgtgctctgattttcttgtgctctatttagtttttttgtccaatttagagtgaatgtgttctcg  1888700           --------->YAB1     <----------DOF2  --------->ARR11(3)                   <---------HSFB2a(2)  <---------ARR11(3)                   --------->HSFB2a(2)                                  --------- <------MYB83--------->At4g35610    --------->ARR14(2)                      --------->GLK1(2) <------MYB46(1)                    --------->GLK1(2)                       <---------ARR11(3) -->HSFB2a(2)<---------At4g35610    <---------ARR14(2)                      --------->ARR11(3) -------->MYB59                    <---------GLK1(2)                        --------->ARR14(2) ----------AGL1          <---------At4g35610 --------->ALFIN1   ------->TEIL<---------ARR14(2)   attaggtctttaatcagcagatgtttgagatgatacagaatctggaagtgtgtgatttcatttatgtatattgtggaatatctgaaacacaaatgtgaca  1888800  Previous    Next  AGI:  At5g06240.1    Description:  EMB2735 (EMBRYO DEFECTIVE 2735). similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAS75234.1) Range:  from: 1888312    to: 1889699    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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