AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                    <----------DOF2                                                <
   ------->GAMYB              <---------ALFIN1     <----------DOF2                                 <
  <---------MYB52(2)        ----------->RAV1(1)<---------CCA1(2)                      --------->YAB1
  --------->MYB46(3)        <---------ALFIN1<------NtERF2<-----------GT1              --------->AHL20(2)
----->WOX13(1)           --------->PCF2  ---------->ID1 <-----------GT1        ------>ZmHOX2a(1)  --
 
aatcaacaaacactctgtgatactcaggctcccacactgcttttggcctcatttcttttttaacttctgttctccaaaactcctaacaattaaaaacgat  1744800
          <---------ZAT18
          --------->ZAT18                                                  <---------HSFB2a(2)
          --------->ZAT14                                          ----------->RAV1(1)
    --------->YAB1                                                 ------>MYB83
    --------->ATHB12                                               ------>MYB46(1)
    <---------ICU4                                              --------->ANAC46             -------
   <---------YAB1                                          --------->TOE1(3)  <---------ARR11(3)
----------DOF2                                             --------->TOE2(3)  --------->ARR11(3)
---------DAG2             ---------->DOF2                 <---------ICU4   --------->HSFB2a(2)
------->TOE2(3)       <-----------GT1               <---------AtLEC2 <---------ATHB12       <-------
 
acctttatcattgtgaactcgtttttaacaaaagcacagagagacagagacatttgcataaacattaacccaacaattctagatattgaacacaaatcat  1744900
                                   <---------ANAC58
                                   <---------ANAC46
                                   <---------ANAC55(2)
                                   <---------ANAC58--------->LBD16
                           --------->RAP2.6(2)    <---------LBD16
                           --------->ANAC46      <-----------RAV1(2)    ----------->RAV1(2)
   --------->ANAC58        --------->ANAC58      <---------LBD16        --------->O2
   --------->ANAC58        --------->ANAC58<-------MYC3                 <---------O2
   --------->ANAC46     --------->DEAR3(1) ------->MYC3                 <---------ZAT2
-->YAB1              --------->ANAC58     --------->ANAC55(2)  --------->ARR11(3)
--ATHB12             --------->ANAC58     <---------ANAC55(1)<---------YAB1
 
ataaacaaggcattgaaccagagaacgcagacgcaattacttgaaacgtgtttcagggaaaaatatgattttgcgacctgagacttcgcctacttcaaaa  1745000
                                                                                                   -
                                                                                                  <-
                                                                                                 <--
                                                                                                 <--
                                                                                                 ---
                                                                                                <---
                                                                                                ----
                                                                                                <---
                                                                                                <---
                                                                                                <---
                                                                                               <----
                                                                                               -----
                                                                                               <----
               --------->ANAC58                                                                -----
               --------->ANAC58                                                                <----
               --------->ANAC46                                                               ------
           ------>MYB83                                                                       <-----
           ------>MYB46(1)         --------->ANAC46                                    <------ZmHOX2a(1)
         ------->GAMYB             --------->ANAC58                       <---------YAB1     <------
         <---------MYB59           --------->ANAC58     <---------LBD16--------->TOE1(2) <---------GLK1(1)
      --------->MYB52(1)----------->GT1  --------->TOE2(3)             --------->TOE2(2) --------->GLK1(1)
      <-----------GT1 ----------->GT1    --------->TOE1(3)      ----------->GT1  <---------MYB46(3)-
 
