Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<----------
DOF2
<
------->
GAMYB
<---------
ALFIN1
<----------
DOF2
<
<---------
MYB52(2)
----------->
RAV1(1)
<---------
CCA1(2)
--------->
YAB1
--------->
MYB46(3)
<---------
ALFIN1
<------
NtERF2
<-----------
GT1
--------->
AHL20(2)
----->
WOX13(1)
--------->
PCF2
---------->
ID1
<-----------
GT1
------>
ZmHOX2a(1)
--
aatcaacaaacactctgtgatactcaggctcccacactgcttttggcctcat
ttcttttttaacttctgttctccaaaactc
ctaacaattaaaaacgat
1744800
<---------
ZAT18
--------->
ZAT18
<---------
HSFB2a(2)
--------->
ZAT14
----------->
RAV1(1)
--------->
YAB1
------>
MYB83
--------->
ATHB12
------>
MYB46(1)
<---------
ICU4
--------->
ANAC46
-------
<---------
YAB1
--------->
TOE1(3)
<---------
ARR11(3)
----------
DOF2
--------->
TOE2(3)
--------->
ARR11(3)
---------
DAG2
---------->
DOF2
<---------
ICU4
--------->
HSFB2a(2)
------->
TOE2(3)
<-----------
GT1
<---------
AtLEC2
<---------
ATHB12
<-------
acctttatcattgtgaactcgtttttaacaaaagcacagagagacagagacatttgcataaacattaacccaacaattctagatattgaacacaaatcat
1744900
<---------
ANAC58
<---------
ANAC46
<---------
ANAC55(2)
<---------
ANAC58
--------->
LBD16
--------->
RAP2.6(2)
<---------
LBD16
--------->
ANAC46
<-----------
RAV1(2)
----------->
RAV1(2)
--------->
ANAC58
--------->
ANAC58
<---------
LBD16
--------->
O2
--------->
ANAC58
--------->
ANAC58
<-------
MYC3
<---------
O2
--------->
ANAC46
--------->
DEAR3(1)
------->
MYC3
<---------
ZAT2
-->
YAB1
--------->
ANAC58
--------->
ANAC55(2)
--------->
ARR11(3)
--
ATHB12
--------->
ANAC58
<---------
ANAC55(1)
<---------
YAB1
ataaacaaggcattgaaccagagaacgcagacgcaattacttgaaacgtgtttcagggaaaaatatgattttgcgacctgagacttcgcctacttcaaaa
1745000
-
<-
<--
<--
---
<---
----
<---
<---
<---
<----
-----
<----
--------->
ANAC58
-----
--------->
ANAC58
<----
--------->
ANAC46
------
------>
MYB83
<-----
------>
MYB46(1)
--------->
ANAC46
<------
ZmHOX2a(1)
------->
GAMYB
--------->
ANAC58
<---------
YAB1
<------
<---------
MYB59
--------->
ANAC58
<---------
LBD16
--------->
TOE1(2)
<---------
GLK1(1)
--------->
MYB52(1)
----------->
GT1
--------->
TOE2(3)
--------->
TOE2(2)
--------->
GLK1(1)
<-----------
GT1
----------->
GT1
--------->
TOE1(3)
----------->
GT1
<---------
MYB46(3)
-
tcccagtagtaaccgaacacgaaaatggggaaaattgcacgaaaccctaactcgattaatcgggagactgaaaaactacgatagtggttaggatttcgcc
1745100
<------
NtERF2
----->
NtERF2
--------
ANAC46
----
NtERF2
--------->
ZAT2
-------
LBD16
<---------
ANAC58
------>
ATERF1(1)
<---------
ANAC58
------
ATERF1(1)
<---------
ANAC46
-->
NtERF2
--------->
At4g35610
----------->
RAV1(1)
--------->
ALFIN1
------
DEAR4(2)
----------->
HVH21
<---------
RAP2.6(2)
------
ERF1
<---------
ZAT2
<---------
At4g35610
--------->
ALFIN1
------
RAP2.3(1)
<---------
ARR14(2)
<-----------
RAV1(1)
-----
RAP2.3(2)
--------->
ARR14(2)
<---------
O2
---->
ATERF1(2)
--------->
GLK1(2)
<---------
ANAC58
<---------
ANAC58
-----
DEAR3(1)
<---------
GLK1(1)
<---------
ANAC58
====================
---->
DEAR3(1)
--------->
LBD16
--------->
ANAC46
<---------
TGA1a
-----
ATERF1(2)
<---------
LBD16
--------->
ANAC58
<---------
ANAC46
--->
ATERF1(1)
<---------
LBD16
--------->
ARR14(2)
<---------
bZIP60(2)
----
LBD16
<---------
At4g35610
<---------
DOF5.7(2)
--------->
ANAC58
----------->
HVH21
---
RAP2.3(1)
--------->
DOF5.7(2)
--------->
ANAC46
<-----------
HVH21
-------->
LBD16
----------->
GT1
--------->
GLK1(1)
--------->
ATHB12
<---------
ANAC58
ggcgggaattgggaagctgaagaagggaaaacgttac
cgggaatctgatggaaacgcgacagcgattgagtggccactctgtgacgggtgtggctggaag
1745200
--------->
HSFB2a(1)
--------->
GLK1(1)
<---------
GLK1(2)
<---------
ZAT14
--------->
ZAT14
<---------
SPL7
<---------------
AtSPL3
<------------------
SPL14
<------
NtERF2
*
TSS
<----------
DOF2
------>
NtERF2
<------
NtERF2
--------->
ARR14(2)
<---------
DEAR3(1)
--------->
ATERF1(1)
------>
ZmHOX2a(1)
------>
NtERF2
<---------
ARR14(2)
<-----------
GT1
<---------
RRTF1(1)
<-----------
GT1
<---------
RAP2.3(1)
------>
ZmHOX2a(2)
--------->
ANAC46
<---------
GLK1(1)
