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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                --------------->AGL15
                                                                <---------------AGL15
                                                               ----------------->AGL2
                                                             --------->ANAC58
                                                             --------->ANAC58              <--------
                                              --------------->AGL15             --------->ANAC58
                                              <---------------AGL15             <---------TOE2(3)
                                         <----------DOF2 --------->At4g35610    --------->ANAC58
                                     <------ZmHOX2a(1)   <---------At4g35610 <------ZmHOX2a(2)
                                 ---------->DOF2       <--------P           --------->ARR11(3)
                            <---------ANAC46 ----------------->AGL1        --------->At4g35610
---------->GT1          --------->At4g35610  <-----------------AGL3---------->DOF2         ---------
-ANAC46  ------->TEIL   <---------At4g35610  ===================================MADS_MADS <---------
 
aactgaaaaatgaagctatcgagattgagcagcgagtaaaggacctttgcaaattttggtagctaagccataaagagcagatcaaggaaacgactttact  1547000
                                                              ---------->DOF2
                                                           --------->ANAC58
                                                           --------->ANAC58
                                                       --------->SPL7
                                                      ----------->HVH21                 <------NtERF2
                                                     <-------MYC2                      --------->LBD16
                                                     <-------PIF5                      <---------ATERF1(1)
                                                     ------->MYC2                      ------>NtERF2
                                                     <-------MYC3                     <---------ATERF1(2)
                                                     ------->MYC3                     --------->DEAR3(1)
                                                     ------->PIF5                     <---------DEAR3(1)
                                                    <---------ANAC58                  --------->ATERF1(2)
                                                    <---------ANAC58                 <---------LBD16
                                                  ------->GAMYB          --------->RAP2.6(2)
                                               <---------ARR14(2)--------->ZAT2   --------->SPL7
                                 ----------->GT1<---------At5g28300      --------->ANAC58  <-------GAMYB
                         --------->TOE1(2)     --------->ARR14(2)<---------ZAT2 <---------SPL7
 ---------->DOF2         --------->TOE2(2)   --------->At5g28300 --------->At4g35610 --------->ATERF1(1)
-ZAT14                  ----------->RAV1(2)  --------->DOF5.7(2) <---------At4g35610<---------ATERF1(1)
>ZAT14            --------->ANAC58          ------->GAMYB <---------LBD16--------->ANAC58 <---------MYB46(3)
-DOF2             --------->ANAC58       --------->MYB52(1)--------->ANAC46 --------->DEAR3(1)     -
 
gaaggaaagagaagagaaaacaagtaaacctgagaatggtgaaataacggtaaccgcgtgccacggaaagctgagaccgccatcgttcgccggcgattga  1547100
                                                                                                   <
                                                                                                 <--
                                                                                            ------>ZmHOX2a(1)
                                                                                          ----------
         --------->ANAC58                                                               --------->ARR14(2)
         --------->ANAC58                                                               <---------ARR11(3)
         --------->ANAC46                          --------->DAG2                       --------->ARR11(3)
<---------At4g35610                               ---------->DOF2<---------ANAC46       <---------ARR14(2)
--------->ZAT2            <----------DOF2 --------->ANAC58      *TSS                   --------->RVE1(1)
<---------ZAT2      --------->WRKY18(1)   --------->ANAC58    <---------MYB52(1)       --------->CCA1(1)
--------->At4g35610<-----------HVH21    ---------->DOF2   ------>NtERF2          ----------->GT1 <--
---------->RAV1(1)--------->LBD16    --------->ANAC46    <---------ALFIN1      <------------CBF <---
 
agcagcagagacaagacactccggtcaagctttattactcacaaaacgcacagaaaagcgacaccgttttgtatattttgaaaattgaaaatatcctgag  1547200
                            ------->MYC3
                    ------->MYC2
                    <-------MYC2
                    ------->MYC4
                    <-------MYC3
                    <-------PIF5
                    <-------MYC4
                    ------->MYC3
                    ------->PIF5
                   <<<<<<<<<<HY5
                   <---------ANAC46
                   ============================MYC_MYB
                   <---------TGA1a
                   <---------O2
                   --------->O2
            <----------TaMYB80
            <---------KAN4(1)
           <---------ARR14(2)
           <---------KAN4(2)<-------MYC3
       ----------->GT1     <---------ANAC46
     <---------ANAC46   <---------ARR14(2)
   <---------ZAT14 <---------PIF3(3)
  ----------->HVH21--------->PIF3(3)
  --------->ALFIN1 --------->TGA1a                                --------->ARR14(2)
<---------ANAC46---------------->PIF3(2)               --------->ANAC58
------NtERF2--------->KAN4(1)                          --------->ANAC58
-------ANAC46 --------->ANAC46         <---------MYB46(3)         <---------ARR14(2)
->RAV1(2)  --------->ARR14(2)         <--------P  ------>ZmHOX2a(1)                            <----
-------DEAR3(1)----------------->PIF3(1)       ------>ZmHOX2a(1)<---------ARR11(3)    --------->SPL7
------LBD16---------->TaMYB80       <---------MYB46(3) --------->ANAC46             <---------SPL7<-
 
gcggagtgaaggggaatatgccacgtggaaacgtgtaagtggttgttttcctcctcacaagtcacaacatattcgtgaaaaactctcggtacgattcgat  1547300
                              --------->MYB52(1)
                              ------>MYB83
          <----------DOF2     ------>MYB46(1)
    <-----------GT1         <---------MYB59         <------ZmHOX2a(1)                        <------
--------->LBD16          <-----------GT1    <---------DEAR3(1)      <---------LBD16         --------
-----GLK1(1)            ---------->DOF2  ----------->HVH21       ---------->DOF2           ---------
--------LBD16--------->AHL20(2)    <---------MYB52(1)        <---------TOE2(3)--------->TOE2(3) <---
 
