Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                            <--------                                                                                            ---------                                                                                           ------>NtERF2                                                                                          <---------ALFIN1                                                                                       --------->ANAC58                                                                                    <---------ARR14(2)                                                                                  <---------YAB1                                                                                <---------ICU4                                                                                --------->ATHB12                                                                                <--------ATHB1   <---                                                                                --------->YAB1   ----                                                                               <---------YAB1    <---       <------MYB83                                                            <---------ATHB12  ----       <------MYB46(1)            <----------DOF2                    --------->At4g35610------>NtERF2      --------->MYB111(2)         <---------DAG2                    <---------ARR14(2) --------->ANAC58      --------->MYB46(2)         <---------DAG2                     --------->GLK1(2)  --------->ANAC46      --------->MYB111(1)     <-----------GT1             ----------->GT1  --------->MYB46(3)    <---     <--------P            --------------->AtSPL8  --------->KAN4(2)--------->ARR14(2)<---------LBD16 ->ANAC58                <---------MYB52(1)      ------->TEIL      --------->RVE1(1)--------->ARR14(2) ->ANAC58         --------->GLK1(2)       <---------RAP2.6(3)  ---------->DOF2 --------->ICU4  ------   tggccaagtaggtgagagagaatcactgttatttacctttttgccctcatgtatattctctcgttaaaagtatctgaaccaatgattatccgccacgtag  1319000          <-------TEIL          --------->ZAT14 -ANAC46  --------->ZAT18 -O2      <---------ZAT18 >O2      <---------ZAT14                     <----------DOF2 ------ARR14(2)                               --------------------->WRI1 ----->ARR11(3)                           <---------ATHB12 ------ARR11(3)                          ------>MYB83--------->ARR11(3) ----->ARR14(2)                          ------>MYB46(1)                --------->LBD16 ------GLK1(2)                          --------->WOX13(1)            <---------LBD16 ----->ARR10                    --------->At4g35610  <---------ARR11(3)--------->LBD16         ------   atactctctgggtgcaccaagttgcaagagtagcatctaaaccaatcactttgaatatatccaagatgccatcccggttcaagtttttatcaagagtaaa  1319100                                       <------NtERF2                                   --------->ANAC46              ------->MYC3                              <---------ARR14(2)                 <-------MYC3                          <-------TEIL------>NtERF2              <-------MYC2                        --------->ARR14(2)                       ------->MYC2                     <--                        <---------GLK1(2)                       --------->ANAC46          <---------YAB1                        <---------ARR14(2)   --------->ARR11(3) --------->ANAC58      <---------ARR14(2)                  <---------ICU4   --------->ANAC58             --------->ANAC58      <---------GLK1(2)                 --------->ICU4  <-----------GT1<---------HSFB2a(2)                   --------->ARR14(2)       <---------YAB1--------->YAB1--------->ANAC58           <---------ALFIN1    <---------MYB52(1)- ---->DOF2     --------->YAB1 --------->ARR14(2)--------->HSFB2a(2)            --------->MYB46(3)<---   agttccattttcatttctcataatcagattcgtattcacgcgcctattatctcgaacttatccaacacgcgcgtttaatcaaccgttggattctcaatgg  1319200                                                                             <-------MYC2                                                                             ------->MYC3                                                                             <-------MYC3                                                                    <-----------HVH21                                                                  ------->MYC4                                                                  ------->PIF5                                                                  <-------MYC4                                                                  ------->MYC3                                                                  <-------PIF5                                                                  ------->MYC2                                                                  <-------MYC2                                                                  <-------MYC3                                                                  ------->PIF4                                                                  <-------PIF4                                                                 <---------TGA1a                                                                 <---------ANAC55(2)                                                                 --------->ANAC55(2)                                                                 =====================bZIP_bZIP                                                                 ==========================bZIP_DOF                                                                 --------->O2<-------PIF4                                                                 --------->TGA1a                                                                 <---------O2------->PIF4                                                                 ==========================bZIP_DOF                                                                ------------>OsbHLH66   <---------TGA1a                                                               <---------ALFIN1         --------->ANAC46                                                               <------------OsbHLH66    =============                                                              ------>NtERF2  ------->MYC4                                                              <------NtERF2  ------->MYC2                                                              <---------SPL7 <-------MYC4                                                             --------->RAP2.3(2)        =============                                                             --------->DEAR3(1)         --------->TGA1a                                                            --------->ATERF1(1)         --------->ANAC58                                                            <------NtERF2   --------->ANAC46                                                            --------->RAP2.3(1)      <---------ZAT18                                                            --------->ORA47(2)  ==================bZIP_DOF                                                           <---------ATERF1(1)  ---------->DOF2                                                           --------->At4g35610----------->HVH21                                                          <---------DEAR3(1)--------->ANAC55(2)                                                          --------->ANAC46  --------->TGA1a                                                          --------->RAP2.6(2)------->PIF5 <---------MYB52(1)                                                          <---------ATERF1(2)<-------PIF5 --------->DOF5.7(2)                                                          --------->DEAR3(1)--------->ANAC58      <--                                                         --------->RAP2.3(1)--------->ANAC58     ----                                <---------ANAC58         --------->ERF1     <---------TGA1a      ----                               <-------TEIL              --------->DEAR3(2) <---------ANAC55(2)  ----             <---------At4g35610<---------ANAC46        <---------ATERF1(1) =========================             --------->At4g35610<---------ANAC58     <---------ANAC58       ======================bZIP_bZIP       --------->AHL20(2)      --------->ABI4(2)     <---------ANAC58       ===============bZIP_DOF>>       <---------AHL20(2)  <---------DEAR3(1)       <---------STY1(2)       =========================      --------->AHL20(2)--------->DAG2      <----------DOF2------>NtERF2  <------------OsbHLH66  ----  <---------MYB46(3)   ---------->DOF2      ===============================bZIP_DOF  --------->ZAT18 -------DEAR3(1)    ----------->GT1         ==========================================bZIP_DOF <----- -------->At5g28300--------->DAG2        --------->ANAC46--------->MYB46(3)------->TEIL<---------TOE1(2) ------ORA47(1)   ---------->DOF2    <-----------GT1--------->STY1(2)   --------->AtLEC2--------->ANAC58   acggtggattaaattagctgaaaagtaaagcggtgcgttttacgcgcttcttctggctagccgccgcacgtgtcatgcacgtgatagcgcacgttagctt  1319300                                                                   --------->ANAC46                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                 ---------->DOF2                                                               --------->MYB46(3)                                                               <---------MYB55(2)        <----------DOF2                                       --------->ANAC58  <------------CBF                                            --------->ANAC58 =====bZIP_DOF                            <---------DAG2      --------->ANAC46 =====bZIP_DOF                          ------>NtERF2        ------>MYB46(1) -------WRKY18(1)                      --------->DEAR3(1)   <---------ALFIN1 ----->WRKY45                          --------->RAP2.3(3) <---------MYB111(2) ------->HVH21                       <---------ATERF1(1)   --------->MYB46(3) ----->WRKY38(1)                    --------->ANAC58       <---------MYB55(2) ==================bZIP_DOF         --------->ANAC58       --------->DEAR3(1) >>>>>>>>>>>>>>>LFY                 --------->ANAC46      --------->ANAC58 =====bZIP_DOF                    <---------ALFIN1        --------->ANAC58 ----->WRKY12                 <-----------GT1            *TSS------>MYB83 -----DOF2                   <-----------GT1       <---------GLK1(1)     <---------ATHB12   tgaccattgtcttttgttctctattagttttttaacacacgcccccttattcgatttctcacccacccaaagccactcactctctcttctctctctctga  1319400                                 --------->RAP2.6(2)                                <------NtERF2                               <---------At4g35610                               <---------ATERF1(1)                             <---------PCF2                             --------->ATERF1(1)                            <------NtERF2                            --------->ATERF1(1)                            <---------ATERF1(1)                           ------>NtERF2                           <---------MYB46(3)                          <---------ANAC46                    <------ZmHOX2a(2)               ------>ZmHOX2a(1)                         <---------LBD16                     --------->ARR11(3)             =========                   <---------At4g35610                 <-----------RAV1(2)                  ------>ZmHOX2a(2)                   --------->ZAT2--------->RAP2.3(2)  <------ZmHOX2a(2)                    ==========                   <---------ZAT2>>>>>>>>>AtERF-4    --------->ARR14(2)                   --------->AGP1                   <---------GLK1(1)           <---------RAP2.3(2)                        --------->ARR11(3)                <---------ANAC58--------->ATERF1(1)  <---------ARR14(2)                   <---------GLK1(2)                <---------ANAC58--------->RAP2.3(1) <------NtERF2                         <---------ARR14(2)            --------->HSFC1(2)--------->ARR14(2)   <---------MYB46(3)                     --------->ARR14(2)            <---------HSFC1(2)<---------ARR14(2) <---------LBD16                          <---------ARR11(3)   <-----------HVH21    --------->LBD16        --------->ANAC46                          --------->GLK1(1)  --------->bZIP60(1)   ------>NtERF2          <---------RAP2.6(2)       <---------DEAR3(1)<------ZmHOX2a(2)  --------->bZIP60(2)  <---------DEAR3(1)     <---------LBD16<---------ARR11(3)          <---------GLK1(1)  <---------bZIP60(1) <---------LBD16         <---------At5g28300  <---------TGA1a      ----------->ARR10   agcgatgtcatcgacgtttcgagctccggcgggagccgctactgtgtttacggcggatcagaagatcagacttgggaggctcgacgctctgagatcctct  1319500                                  --------->ATERF1(1)                                  <------NtERF2                                 <-----------HVH21                                 ------>NtERF2                                 <---------SPL7                                <---------ANAC58                                --------->DEAR3(1)                               --------->RAP2.3(1)                              <---------DEAR4(2)                              <---------ATERF1(1)                              <---------ORA47(2)                              <---------RAP2.6(1)                              ------>NtERF2                              <---------RRTF1(1)                              <---------RAP2.3(1)                             <---------RAP2.3(2)                             --------->DEAR3(1)                             <---------ANAC46                             <---------DEAR3(1)                             <---------RAP2.3(3)                            ------>NtERF2                            <------NtERF2                            --------->RAP2.3(1)                            --------->ATERF1(1)                            <---------ABI4(1)                           <---------RAP2.3(1)                           <---------DEAR4(2)                           <---------ATERF1(1)                          <---------DEAR3(1)                         --------->ATERF1(1)                                                        <                         <---------LBD16                                                           --                  --------->CCA1(2)                                                                --                 <---------ARR14(2)                                                               ---                 --------->ARR14(2)     <---------ARR14(2)                                        ---                 <---------ARR11(3)     --------->ARR14(2)                                        <--                 --------->ARR11(1)   --------->LBD16                                    <---------ALFIN1                 --------->ARR11(3) <---------LBD16        --------------------->WRI1   <---------ZAT14               ----------->ARR10<---------ANAC58     <----------DOF2                <---------RAP2.6(3)             <------ZmHOX2a(1)<---------ERF1   ------>ZmHOX2a(1) <---------ARR11(3) <---------ATERF1(1) ===================HOX2a_HOX2a<------NtERF2------>ZmHOX2a(1)    --------->ARR11(3)--------->RAP2.6(2) ===================HOX2a_HOX2a--------->ATERF1(1) <---------At4g35610          --------->ANAC46  <--   cattctgttttcttaggaagatatggacgcggcggcgtcccggttcctccttccgcttcttcgtcgagttcttcgcctattcaagccgtctccactgtaa  1319600                                                                                                  ---                                                                                               ------                                                                                              <------                                                                                              ------- -------TEIL            <---------YAB1                                                        ------- ------->CCA1(2)      --------->YAB1                                                          <------ ------->ARR14(1)    <---------YAB1                                                           <------ ------>ARR11(1)  <---------AHL20(2)                  ----------->GT1                        -------- ------>ARR14(2)  --------->AHL20(2)       <---------At4g35610<-------TEIL                   -------- -------GLK1(2)--------->ATHB12 --------->ANAC46    ----------->GT1      <---------DAG2      <------- -------ARR14(2) <---------WOX13(1)      <-----------------AGL2          <----------DOF2     <-------   gattcgatacctgctcttgatttattatagttacaaggagttttctgcttatggtcgtgaaaaattcatgagatgctttttgaatcgccttcacgaatat  1319700        <---------AHL20(2)    <---------AHL20(1)    --------->AHL20(2)    <---------AHL20(2)                          <---------ICU4             <---------ZAT2    -------- ------>TOE2(3)                   <---------ARR11(3)                       --------->ZAT2  --------->YAB1 --->KAN4(2)                      --------->ARR11(3)                       <---------At4g35610------- ----TaMYB80                    <---------YAB1  -------->HAHB4            ------->TEIL     <---------ICU4 -->KAN4(1)                   <---------ICU4    --------->ATHB12       <---------REM1(1)  --------->ICU4 -->HSFB2a(1)                <---------YAB1     --------->YAB1     <---------WOX13(1)     <---------ATHB12 ---HSFB2a(1)             <---------YAB1       --------->ICU4    --------->ATHB12 <---------ANAC46 ---KAN4(1)            --------->GLK1(2)       <---------YAB1    <---------ICU4   <---------ANAC58 -->TaMYB80           <---------GLK1(2)  <---------ZAT6       --------->YAB1 <----------DOF2 <------- ->ARR14(2)     <---------At4g35610 --------->TOE2(3)        <---------YAB1--------->At4g35610------- --ARR14(2)     --------->At4g35610<---------YAB1 <---------YAB1<---------YAB1    ----------->GT1 --KAN4(2)<---------TOE2(3)  --------->ICU4    <---------ATHB12 --------->ICU4    <---------ANAC58<--   tcttaaaaaatttatgttatctgagattctgattattatcttagtggaaatgattactggattatgataattgatgcagctgtatcgtgaaaatcattat  1319800                                            <---------AHL20(2)    <---------MYB52(1)                 <---------AHL20(2)             ---------->DOF2   ----------->GT1                  <---------AHL20(2)               --------->CCA1(2)  --------->MYB59                   <---------AHL20(1)              <---------ARR11(3) ->ICU4                             --------->AHL20(1)              --------->ARR11(3) -->ATHB51          --------->YAB1  --------->AHL20(2)       <---------AHL20(2) --YAB1        <---------ANAC58   <---------TOE2(3)         --------->AHL20(2)<-----------HVH21 -->AHL20(2)   <---------ANAC58<---------YAB1            <------ZmHOX2a(1)   --------->ALFIN1  <----- -------AHL20(2)<----------DOF2<---------WOX13(1)      <---------TOE2(3)     <---------ZAT6   -------   ttattcggtaattcatagcttttcatattggtgattaatattttatgaaattgagtttaggattaaataagatatagcagtgtgagagagagagagattc  1319900  Previous    Next  AGI:  At5g04590.1    Description:  SIR (sulfite reductase); sulfite reductase (ferredoxin). similar to NIR1 (NITRITE REDUCTASE), ferredoxin-nitrate reductase [Arabidopsis thaliana] (TAIR:AT2G15620.1); similar to sulfite reductase [Nicotiana tabacum] (GB:BAA33531.1); similar to sulfite reductase [Pisum sativum] (GB:BAD12837.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN79174.1); contains InterPro domain Sulphite reductase, ferredoxin dependent; (InterPro:IPR011787); contains InterPro domain Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; (InterPro:IPR005117); contains InterPro domain Nitrite and sulphite reductase iron-sulphur/siroheme-bin Range:  from: 1319357    to: 1322527    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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