tcccagtagtaaccgaacacgaaaatggggaaaattgcacgaaaccctaactcgattaatcgggagactgaaaaactacgatagtggttaggatttcgcc  1745100
<------NtERF2
----->NtERF2
--------ANAC46
----NtERF2 --------->ZAT2
-------LBD16                                                                             <---------ANAC58
------>ATERF1(1)                                                                         <---------ANAC58
------ATERF1(1)                                                                          <---------ANAC46
-->NtERF2  --------->At4g35610                       ----------->RAV1(1)              --------->ALFIN1
------DEAR4(2)                                      ----------->HVH21                 <---------RAP2.6(2)
------ERF1 <---------ZAT2              <---------At4g35610                          --------->ALFIN1
------RAP2.3(1)                       <---------ARR14(2)                            <-----------RAV1(1)
-----RAP2.3(2)                        --------->ARR14(2)                        <---------O2
---->ATERF1(2)                        --------->GLK1(2)         <---------ANAC58<---------ANAC58
-----DEAR3(1)                        <---------GLK1(1)          <---------ANAC58====================
---->DEAR3(1)                     --------->LBD16   --------->ANAC46            <---------TGA1a
-----ATERF1(2)                   <---------LBD16  --------->ANAC58              <---------ANAC46
--->ATERF1(1)                   <---------LBD16--------->ARR14(2)               <---------bZIP60(2)
----LBD16  <---------At4g35610 <---------DOF5.7(2)--------->ANAC58           ----------->HVH21
---RAP2.3(1)                 --------->DOF5.7(2)  --------->ANAC46          <-----------HVH21
-------->LBD16      ----------->GT1  --------->GLK1(1)         --------->ATHB12 <---------ANAC58
 
ggcgggaattgggaagctgaagaagggaaaacgttaccgggaatctgatggaaacgcgacagcgattgagtggccactctgtgacgggtgtggctggaag  1745200
                                                         --------->HSFB2a(1)
                                                         --------->GLK1(1)
                                                        <---------GLK1(2)
                                                  <---------ZAT14
                                                  --------->ZAT14
                                                  <---------SPL7
                                                <---------------AtSPL3
                                               <------------------SPL14
                                             <------NtERF2
                                             *TSS<----------DOF2
                                             ------>NtERF2
                                           <------NtERF2--------->ARR14(2)
                                           <---------DEAR3(1)
                                           --------->ATERF1(1)
                ------>ZmHOX2a(1)         ------>NtERF2 <---------ARR14(2)
             <-----------GT1              <---------RRTF1(1)
            <-----------GT1               <---------RAP2.3(1)
    ------>ZmHOX2a(2)                    --------->ANAC46<---------GLK1(1)
    ===================HOX2a_HOX2a <---------ANAC58 --------->SPL1(2)
   <------ZmHOX2a(2)         <---------DAG2--------->ORA47(2)                                   <---
   ====================HOX2a_HOX2a <---------ANAC58--------->SPL1(1)                         <------NtERF2
  <---------ARR14(2)         <----------DOF2--------->DEAR3(1)                         --------->ALFIN1
  --------->ARR14(2)<----------DOF2<---------ANAC46<---------SPL1(1)            --------->CCA1(2)  <
===============================bZIP_DOF  <---------RAP2.3(2)        <----------DOF2    <---------ATERF1(1)
 
aagccgatcgcgatttttcctctctttctctgctttttgcgtttgcgccgcgctgtacggattttccaaggcttttctaagagttatgggctgggccgag  1745300
                                     <---------ANAC58
                                     <---------ANAC58                          ----------->GT1
                                    <---------MYB46(3)                         <---------MYB46(3)
                                   <-----------ARR10                --------->ARR11(3)
                                   --------->ARR14(2)               <---------GLK1(2)
                                   <---------ARR14(2)               <---------ARR14(2)
                       <---------AHL20(2)                           --------->ARR14(2)
                       <---------AHL20(1)                           <---------ARR11(3)
                       --------->AHL20(2)                         ----------->ARR10      --------->ZAT18
          <-----------HVH21  <-----------GT1               <---------MYB52(1)  <------MYB46(1)
    --------->WRKY18(1)--------->AHL20(1)<---------AtLEC2<---------------AGL15 <------MYB83
   <-----------HVH21  --------->AHL20(2) <---------ANAC58<---------ANAC58    <---------WOX13(1)
------ARR11(3)        <---------ATHB12   <---------ANAC58<---------ANAC58  --------->ATHB12
----------DOF2    ------------>CBF<---------MYB52(1)  <-----------GT1     <---------YAB1<------ZmHOX2a(1)
 