ttccggttaacctcttttaaatcccattaaaccgaaccgtttttgcgacgctggaggagaagttgagataacgcggttttacataaatacccttataaaa  1547400
                                        --------->ARR14(2)
                                     --------->ANAC55(2)
                                     --------->ANAC55(1)
                                     --------->ANAC58
                                     --------->ANAC58
                                     --------->ANAC46
                                     <---------ANAC55(2)                                     -------
                                    <---------LBD16                                          -------
                                 <-----------HVH21                                     <---------MYB52(1)
---AHL20(2)            *TSS --------->MYB46(3)          ---------->ID1             ------->GAMYB----
->YAB1                 --------->TOE1(3)<---------ARR14(2)            <-----------GT1 <-------GAMYB
-->TBP<-----------GT1  --------->TOE2(3)<---------GLK1(2)         <----------DOF2 --------->ANAC46
---------CBF    --------->AtLEC2<----------DOF2         <---------CCA1(2)         --------->DEAR3(1)
 
attgagaaataacaaaaccattcaaaccctaaccactttcacggaacctcttcatcttcgtctctctgtcttttttcttctctcaacgccgttgattcgc  1547500
                                                                                           ---------
               <---------ARR11(3)                                                          ---------
      -------->P  <-----------GT1                                                          <--------
      --------->MYB52(1)                                                                  <---------AHL20(2)
   <---------DEAR3(2)                                                            <---------CCA1(2)
-->ANAC58      <---------GLK1(2)                                             <---------ANAC58
-->ANAC58    ----------->ARR10  <----------DOF2                  ----------->RAV1(2)      --------->AHL20(2)
----->DEAR3(1) --------->ARR11(3)   <----------DOF2        <----------DOF2   <---------ANAC58     <-
 
catcgtcgctaccggtgagattttccttcgattgtctttcttttattccatcaattcgctctctttccatctgggtttgtgcttgtagcttaaaaaaatt  1547600
                                                         <---------ZAT14
                                                        ------>ZmHOX2a(1)
                                                        --------->LBD16
                                                  -------->HAHB4
                                                  <---------ICU4
                                                  <--------ATHB1
                                                  --------->ATHB12
                            <---------ARR11(3)   --------->ICU4
                           --------->YAB1        <---------YAB1
>AHL20(1)                 <---------YAB1       --------->YAB1
>AHL20(2)             <---------ANAC55(2)     <---------YAB1
-AHL20(2)--------->ICU4   <---------TOE2(3) --------->YAB1                                    <-----
--------YAB1 ----------->GT1--------->ARR11(3)--------->ICU4                     <----------DOF2
 
gattatagagtcagaattgtttatcacttaagataatgagttctgagttataatgattcctgaactgatatgtagaaacttcaacttttatttgtttcta  1547700
                                                           <---------ANAC46
                                                           <---------ANAC58
                  <---------TOE2(3)                   <----------DOF2                              <
                  <---------TOE1(3)          --------->ARR11(3)          <---------ANAC58       ----
              <----------DOF2              ----------->ARR10             <---------ANAC58     ------
<-------TEIL <---------ANAC58          <------ZmHOX2a(1)   <---------ANAC58          <----------DOF2
------GT1    <---------ANAC58   <----------DOF2   ---------->ID1   <---------YAB1  ------>ZmHOX2a(1)
 
cgattcatccttgtttgctttagggttcttctattctttgtaggataagatttgtttctttggcttgtttatgtttgcttcttatcctctttattcatcc  1547800
                                                                       --------->ARR14(2)
                                                                       <---------ARR14(2)
                                                                      <---------CCA1(1)
                                                                      <---------GLK1(1)
                                                                      <---------RVE1(1)
                                                                     <---------ARR11(3)
                                                                     --------->ARR11(3)
                                                                    <------ZmHOX2a(1)
                                                                  <---------TOE2(3)
                                                                 --------->YAB1
           <---------LBD16         <---------TOE1(3)        --------->ICU4
  ----------->GT1                  <---------TOE2(3)        <---------YAB1
---------ZAT2                 <---------YAB1         <---------HSFB2a(2)
-->ZmHOX2a(1)               --------->YAB1           --------->HSFB2a(2)
----->RAV1(2)         ---------->ID1                <---------LBD16----------->GT1  --------->ANAC46
 
tgagcttgttatactggggaaacttgttgtattatactaaggtttctgtttctcttctggataatgaataaggatatttgctcaattacacaacttggaa  1547900
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AGI:  At5g05200.1   
Description:  ABC1 family protein. Identical to Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9ASX5;GB:Q9FHK3); similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT4G31390.1); similar to hypothetical protein OsJ_022658 [Oryza sativa (japonica cultivar-group)] (GB:EAZ39175.1); similar to hypothetical protein OsI_024505 [Oryza sativa (indica cultivar-group)] (GB:EAZ03273.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78034.1); contains InterPro domain ABC-1 (InterPro:IPR004147); contains InterPro domain Protein kinase-like (InterPro:IPR011009)
Range:  from: 1544008    to: 1547165    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g05210.1   
Description:  nucleolar matrix protein-related. similar to nucleolar matrix protein-related [Arabidopsis thaliana] (TAIR:AT2G27750.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71277.1); contains InterPro domain Surfeit locus 6 (InterPro:IPR007019)
Range:  from: 1547424    to: 1549792    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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