Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->ANAC58     --------->ANAC46     --------->ANAC58 ------>ZmHOX2a(1) ------DOF2 ----DAG2          --------->GLK1(2)       ------------------------>ANAC81                   -------- ---GT1          <------ZmHOX2a(1)        --------->GLK1(2)                          <------ZmHOX2a(2) >REM1(1) <---------At4g35610             ------------------------>ANAC81         --------->LBD16 -ALFIN1  --------->At4g35610 <-----------GT1                 ---------->DOF2   <---------LBD16   ttcctacaagacagctataggaatctatgtattaacctcgttagaatccaaaaaaaaaaaaaaaaaaagcctaatttcattatccggatcaaatacccta  1730600                                                                                    --------------->AtSPL3                                                                         ------>ZmHOX2a(2)                                                                        --------->CCA1(2)                                                                        <------ZmHOX2a(2)                                       --------->At4g35610             --------->ARR11(3)                                       <---------ZAT2                  --------->ARR14(2)                                       --------->ZAT2                  <---------ARR14(2)                                       <---------At4g35610             <---------AGP1----------->GT1                         --------->ANAC46       <---------AHL20(2)     --------->AGP1------>ZmHOX2a(2)                  --------->ARR14(2)  ----------->RAV1(1)    <-----------------------TaNAC69(2) <----       <---------YAB1    --------->ANAC58      <---------AHL20(2)      <---------ARR11(3)       <----      <---------TOE1(2)  --------->ANAC58      --------->AHL20(2)    ----------->ARR10  <---------TOE1(2) ->TOE1(3)        <---------ARR14(2) <---------HSFB2a(2) <---------At4g35610       --------->ARR14(2)   acatttctcatgtttattcaaatccagacgaaattgattccagcagaaattaaatatgaagatgacgagcatagatctgatactggatcgtacatttagc  1730700                                            --------->LBD16                                            <---------HSFB2a(2)                                           <---------LBD16                                           <---------ANAC46                                          ------>ZmHOX2a(2)                                          <---------LBD16                                    <-----------------AGL1                                    ----------------->AGL1                                    ----------------->AGL2                                 --------->MYB55(1)                                <---------MYB46(2)                        --------->TOE2(3)<------ZmHOX2a(2)                        <----------DOF2 --------->ARR14(2)                          <---------MYB52(1)                  <---------bZIP60(2)   <---------ARR14(2)                    ----------->HVH21                  <---------ANAC46 -------->P                                --------->ATERF1(1)                  <---------ANAC58------>MYB83  --------->ANAC58            <---------ATERF1(1)         ------>ZmHOX2a(2)      <---------MYB52(2)                       --------->LBD16       --------->ARR11(3)       <---------MYB111(1)                     --------->LBD16       <---------ARR11(3)    <-----------GT1--------->HSFB2a(2)        <---------LBD16              <   <---------O2   <---------O2 --------->ANAC55(2)                    ------>ZmHOX2a(2)            <-   --------->O2   <---------ANAC58------>MYB46(1)                   --------->ARR14(2)             -- -----ANAC58   ----------->TGA1<---------ANAC55(2)     <---------YAB1<------ZmHOX2a(2)           ---- -----ANAC58   ----------->HVH21<---------MYB59 --------->ANAC58    <---------ARR14(2)         <-----   gagcctcgtgatcttctgtgacgtttctttaatacctaacccgatccgggaagccttcttattgaattcggatcccggagacgaccgtttggatgatgcc  1730800                                                                                  ------>ZmHOX2a(2)                                                                                 <---------GLK1(1)                                                                                 --------->GLK1(1)                                                                           --------->ORA47(1)                                    --------->ARR14(2)                     <-----------HVH21                     --------->MYB52(1)                                    <---------SPL7                    ----------->HVH21           --------->ATHB12          --------->DEAR3(1) ------ZmHOX2a(2)   <---------SPL7  <---------ARR11(3)                 <---------ALFIN1 --------ARR14(2)  --------->MYB46(3) ------>ZmHOX2a(2)            --------->At4g35610 ------->ARR14(2)  --------->DEAR3(2)<------ZmHOX2a(2)             <---------At4g35610  ------->TEIL ----->LBD16      ------->TEIL      <---------ARR14(2)            ------->TEIL   <------ZmHOX2a(2) ----LBD16       --------->MYB52(1) --------->ARR11(3)    --------->At5g28300--------->SPL7        --   ggatcatcttcatcttgatgaacggacgggattgccccgatcttcttcaatgtttgggacagtgaatgaagctccaccgtccgatctctgaacgtcgagc  1730900                              --------->LBD16                             --------->DEAR3(1)                             <---------ATERF1(2)                             --------->ATERF1(2)                             --------->DREB2C(2)    --------->At4g35610                            --------->At4g35610     <---------At4g35610                            <---------LBD16       <-----------RAV1(2)                        <-----------HVH21        ------>ZmHOX2a(1)          --------->MYB52(1)     --         --------->ETT(1)  --------->MYB52(1)   --------->TOE2(3)     --------->HSFB2a(2)  --------->WOX13(1) ------->MYB52(1)    ---------->DOF2       ------->TEIL       <----------DOF2           ------->TEIL   ccatcggagggtcggaattgaactaaagtcaccggcaaattgatgaatttcctcagatgatgagctttatttcgagagtaacgagagatgtatcaatcgg  1731000                                       --------->TOE2(3)                                      --------->ANAC46                  <---------AHL20(2)                                      --------->ANAC55(2)              <---------YAB1                                      <---------ANAC55(2)            --------->AHL20(2)                                    <-----------GT1                  --------->YAB1                                  <----------DOF2                   <---------ATHB51                            --------->ARR14(2)                   <---------AHL20(2)                <-                            <---------ARR14(2)           <---------TOE2(3)                    -------                           <----------TaMYB80          <---------AHL20(2)                     <------                          <---------KAN4(2)           --------->AHL20(2)--------->AHL20(2) --------->AHL20(2) -------->DOF2        *TSS---------->TaMYB80   <-----------GT1  ------------>CBF           <---------AHL20(2)   agaaagagactgagaaacatatagggagcatattcgatttacgtcaaaataacaaattttatgttattcaattataaatttttaaaagtttaataaaatc  1731100    <------------CBF  <---------YAB1                         <---------TOE2(2)                           <-----------GT1 --------TOE2(3)                         <---------TOE1(2)                           <---------AHL20(2) -->ARR11(3)            <---------ARR11(3)      --------->AHL20(2)           <---------AtLEC2 ---ARR11(3)            --------->ARR11(3)     <---------YAB1         <---------AHL20(2)   taatgttattgaacaagtgattctaaaatctacttaaaaatcccatgttattaaaaacatttgagacttaagttaatttgaatggatttacttacttcaa  1731200                                                                                --------->TOE2(3)                                                                           <---------AHL20(1)                                                                        --------->YAB1                         <---------TOE2(3)                           --------->YAB1                         <---------TOE1(3)                          <---------ATHB12      --------->ANAC58                   <---------ICU4                                <---------AHL20(2)       --------->ANAC58                  --------->ICU4                                 --------->AHL20(2)       --------->ANAC46                  <---------YAB1                           <-----------GT1 --------->AHL20(2)                --------->YAB1  <-----------GT1        <---------ARR11(3)  --------->AHL20(1)      <-         --------->AHL20(2)     --------->YAB1         --------->ARR11(3)  <---------AHL20(2)   -----    <---------GLK1(2)    --------->MYB59             ----------->ARR10 <---------YAB1   <-----------GT1   aatacagaattttaaatctcataattttaggttataacaacttcttgaatttgagaagattttacaataaatcataataaattcttaaattcactcaatt  1731300                                                                                                    <                                                                                                  <--                                                                                                  <--                                                                                                 ----                                      --------->ANAC58                                    <---------ANAC46                                      --------->ANAC58                                    <---------ANAC58                                 <---------ATHB12                                         <---------ANAC55(2)       --------->YAB1     --------->WOX13(1)                               --------->ARR11(3)    <---     <---------ARR11(3)  <---------AHL20(2)                              --------->ANAC58 <---------ANAC58 ----------GT1           --------->AHL20(2)                              --------->ANAC58<-------TEIL ---->AHL20(2)          --------->AHL20(2)                     <---------ALFIN1         --------->ALFIN1   ttttcaaaatcatataaaaactcaaaataaatcaaatcactcgaaatataacattgaatacatctccacagtagtaagaaattgatagaagtgcgtgtca  1731400                                                                                    <----------DOF2                                                                                    <xxxxxxxxxxxxxxxx                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                            --------->DAG2                                                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                        --------->AtMYB61                                                                        ------->GAMYB                                                                       --------->MYB46(3)                                                                      --------->ANAC58                                                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      --------->ANAC58                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                               xxxxxxxxxxxxxxxx>smallRNA(i)                                                            <---------TOE2(3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                           <-----------GT1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <-----------GT1 ---------->DOF2                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxx                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxx                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        ---                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    -------                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxx                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxx                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxx                                              <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ----------->GT1                            <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------YAB1                     <-----------RAV1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ------- ---------YAB1                       xxxxxxxxxxxxxxxx>smallRNA(i)    <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------HAHB4                      <---------YAB1 <-----------HVH21xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) -------ICU4                   <---------YAB1xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----->ICU4              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------YAB1              ---------->ID1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->ALFIN1   <--   ttattatgttataacatcgaacgtcttgttgtttttattcttgttggaccgtgtcccgttttaacatttggcaaccaaaaggtgtgcgtttaggcattaa  1731500  Previous    Next  AGI:  At5g05760.1    Description:  SYP31 (T-SNARE SED 5); SNAP receptor. Identical to Syntaxin-31 (SYP31) [Arabidopsis Thaliana] (GB:Q9FFK1;GB:O65099); similar to SYP32 (syntaxin 32), SNAP receptor [Arabidopsis thaliana] (TAIR:AT3G24350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41331.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 1728894    to: 1731022    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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