===================
HOX2a_HOX2a
<---------
ANAC58
--------->
SPL1(2)
<------
ZmHOX2a(2)
<---------
DAG2
--------->
ORA47(2)
<---
====================
HOX2a_HOX2a
<---------
ANAC58
--------->
SPL1(1)
<------
NtERF2
<---------
ARR14(2)
<----------
DOF2
--------->
DEAR3(1)
--------->
ALFIN1
--------->
ARR14(2)
<----------
DOF2
<---------
ANAC46
<---------
SPL1(1)
--------->
CCA1(2)
<
===============================
bZIP_DOF
<---------
RAP2.3(2)
<----------
DOF2
<---------
ATERF1(1)
aagccgatcgcgatttttcctctctttctctgctttttgcgtttgc
gccgcgctgtacggattttccaaggcttttctaagagttatgggctgggccgag
1745300
<---------
ANAC58
<---------
ANAC58
----------->
GT1
<---------
MYB46(3)
<---------
MYB46(3)
<-----------
ARR10
--------->
ARR11(3)
--------->
ARR14(2)
<---------
GLK1(2)
<---------
ARR14(2)
<---------
ARR14(2)
<---------
AHL20(2)
--------->
ARR14(2)
<---------
AHL20(1)
<---------
ARR11(3)
--------->
AHL20(2)
----------->
ARR10
--------->
ZAT18
<-----------
HVH21
<-----------
GT1
<---------
MYB52(1)
<------
MYB46(1)
--------->
WRKY18(1)
--------->
AHL20(1)
<---------
AtLEC2
<---------------
AGL15
<------
MYB83
<-----------
HVH21
--------->
AHL20(2)
<---------
ANAC58
<---------
ANAC58
<---------
WOX13(1)
------
ARR11(3)
<---------
ATHB12
<---------
ANAC58
<---------
ANAC58
--------->
ATHB12
----------
DOF2
------------>
CBF
<---------
MYB52(1)
<-----------
GT1
<---------
YAB1
<------
ZmHOX2a(1)
ttctttggtcatgggtcatagcccaataaattacaccggttcttgcctgactatttgtttccgtttgaagagatactctgattggttaagaggacacaga
1745400
--------->
SPL7
<---------
SPL7
<-----------
HVH21
<---------
ANAC58
<---------
ANAC58
<------
MYB83
<------
MYB46(1)
--------->
MYB55(2)
<---------
MYB46(3)
<---------
MYB52(1)
<-------
GAMYB
<---------
ANAC58
<---------
ANAC46
<----------
DOF2
<---------
ANAC58
<---------
ANAC58
<------
<---------
ANAC58
<---------
ANAC58
<---------
YAB1
<---------
ANAC58
<-----------
GT1
--------->
AHL20(2)
ctgtgagactggtttgcgttgggtccggtcttgattttgttcaaatttctgctcgacttagatgttttttttgctttcttatcgaaacatttttatagct
1745500
--------->
ANAC55(2)
<---------
At4g35610
<---------
TOE2(3)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
--------->
AHL20(1)
<---------
ICU4
--------->
AHL20(2)
---------
--------->
ICU4
--------->
ARR11(3)
--------->
ATHB12
<------
ZmHOX2a(1)
<---------
YAB1
<---------
AHL20(1)
--------->
ICU4
----------->
HVH21
----------->
GT1
--------->
AHL20(2)
<---------
YAB1
<---------
ANAC55(2)
--------->
DAG2
--------->
AHL20(2)
<---------
ARR14(2)
<---------
ANAC46
--------->
DAG2
<---------
ATHB12
--------->
MYB52(1)
---
At4g35610
<------
ZmHOX2a(1)
---------->
DOF2
--------->
WOX13(1)
--------->
ARR14(2)
gattatgtgaaggagttaggagaattgaatatgggtttatcgaaaaggtgattattgttccaatcaaatatatttaggtgactatcggcatcattgataa
1745600
------>
MYB46(1)
--------->
DEAR3(2)
<---------------
AGL15
<----------
DOF2
------>
MYB83
--------------->
AGL15
------
--------->
CCA1(2)
<---------
MYB59
--------->
ARR14(1)
--------->
ORA47(1)
--------->
ARR11(3)
------>
NtERF2
<---------
GLK1(2)
--------->
ATERF1(1)
<---------
ARR11(3)
<---------
RAP2.6(3)
--------->
ANAC58
<------
NtERF2
<-----
--------->
ANAC58
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ATERF1(1)
===============================
<---------
MYB46(3)
<---------
ZAT18
--------->
ARR14(2)
--------->
DEAR3(1)
--------->
ALFIN1
<---------
AHL20(2)
----------->
ARR10
--------->
ORA47(2)
<---------
ANAC46
--------->
AHL20(2)
<---------
TOE2(3)
------>
NtERF2
-------
--------->
CCA1(2)
<---------
YAB1
--------->
ZAT18
<---------
ARR14(2)
<---------
ETT(1)
--------->
ARR11(3)
----------->
HVH21
--------->
AHL20(2)
--------->
YAB1
<-----------
RAV1(1)
>
YAB1
<-----------
RAV1(1)
<---------
MYB59
--------->
GLK1(1)
<-----------------
AGL3
---------
gtatagatatagtttgtgggggagggtgaccacgattaccaaaattaataggggactccagcaataagatttgctttaaatggtgccgaccaaataataa
1745700
Previous
Next
AGI:
At5g05800.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69032.1)
Range:
from: 1743087
to: 1745246
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version