Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->AtLEC2                                                        <---------ICU4                                                       <---------YAB1                      ------>ZmHOX2a(2)                                             --------->ANAC58                             <---------At4g35610         <---------ARR14(2)                  --------->ANAC46                             --------->At4g35610         --------->ARR14(2)                  --------->ANAC58                        <----------DOF2 ---HVH21--------->ARR11(3)         ----------->GT1<---------ARR11(3)        <---------TOE2(3) ------   agaaattagcatatattgaatgcgagattacaaatactaggtaattcaagctagataatcaatgcaagttgtgttcatttagatttactttgatctgaag  1549900                                                                                                    -                                                                                                 ----                                                                <---------ANAC58                -----                                                          <---------ARR14(2)                    =====                                               <-----------RAV1(1)                          <--------                                         <---------AHL20(2)     <---------ANAC58            ---------                                         <-----------GT1  --------->ARR14(2)             <----------DOF2                                     <--------HAHB4    ------>ZmHOX2a(2)                 ============                                     --------->ATHB51 <------ZmHOX2a(2)               <---------AHL20(1)                                     <---------ICU4   <-----------------AGL1          --------->ARR11(3)                                     -------->ATHB1  <---------ARR14(2)               --------->AHL20(1)                                    --------->ICU4   --------->ARR14(2)               <---------ARR11(3)         --------->GLK1(1)   <---------ARR14(2)<---------MYB46(3)     <-------TEIL   --------->RVE1(1) --->bZIP60(1)             ----------->ARR10<----------DOF2     <---------ANAC46     --------->CCA1(1)   tcatatgtgagaaatcaaactaatccgagtagatttgaattattaacttttgttggatccgatttggcctggttcatactacagaaaatatctttcagaa  1550000                  ------->MYC3                 --------->TGA1a                 --------->O2        ------>ZmHOX2a(2)       <------ZmHOX2a(2)                                                                           --      <---------ARR11(3)                                                                         <---      --------->ARR11(3)                                                                         <---      --------->AGP1                                                                             <---      <---------AGP1                                                                            <----   --------->HSFB2a(2)                                                                          <----   <---------HSFC1(1)                                                                           <----   --------->HSFC1(1)                                                                           -----   >>>>>>>ZML2   ===================================bZIP_DOF                                    <----   <---------HSFB2a(2)                                                                       <------MYB46(1) -------->ARR11(3)<-------MYC3                                                              --------- ----->DAG2      <---------TGA1a                                             ======================== ----->DOF2      <---------O2                                                ---------->DOF2--------- ==========================bZIP_DOF                                   --------->DAG2   ============== -HSFB2a(2)    --------->MYB52(1)                          --------->DAG2  <---------RAP2.6(3) <----- >HSFB2a(2)  --------->MYB46(3)                 <---------YAB1       ---------->DOF2   ---------->DOF2 ==========================bZIP_DOF      <----------DOF2  ---------->DOF2 --------->RAP2.6(2)<------MYB83   aagttctagatctaaacaaacgtgtctgatttagaacagtaagctttactatgctaaacaaaaagcttggataaagccgaaaagagagtcaaagtaggtc  1550100                          --------->ANAC58                                                  <--------                   --------->ALFIN1                                                         ---------                  -------->ABF1                                                             ---------                  <-------MYC3                                                              <--------                  ------->MYC3                                                              <--------                  <-------MYC2                                                              ---------                  <-------PIF5                                                              <--------                  ------->PIF5                                                              <--------                  ------->MYC4                                                              <--------     <---------GLK1(2)    --------->ANAC58                                                  <-------- ---------->DOF2  <-------MYC4                                                             ---------- ==========================bZIP_DOF                                                      ----------->HVH21 --------->HVH21  ------->MYC2                                                           ----------->TGA1 ------DEAR3(2)  --------->O2                                                        <---------YAB1 ---MYB46(1)     <---------O2                                                      --------->YAB1 ---MYB83        <---------TGA1a                                              ======================= -----DEAR3(1)   >>>>>>>>>>HY5                                                <---------TGA1a -----DEAR4(1)   >>>>>>>>>>AtMYC2                                             --------->ANAC58 -----DREB2C(2)  >>>>>>>>>>ABI5  <---------ZAT2                               --------->TGA1a ---->MYB46(2)   --------->TGA1a --------->ZAT2                               --------->ANAC58 -----MYB46(3)   --------->ANAC55(2)                                          --------->ANAC55(1) >MYB59          <---------bZIP60(2)                                          --------->ANAC55(2) ==========================bZIP_DOF                                           <---------ANAC55(2) --- >MYB111(1)      <---------ANAC55(2)      --------->GLK1(2)                   --------->ANAC46------- ==========================bZIP_DOF       <---------ARR14(2)  <---------ICU4<---------ALFIN1<-------- ----ORA47(1)  <xxxxxxxxxxxxxxxsmallRNA(le3) <---------HSFB2a(2)          <---------ALFIN1 <---------   ggtgaaagagtctcgagacacgtggcacaagaaccagcttggggaatctcgaaaactctcttactcatcgccattcccacacgtatgatgaatgacgtgt  1550200  <---------ATHB12 -ANAC55(1) >O2 >ANAC55(2) -O2  <------ZmHOX2a(2) -bZIP60(2)                                   ------>MYB83 >TGA1a                                       ----------->RAV1(1) -ANAC58                          ------>MYB46(1) -ANAC58                          --------->MYB52(1) -ANAC46                         --------->MYB55(1) -ANAC55(2)                     --------->MYB46(3) ->STF1                         <---------MYB55(2)       -------->P =bZIP_bZIP                  <-----------GT1--------->MYB46(3) --------->CBF       --------->TOE2(3)      <---------MYB59                 <---------At4g35610     - -->ALFIN1           --------->TOE1(3)     --------->ANAC58         *TSS    --------->At4g35610     < -TGA1a           <---------ALFIN1------>MYB83------>MYB46(1)      ------------>CBF                -- --------------TaNAC69(2)----------->TBP   --------->ANAC58       <<<<<<<<<<<<<<<<<LFY          -----   gccaatggatcacattacccaaaccttatataaacccaccgagagacccaacaaaactctaccagacaaaacaatggaagctatctctcaaacctgcaca  1550300          -------->P          ------>MYB83          ------>MYB46(1)         --------->MYB55(1)        <---------ALFIN1                                                                            <        --------->MYB46(3)                                                                         <-        --------->AtMYB61                                                                          <-        <---------MYB111(1)                                                                        <-        --------->DEAR3(1)                                                                        <--        <---------MYB55(2)                       --------->ANAC58                                 <--        <---------MYB46(2)         --------->TOE2(3)  --------->GLK1(1)       ---------->DOF2     <--        <---------MYB111(2)     <-----------GT1  --------->ANAC46          --------->TOE2(3)      <-- =============================HOX2a_HOX2a        --------->ANAC58          --------->TOE1(3)     <--- <------ZmHOX2a(2)      --------->ARR14(2)      <---------LBD16     --------->At4g35610         ----- -------->ARR11(3)      <---------ARR14(2)      <---------At5g28300 <---------At4g35610       <------ ---------ARR11(3)      <---------ARR11(3)    ----------->HVH21     --------->ZAT2           <------- ------->YAB1          <------ZmHOX2a(1)     <-----------HVH21      <---------ZAT2           -------- ----->DOF2         <---------At4g35610--------->At4g35610       ---------->DOF2          <------ZmHOX2a(1)   aagatcatcaccaacccatctcagaggatatataaaacctcatctccagtcacggcaattccacaaacaaagctgagccttaaagtcaagaaggagaggt  1550400     <---------ZAT2     --------->At4g35610     <---------At4g35610   <---------RAP2.6(2)  <---------At4g35610  --------->At4g35610 <---------MYB46(3) --------P                                 ------>NtERF2 --------ANAC58               ------>ZmHOX2a(2) ------GAMYB                <---------ARR14(2) --------ANAC58             --------->ARR14(2) -------MYB46(3)        =========================RAV   --------->WOX13(1) ----MYB46(1)           <-----------RAV1(2)--------->LBD16 -------DEAR3(2)     <---------ANAC58      --------->RAP2.6(2) ----MYB83           <---------ANAC58    <---------LBD16            <------ZmHOX2a(1) ------MYB46(3) --------->ALFIN1         <---------At4g35610     <------NtERF2                     -- ---->ALFIN1    <---------ANAC58         --------->At4g35610    --------->LBD16                    <- ---O2          <---------ANAC58      <---------At4g35610     <---------LBD16                      -- --AtMYB61      <---------ANAC46     <-----------RAV1(1)    --------->ANAC46 <------ZmHOX2a(1)    <-- ->ALFIN1      <-------TEIL<------ZmHOX2a(1)<------NtERF2<---------ATHB12 <------ZmHOX2a(1)       ---   gggttgctgctgctagatgcgtggcttcaggatcggattatgctgcggcaatggagccaattacgccggaggaagaggaggaattgactcagagaagagg  1550500            ----------->GT1                                                             ------>ZmHOX2a(2)      --------->ALFIN1                                                                --------->ARR14(2)      <---------ANAC46                        <---------ANAC46                        <---------ARR14(2)    <---------ANAC46                          <---------ANAC58                        --------->ARR11(3)   --------->ALFIN1                           <---------ANAC58             --------->ICU4   <-----------RAV1(1)                   <---------ANAC58                  <---------YAB1 ------>ZmHOX2a(1) <-----------RAV1(1)              --------->ARR11(3)                     --------->YAB1<------ZmHOX2a(2) ------->GLK1(1)                 <---------At4g35610              <---------LBD16    --------->GLK1(1) --------GLK1(1)                 --------->GLK1(1)            <---------YAB1--------->ATHB12       <- ------->CCA1(2)                 <---------GLK1(1)  ---------->DOF2     --------->ICU4<---------ARR11(3) -------ARR14(2)          --------->ALFIN1  --------->ZAT18 <---------------AGL15    <---------GLK1(1) ------>ARR14(2)       <------ZmHOX2a(1) <---------ANAC58   --------------->AGL15   ----------->ARR10   gatatgtggtggagaagtaaacagaggagtatgggagctcttggagtgccttgagaaagaagctattatggggaatgatgatgggagagatcctagagat  1550600                                             --------->ARR11(3)                                             <---------ARR11(3)                                          --------->HSFB2a(2)                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    --------->ARR14(3)                                    <---------ARR14(3)                                              <                                    --------->ARR14(2)                                              <               <---------ARR11(3)   --------->ARR11(3)                    ------>ZmHOX2a(1)     <----               <---------GLK1(2)    <---------ARR14(2)           <------ZmHOX2a(2)              -----               --------->ARR11(3)   --------->AGP1               ================HOX2a_HOX2a   ------             ----------->ARR10      <---------ARR11(3)          --------->ARR11(3)             ------ --------YAB1--------->ICU4       ----------->ARR10            <---------GLK1(1)    --------------->AGL15   tacaatagaagagcaaagatttttgacaagagttctaagatcttcaagaacttaaatgaacagagagatcaggctcctgttgattaccttgagaaggaag  1550700             --------->ICU4        --------->At4g35610        <---------At4g35610                                                     --------->HSFB2a(2)       ------>NtERF2                                                        ------>ZmHOX2a(2)      <---------RAP2.3(3)                                                  <------ZmHOX2a(2)      <---------RAP2.6(2)                                                 --------->ARR11(3) --------->YAB1                                                           <---------ARR11(3) ---------YAB1--------->ATHB12                       <---------ARR11(3)   --------->ARR14(2) ---------ATHB12                     <---------YAB1  <---------GLK1(2)    <---------ARR14(2) -----At4g35610                   <---------YAB1     --------->ARR11(3)   <---------ARR14(3) ---->At4g35610        <------ZmHOX2a(1)           --------->ICU4         --------->ARR14(3) --->ANAC58  <---------YAB1  ---------->DOF2---------->DOF2               --------->AGP1 --->ANAC58<---------At4g35610 --------->ICU4      ----------->ARR10    ----------->ARR10---------->DOF2   ctatcatgggggctgatgatgggaaggaccctaaagattataacagaagagcaaagatttttgacaagagttctaagatcttcaagaacatcaaagaaca  1550800  Previous    Next  AGI:  At5g05220.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN82940.1) Range:  from: 1550268    to: 1550929    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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