ttctttggtcatgggtcatagcccaataaattacaccggttcttgcctgactatttgtttccgtttgaagagatactctgattggttaagaggacacaga  1745400
                    --------->SPL7
                  <---------SPL7
                  <-----------HVH21
                 <---------ANAC58
                 <---------ANAC58
                 <------MYB83
                 <------MYB46(1)
                --------->MYB55(2)
                <---------MYB46(3)
              <---------MYB52(1)
             <-------GAMYB
            <---------ANAC58
            <---------ANAC46                                          <----------DOF2
            <---------ANAC58                                         <---------ANAC58        <------
        <---------ANAC58                                             <---------ANAC58   <---------YAB1
        <---------ANAC58                                           <-----------GT1     --------->AHL20(2)
 
ctgtgagactggtttgcgttgggtccggtcttgattttgttcaaatttctgctcgacttagatgttttttttgctttcttatcgaaacatttttatagct  1745500
                                                                        --------->ANAC55(2)
                                                                        <---------At4g35610
                                                                       <---------TOE2(3)
                                                                  <---------AHL20(2)
                                                                 <---------AHL20(2)
                                                                 <---------ARR11(3)
                                                  <---------YAB1 --------->AHL20(1)
                                                <---------ICU4   --------->AHL20(2)        ---------
                                               --------->ICU4    --------->ARR11(3)    --------->ATHB12
        <------ZmHOX2a(1)                      <---------YAB1    <---------AHL20(1)   --------->ICU4
   ----------->HVH21                      ----------->GT1       --------->AHL20(2)    <---------YAB1
 <---------ANAC55(2)                     --------->DAG2     --------->AHL20(2) <---------ARR14(2)
 <---------ANAC46                       --------->DAG2     <---------ATHB12    --------->MYB52(1)
---At4g35610   <------ZmHOX2a(1)       ---------->DOF2   --------->WOX13(1)    --------->ARR14(2)
 
gattatgtgaaggagttaggagaattgaatatgggtttatcgaaaaggtgattattgttccaatcaaatatatttaggtgactatcggcatcattgataa  1745600
                                                                                        ------>MYB46(1)
                                                                                 --------->DEAR3(2)
                                                                      <---------------AGL15
                                                                      <----------DOF2   ------>MYB83
                                                                      --------------->AGL15   ------
                                                                 --------->CCA1(2)    <---------MYB59
                                                                 --------->ARR14(1)--------->ORA47(1)
                                                                --------->ARR11(3) ------>NtERF2
                                                                <---------GLK1(2)--------->ATERF1(1)
                                                                <---------ARR11(3) <---------RAP2.6(3)
                                                       --------->ANAC58          <------NtERF2<-----
                                                       --------->ANAC58 --------->AHL20(2)--------->AHL20(2)
                                                 <---------ATERF1(1) ===============================
                   <---------MYB46(3)           <---------ZAT18 --------->ARR14(2)--------->DEAR3(1)
                  --------->ALFIN1       <---------AHL20(2)   ----------->ARR10  --------->ORA47(2)
               <---------ANAC46          --------->AHL20(2)   <---------TOE2(3) ------>NtERF2-------
   --------->CCA1(2)        <---------YAB1      --------->ZAT18 <---------ARR14(2)<---------ETT(1)
  --------->ARR11(3)  ----------->HVH21 --------->AHL20(2)   --------->YAB1 <-----------RAV1(1)
>YAB1     <-----------RAV1(1)      <---------MYB59--------->GLK1(1)  <-----------------AGL3---------
 
gtatagatatagtttgtgggggagggtgaccacgattaccaaaattaataggggactccagcaataagatttgctttaaatggtgccgaccaaataataa  1745700
<- Previous    Next ->

AGI:  At5g05800.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69032.1)
Range:  from: 1743087    to: 1745246    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version