Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->LBD16                                                                                 ------>ZmHOX2a(2)                                                                               --------->ARR11(3)               --------->AHL20(1)   --------->ANAC58                           <---------ARR14(2)               --------->ARR11(3)   --------->ANAC58                           --------->ARR14(2)            --------->AHL20(2)  <---------MYB52(2)                             <---------AGP1          --------->AHL20(2)    --------->MYB46(3)    ----------->GT1<----------DOF2   --------->GLK1(2)    ---------->DOF2  <---------ANAC55(2)--------->LBD16  ---------->DOF2      <---------CCA1(2) ----HSFB2a(2) <---------AHL20(1)  ------->TEIL   >>>>>>>>>TBF1     --------->TOE2(3)  <---------ARR14(2) --->HSFB2a(2) <---------ARR11(3)------->GAMYB >>>>>>>>>TBF1     <-----------GT1<------ZmHOX2a(2)   -   gaaattgaaagaaaaaatatatcacataaattcaacgaaccccagagaagaagaagaagtaaagaagttacctttaagtcggatctgggaatcggagaac  1556200                                       --------->AHL20(2)                                       --------->YAB1                                --------->At4g35610                                <---------At4g35610                                <------NtERF2                               <---------ATERF1(1)                               <---------RAP2.3(1)                               <---------RRTF1(1)                               <<<<<<<<<AtERF-1                               <---------DEAR3(2)                               <---------ERF1                               ------>NtERF2                               <<<<<<<<<AtERF-5                               <<<<<<<<<AtERF-3                              <---------DEAR3(1)                              <---------ANAC58                              <---------RRTF1(3)                              <---------RRTF1(2)                              <---------ANAC58                              <---------ANAC46                              <---------ATERF1(2)                                 ----------->HVH21                              <---------RAP2.6(2)                               --------->CCA1(2)                              <---------DREB2C(2)                              --------->ARR11(3)               <---------ANAC46<<<<<<<<<AtERF-7                                <---------ARR14(2)               <---------ANAC58<<<<<<<<<AtERF-4                                <---------ARR11(3)               <---------ANAC58<<<<<<<<<AtERF-2                                --------->ARR14(2)   -    --------->LBD16           <---------RAP2.3(3)          --------->TOE1(2) ----------->ARR10      -   --------->HSFB2a(2)        <---------RAP2.3(2)   --------->ANAC58      --------->ANAC46         --   <---------HSFB2a(2)       --------->RAP2.6(3)    --------->ANAC58   --------->TOE1(2)      ------- -------->ANAC46         <---------AtLEC2         ---------->DOF2   <-----------GT1    --------->ANAC46   accctccagaaacagcgtcgtgttcttccatggcggctcaattaaaaacctcgaaagcaaacctagaaatttacccacgaagatttgacacaaaacaaaa  1556300          --------->HSFC1(1)          <---------HSFC1(1)          --------->HSFB2a(2)     <---------HSFB2a(1)     --------->HSFC1(2)                                                                       <------     --------->HSFB2a(1)                                                         --------->DAG2     <---------HSFC1(2)                           --------->GLK1(2)     <---------ARR14(2)   -------- --------->ANAC58                        <---------MYB46(3)   ------>ZmHOX2a(1) ---------->DOF2 <---- --------->ANAC58                       <---------YAB1    --------->ARR14(2)--------------->AGL15 -------->LBD16                       ----------->GT1     <---------ARR14(2)<---------------AGL15<--- ----->NtERF2                  --------->LBD16   --------->ARR14(2)     --------->ARR14(2)   -------- ------->RAP2.6(2)         --------->ANAC46      <---------ARR14(2)   ----------->ARR10      <------- --->DOF2 <---------HSFB2a(2)<---------LBD16     <---------GLK1(2) ----------->GT1           <-------   gccgcgaaatttcgagaaattggagataaaccccagaaaatggtgattacagattctctgaatcctcgagggaaaatactcaaaaaggagaccgagggtt  1556400                          ----------->HVH21                         ------>ZmHOX2a(2)                        <------ZmHOX2a(2)           <---------HSFB2a(1)                        --------->CCA1(2)           --------->HSFB2a(1)                       --------->ARR14(2)           <---------KAN4(1)                       <---------ARR11(3)           <---------HSFC1(2) ---ARR14(2)           <---------ARR14(2)           --------->KAN4(1) ->HSFB2a(1)           --------->AGP1              <---------KAN4(2) ---TEIL               --------->ARR11(3)   --------->ATHB12 ------ANAC46          <---------AGP1      <---------YAB1                                           > ->HSFC1(2)           --------->RVE1(1)    --------->ICU4                                        >>>> --HSFC1(2)        ---------->DOF2       ---------->DOF2                                      >>>>>>> --HSFB2a(1)  ----------->GT1     --------->WOX13(1)--------->HSFC1(2)                     >>>>>>>>>TBF1   cgggtgatgaagtctagggtttaaagatctgatggtcaattagtaaagattggaatgttcgattttgagaccctagaattggagaagagggaagaagaag  1556500                                            --------->ATHB51                                            <--------ATHB1                                            <---------ICU4                                            <---------AHL20(2)                                            --------->AHL20(2)                                           --------->ICU4                                         --------->YAB1   ---------->DOF2                <---------MYB52(1)   --------->ANAC58                             < >>>>>>>>TBF1                    <-------GAMYB         --------->ANAC58 ---------->ID1            <-- >>>>>TBF1          --------->ZAT18    --------->AHL20(2) ----------->RAV1(1)                     --- >>TBF1             <---------ZAT18    <---------AHL20(2)*TSS     <---------YAB1                 <---   aagaagaaagaggtgagaagagcgcgcgatgtctgcgttgttttaataatttctgacaaacaacaaatatgtttgttttttttggggttttttttgtttt  1556600             <---------TOE1(3)        <----------DOF2       ------>ZmHOX2a(2)     <---------ARR14(2)                                                             <---------ARR11(1)     --------->ARR11(3)                                                             ------->TEIL     <---------ARR11(3)                                                             --------->GLK1(2)     --------->ARR14(2)                                                             <---------ARR14(2)     <---------AGP1                                                                 --------->ARR14(2)     ------->TEIL                                                                  <---------ARR14(1) ---------AtLEC2                                                             <---------YAB1 -------HSFB2a(2)                                                        <----------DOF2 ------>HSFB2a(2)                                             <---------AHL20(1)   <---------CCA1(2) ------LBD16 <---------TOE2(3)            --------->ANAC46 ----------->GT1 --------->YAB1           <   ctggatggatcttttgaggtttttcaaattcaaacaagacttaaacgcgatttggagggaatagtatatttgggcctttataatcgaatcttttgtatca  1556700                                      <---------MYB111(1)                                      <---------MYB111(2)      --------->HSFC1(2)                                     ------>MYB46(1)           <---------HSFB2a(1)                            --------->YAB1                --------->HSFB2a(2)                           <---------AHL20(2)             <---------HSFB2a(2)                          <---------AHL20(2)             <---------ANAC55(2)                     ----           <----------DOF2--------->AHL20(2)       <---------ARR14(2)                         -------    ---------->DOF2   <----------DOF2------>MYB83  --------->ARR14(2)------>ZmHOX2a(1)        <------ -------TEIL    <-----------GT1 <-----------GT1 ----------->GT1--------->HSFB2a(1)  <----------DOF2<-   aattcgtaaaggcctttttcacttcttttttaataaaccaactacttaaaccgtatattacgagaaggctcctcttgccatttgaactttcaatttaagt  1556800                    <---------AtLEC2                    <---------ANAC58                    <---------ANAC46                    <---------ANAC58               --------->ATHB12              <---------AHL20(2)   --------->ARR11(3)                         ----------->GT1          --------->ICU4 ------->TEIL <----------DOF2                      --------->ATHB12 ----->MYB52(1)<---------ICU4      <---------ARR11(3)                --------->YAB1 -->ANAC55(2) --------->AHL20(2)  --------->GLK1(1)                  --------->AHL20(2)            <- ---ANAC55(2) --------->ICU4 ----------->GT1          <---------ANAC46    <-------TEIL             <- -----------MYB.PH3(1)   <---------YAB1         <---------AHL20(2) --------->AHL20(2)              --   aacagatttataagtattaattgcatgaatattgtgaaatcttttgttattcaattgtgtattttggaaaataatattcattgtaaatttgtaatctaca  1556900                                                                                                    <                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                               ------                                                                                            ---------                                                                                     --------->MYB59- --------ICU4                     --------->AHL20(2)                           ---------->DOF2<------ --------AHL20(2)                 <---------AHL20(2)                    <----------DOF2    <---------YAB1 ------->AHL20(2)                --------->AHL20(2)             <---------AHL20(2)   <---------TOE2(3)   attaatacattaagacacttgttattctacctccatttaattttgttacttcaaaaaaaaacatatttgattttcttttgctaaagtaaggttttgataa  1557000    <-----------GT1                                      <-----------GT1 <---------ICU4                                      --------->AHL20(1) --------->YAB1                                      <---------AHL20(1) ---------YAB1                                       --------->AHL20(2) ------>YAB1                                         <---------AHL20(2) -------ICU4                                  <---------AHL20(2)                       <-----------GT1 ------YAB1                      <---------TOE2(3)--------->AHL20(2)                   <---------AHL20(2) ----->ICU4               --------------->AGL15   --------->YAB1      --------->WRKY18(1)--------->ANAC55(2) --->YAB1              <-----------GT1       --------->AHL20(2)     <------MYB83--------->TOE2(3) >YAB1 <---------AHL20(1) <---------------AGL15--------->YAB1       <------MYB46(1)--------->AHL20(2) -------->ICU4     --------->AHL20(2)        <---------AHL20(2)    --------->MYB59 <---------AHL20(2) ---YAB1           <---------AHL20(2)    <---------AHL20(2) <---------MYB59<---------MYB52(2)       -   taataataacatatttgatatttttttactaaattaagtttatattttttaataatattttaccaaaatttggtcaaactaacatttatttacatgataa  1557100  Previous    Next  AGI:  At5g05240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G40630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61688.1); contains InterPro domain Uncharacterised conserved protein UCP030365 (InterPro:IPR016953) Range:  from: 1553815    to: 1556557    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g05250.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G56360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41488.1) Range:  from: 1557038    to: 1557999    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version