Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           ----------->GT1                                                        >>>>>>>>>TBF1                   <---------AHL20(2)             --------->AHL20(2)                   ------->MYC3                          --------->AHL20(1)             <---------AHL20(2)                <---------ALFIN1                         --------->AHL20(2)         <---------ZAT6                      ------->GAMYB                             --------->AHL20(2)         ----------->GT1        --------->TOE2(3) <-------MYC3                         <---------AHL20(2)   <---------YAB1            <-----------GT1 --------->RAP2.6(2)                 ----------->GT1   ----------->HVH21<-----------GT1         --------->MYB46(3)           --------->WOX13(1)     -----   ttgctgtgatagtgataaattttcacaaatttcacctaaaactgcaaccgcacatgaagaagaaaataacataaccaattagatagaaattaaattatcc  1367000                          --------->At4g35610                                              >>>>>>>>>MYB98                   <---------AHL20(1)                                                     ------>MYB46(1)                   --------->AHL20(1)                   --------->ANAC58                  ------>MYB83                   --------->ARR11(3)                   --------->ANAC58                  --------->MYB52(1)                  <---------AHL20(2)                    --------->ANAC46                <------------              <---------AHL20(2)                       --------->WOX13(1)               <---------MYB59          <---------ANAC55(2)                         ---------->DOF2     <---------AHL20(2)        --------->AHL20(2)<---------At4g35610    <-----------GT1   <-------TEIL         <---------MYB46(2) ---->TOE2(3) --------->AHL20(2)        --------->GLK1(2)    ----------->RAV1(2)  --------->YAB1   ataaacaaaattacatataaatattttgtgctgaatgtagagcatctaattttacatcaagcagcctgatacatatataaacaaacataacctaacttag  1367100                     <---------SPL7                    <---------ANAC58                    <---------ANAC55(2)                    ------>ZmHOX2a(1)                    <---------ANAC46                 <---------ARR11(3)                    <---------ANAC58                 --------->ARR11(3)      <------ZmHOX2a(2)     <-                   <---------------AtSPL8   <---------HSFC1(2)    --------->YAB1  --------->ARR14(2)                   --------------->AtSPL3   --------->HSFC1(2)    --------->AHL20(2)               <-                  <---------TGA2(2)   <---------MYB52(1)   =========================HOX2a_HOX2a  ----        <---------YAB1          <---------ETT(2)     <-----------ARR10      <---------ARR14(2)-------      --------->CCA1(2)         --------->ETT(2) <---------MYB59 <---------ATHB12<------ZmHOX2a(1) <- ---AGL15--------->YAB1<-------TEIL  <-------GAMYB  <---------GLK1(2)      --------->At4g35610-------   aaaacaagttatgagaactatgacgtacaatatgtagaccgttggaagttaccaaaatctcctcccaataaaaaatcagatcaggaaacgaagtaaactt  1367200     --------->ANAC46     --------->ANAC58     --------->ANAC58                                                          ----------->GT1 --------->ALFIN1                                                            ---------->DOF2 --------ANAC58                                                           <---------YAB1 --------ANAC46                                                         --------->YAB1 ----->MYB52(1)                                                        --------->ICU4 -->TOE1(3)--------->TOE2(2)                                       ------->GAMYB --------ANAC58  <---------ANAC46         ----------------->AGL1--------->MYB52(1) -->TOE2(3)--------->TOE1(2)      --------->YAB1    --------->ICU4--------->ANAC46         <---------   aacgtggacgaaacatgcgatgtgtttcatttacaatgagaattgccacaagtgataagtagtaatcaacgaaatgatgaaaagaaaaactgtttacctt  1367300               --------->TOE1(2)              ----------->RAV1(2)             --------->GLK1(2)             ------->TEIL            <---------ARR14(2)            --------->ARR14(2)            --------->ARR11(3)        --------->LBD16    <---------SPL7                                         <-----------GT1   <---------ANAC58                                <---------ZAT6              <----------DOF2   <---------ANAC58  --------->ANAC58        <---------------AtSPL8     <---------AHL20(2) --GT1--------->SPL7 --------->ANAC58        <---------------AtSPL3    --------->AHL20(2)      *TSS   gcatttcgtccgaagaacctggcactccttgtgaagaacaaattggagttgtactgtcaattttcttctcaaaataaatctcttttgtgatttgcgattt  1367400                                                           ------------>CBF                                                           --------->LBD16                                                          --------->ANAC58                       <---------ANAC58                   --------->ANAC46                       <---------ANAC58               ---------->DOF2                   <---------ANAC58                   -------->HAHB4                   <---------ANAC58                   <---------ICU4                  --------->ZAT2                     <---------ATHB51    --------->ANAC46                  --------->At4g35610          ----------->GT1   <-----------GT1                  <---------At4g35610        ---------->DOF2    --------->AHL20(2)<---------GLK1(2)                  <---------ZAT2           <----------DOF2--------->ANAC58  <---------ICU4                <---------ZAT18   <----------DOF2--------->AHL20(2)  <-----------HVH21    <-----------RAV1(1)<---------ANAC46---------->ID1--------->ICU4 <----------DOF2   gatgaaatgttggcacagtgagcttgcttaaatagacttttttcgcttaaagttaataatgcgcaattaactttcacatcatcacattctcttactgtct  1367500    --------->TGA2(2)   <-----------TGA1   <-----------HVH21  --------->ANAC58  --------->ANAC55(2)  --------->ANAC46                                                                         <------ZmHOX2a(2)  --------->ANAC58                                                                        --------->ARR11(3)  --------->ANAC55(1)       <------------MYB.PH3(1)                                       <---------ARR11(3)  <---------ANAC55(2)     --------->MYB52(1)                                             <------ZmHOX2a(1) --------->SPL7     <---------ANAC58                                               --------->ZAT6 <-----------STF1   <---------ANAC58                                              <---------YAB1 <---   tcatacgtcatcgcatctagtttcttactaacagtttttttgtttgttttgagttctcccaactagggcatgactcatgttcttatcagtaggatcattt  1367600                                                                                           --------->AHL20(1)                                                                                           <---------AHL20(2)                                                                                           --------->ARR11(3)                                                    --------->TOE2(3)                      <---------ARR11(3)                                                 <---------DOF5.7(2)                       --------->AHL20(2)                                                <---------WRKY12                        ------>MYB83                                                <---------WRKY38(1)                   <---------MYB59                                                <---------WRKY45                   <-----------GT1                                               --------->WRKY18(1)              <---------ICU4    ---                                              <-----------HVH21                --------->ICU4  ------                                          ---------->DOF2                      <---------YAB1 <------                                       --------->TOE2(3)                    <------ZmHOX2a(2) <------                                      ----------------->AG                ------->GAMYB ------>MYB46(1)                                      ----------------->AGL1            <---------TOE1(3)  <---------AHL20(1)                                      ===============================================================        --------->ZAT6 ------>ZmHOX2a(1)------>ZmHOX2a(1)               <---------TOE2(3) --------->AHL20(2) ------YAB1      <----------DOF2 <---------AHL20(2) --------->YAB1     <-----------GT1---------------   tgtttgtttgactctaattcttttcctgttttgttttaattcctaaaaggtcaacgataatttgataaatgtttaacgatcatttttaccaaatatatta  1367700                                                                                           <---------ANAC46                                                                                           ==========                                                                                           <---------O2                                                                                           <---------ANAC58    ----------->GT1                                                           ------>ZmHOX2a(1) ------->DOF2          <-----------RAV1(1)                                    <----------DOF2 --->YAB1        --------->ARR11(3)                             <---------AHL20(2)         <---------ANAC58 ---AHL20(2)     <---------ARR11(3)           <-----------GT1 <---------AHL20(2)           <---------TGA1a ---YAB1        --------->CCA1(1)   <---------AHL20(2)       --------->AHL20(1)         ----------->TGA1 =MADS_MADS     --------->RVE1(1)  --------->AHL20(2)        <---------AHL20(1)         ----------->HVH21 >AGL15   --------->YAB1 --------------->AtSPL8           <---------CCA1(2)   =======================bZIP_DOF   taaagtctgtaattagaaatatctcatgttgtacattttaaattcttttgacattttcgcatatatatttttaagaagtcctttttatatgtgacgtttg  1367800                                                                           <-----------HVH21                 <---------ARR14(2)                                     <---------At4g35610                 --------->ARR14(2)                                     --------->At4g35610                 --------->GLK1(2)                            <---------AHL20(2)        <----------DOF2         --------->ZAT14           --------->AHL20(2)       <---------------AGL15    <---------ZAT18           <---------AHL20(2)       <---------DAG2           --------->ZAT18<---------ANAC58      ---------->DOF2    ---------->ID1  --------->WOX13(1)         <---------ANAC46    <---------YAB1 ==================bZIP_DOF     <---------ZAT14<---------ANAC58--------->AHL20(2)   tgtttagtcccttttggagaatccatcaaactagtgaacttattctattccttgtgaaatttaaataatatgaaagctgtcaccaagaagtagaattagt  1367900  Previous    Next  AGI:  At5g04730.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46503.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 1364102    to: 1367395    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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