Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->YAB1     <---------ATHB12   --------->WOX13(1) ------TOE2(2) ------TOE1(2) --->TEIL--------->AHL20(2) ---ANAC46 ---ANAC58 ---ANAC55(2) ---ANAC55(1)                                                                         --------->At4g35610 -->ANAC55(2)                                                                         <---------At4g35610 ---ANAC58          --------->WRKY18(1)                                      --------->ZAT6 --TOE2(3)     ---------->DOF2                    <---------At4g35610      --------->MYB52(1) -DOF5.7(2)   <---------AHL20(2)              --------->ALFIN1             --------->YAB1   atgttcaatcataaatttaaaggtcaagtttgacatatttttcaaagtttggggctgtcattacagtattcattcaataacagtactgggctgaattgca  1286500                                                  <---------ANAC46                                                  <---------ANAC58               <---------ANAC46          <-----------GT1         --------->HSFB2a(2)          <------ZmHOX2a(1)          <---------AHL20(2)  <-----------GT1      ------>ZmHOX2a(1)      ---------->DOF2    <---------At4g35610      <---------ANAC58  <<<<<<<ZML2  <----------DOF2   --      --------->MYB52(1) --------->At4g35610  <---------MYB52(1) <---------HSFB2a(2)           ------   gtttgggctaaaggacgacttgtattgggctgaacttgtttaatgaccgtttgtgtgttatacaatactagaacacagtcctactttgaaacaccaaaaa  1286600                                            --------->ANAC46                                      ---                                            --------->ANAC58                                     ----                                            --------->ANAC58                                ---------             ------->GAMYB                --------->AtMYB61                            --------------            --------->ANAC46             --------->MYB46(3)                      <-----------GT1 <---            --------->ANAC58           --------->ANAC46                  <-----------GT1    --------- --------->GT1                       --------->MYB46(3)                 --------->AHL20(2)  --------- ---->DOF2  --------->ANAC58    --------->ANAC46                        <---------AHL20(2) ------->TEIL   agagtagaaattcaacgcaaattgtgaagaacacacagaacaaaccacacaatatgtactagcacaaaccagaattaaacatttaacaatatgtactcaa  1286700                                                                                        <---------ICU4                                                                                        <---------AHL20(2)                                                                                        --------->ATHB51                                                                                       --------->ICU4                                                                                     --------->ATHB51                                                                                     --------->YAB1                                                                                     <--------HAHB4                                                                                  --------->YAB1                                                                                  --------->TOE2(3)                                                        <---------TOE2(3)     --------->YAB1                                                       --------->MYB52(1)  --------->YAB1 ---->GAMYB                                 <---------ICU4             --------->AHL20(1)    <------- ----->MYB46(3)                             --------->ATHB12           <---------AHL20(1)  <---------AHL20(2) >ANAC58                                    --------->ATHB51          --------->AHL20(2)--------->AHL20(2) ->AtSPL8    <---------ARR11(3)            --------->ICU4           --------->AHL20(2) <---------YAB1 ------MYB52(2)                            <---------YAB1         <---------AHL20(2) <---------ICU4 >ANAC46     --------->ARR11(3)          --------->YAB1<---------DOF5.7(2)<---------AHL20(2)<-------- >ANAC58    <---------CCA1(2)            --------->TOE2(3)        --------->AHL20(2)--------->ICU4   caaaccagaatgctatatctactagactactagtagtatagaaccataattgcacattaacgaaatataaaaatatataatcatccataattatttattg  1286800                                                                                           ==========                                                                                           ----------                                                                                          <------ZmHOX2a(2)                                                                                          --------->CCA1(2)                                                                                         --------->ARR14(2)                                                                             ---------->DOF2                                                                       --------->YAB1    --------->AGP1                                                                       <---------ICU4    --------->ARR11(3)                                                <------------CBF   *TSS--------->ATHB12  <---------ARR14(2)                                      --------->ATHB12         --------->TOE1(2) <----------ID1 -----CBF                            <---------YAB1    <------------CBF-------->ATHB1---------->DOF2 -AHL20(2)------->TEIL               --------->ICU4<---------MYB46(3) <---------ATHB12   <---------ARR11(3)   tattttggaatgaatctaaatttaagcctaagcctagtaatgagtgagagcattggttattgaatcgaacgaatcattgcaaagagccaaagatccaaaa  1286900                                                                                                  ---                                                                                                  <--                                                                                                  ---                                  ---------->DOF2                                           <--------  ----------->RAV1(1)          >>>>>>>>>TBF1                                                --------- =====================================MADS_MADS                         ------>ZmHOX2a(2)  <---------CCA1(2) ------->AGL3         --------------->AGL15 <-----------HVH21     <----------DOF2        <---------CCA1(2)   tttgcaacaaaaacaaaaactctaccaagtgaagaagaaagagaagtgtcacatctctctctctatctctttgatccaaacaaattccctcatatatctc  1287000                                                                                           <---------MYB55(2)                                                                                           --------->MYB46(3)                                                                                          ------>MYB46(1)                                                                                        <---------ALFIN1                                                                                        <---------MYB111(2)                                                                                        --------->DEAR3(1)                                                                                        --------->AtMYB61                                                                                       --------->MYB46(3)                                                                                     --------->DEAR3(1)                                                                                     <---------ALFIN1                                                                                     --------->AtMYB61                                                                                    --------->MYB46(3)                                                                                  <---------ALFIN1                                                                                  --------->AtMYB61                                                                                  --------->DEAR3(1)                                                                                 <---------MYB55(2)                                                <---------DAG2                   --------->MYB46(3)                                                <----------DOF2                 ------>MYB83---------                                            ---------->ID1                      ------>MYB46(1)                                           <-----------GT1                  --------->PCF2------>MYB83 ------>ZAT14                             <-----------GT1                  --------->ARR14(2) -------At4g35610                        <---------AHL20(2)  <---------GLK1(2) --------->ANAC46 ------>At4g35610                <---------ATHB12   <---------YAB1         <---------ARR14(2) -ARR11(3)            <----------DOF2 <---------ARR11(3)  --------->HSFB2a(2) --------->MYB46(3) >ARR11(3)            <---------DAG2  --------->ARR11(3)  <---------HSFB2a(2)--------->DEAR3(2)   tgctctctcttcccaatattcttcctttttcttcaatcgagattttatcgctttttgattcgagaatttcgaaatcggaacccaccaccaccaccctcca  1287100              --------->MYB52(1)           <------ZmHOX2a(2)          <---------ARR14(2)          --------->AGP1     ------>NtERF2                <---------AHL20(2)     ----------->RAV1(1)         <---------YAB1     --------->MYB52(1)         <---------AHL20(2)                                             ------   <------NtERF2           <---------YAB1                                                 <---------WOX13(1)  ------>NtERF2         <---------YAB1                                                  --------->ATHB12 >ANAC46  --------->ARR14(2)  <---------YAB1        <----------DOF2                   <---------WOX13(1)   tcgtcgccaacagatccaacggttctctgattatttttatttgaaaattgtcttctttgttctccctctcgctgggtttgattctgagattgattaatct  1287200                                 <-----------RAV1(1)             <---------ANAC58           ------->GAMYB                          --------->DAG2                         <---------ANAC58        --------->MYB52(1)   <-----------HVH21     --------->DAG2                      ---------->DOF2           --------->MYB46(3) --->TOE2(3)            ---------->DOF2             --------->GLK1(2)            --------->GLK1(1) <-   aaatgggtcgcatcgagatttagaagaaaagggaaatgttggcaatggagaaagaatttgattcaaagcttgttcttcaagggaactcatccaacggtgc  1287300                                                                                        <---------MYB46(3)                                                              <-----------------AG      <------MYB46(1)                                                              <-----------------AGL1    <------MYB83                                                          --------->ATHB12             <---------AtMYB61                                                          <---------ICU4      ------>ZmHOX2a(2)                                                     ------>MYB46(1)         <------ZmHOX2a(2)                                                    --------->ANAC46         --------->CCA1(2)              ---------->DOF2                       --------->ANAC58        <---------AGP1          --------->ANAC58                          --------->ANAC58        --------->AGP1          --------->ANAC58                         --------->MYB46(3)       --------->ARR11(3)      --------->HSFB2a(2)              --------->ANAC58  <---------YAB1     <---------ARR11(3)      --------->HSFC1(1)               --------->ANAC58  --------->ICU4     --------->ARR14(2)      <---------HSFB2a(2)   ---------->DOF2       <---------At4g35610       <---------ARR14(2)      <---------HSFC1(1) <----------DOF2        <-----------GT1   --------->ARR14(2)  <--------P----- --------TOE2(3)  <---------GLK1(2) ------>ZmHOX2a(1)------>MYB83 <---------ARR14(2)--------->ALFIN1   taatgtttctagaagcaaaagcttctcctttaaagctcctcaagaaaatttcaccagccatgatttcgaatttggcaagatctatggtgttggttcttac  1287400  Previous    Next  AGI:  At5g04510.1    Description:  PDK1 (3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1); kinase. similar to 3-phosphoinositide-dependent protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G10540.1); similar to 3-phosphoinositide dependent protein kinase 1 [Zea mays] (GB:ABB71956.1); similar to 3-phosphoinositide-dependent protein kinase-1 [Lycopersicon esculentum] (GB:AAW38936.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17976.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains I Range:  from: 1286867    to: 1289909    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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