Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ANAC46                                                     <------NtERF2                                                   <---------DEAR3(1)                                             --------->AtMYB61                                            --------->MYB46(3)                 --------->GLK1(1)          <---------ABI4(2)                 <---------GLK1(1)     --------->ANAC58          --------->TOE1(3)      <---------ANAC46<-------GAMYB          --------->TOE2(3)    --------->At4g35610<---------MYB52(1)       <-----------GT1       XXXXXXXXXXXXXXXXXXXX>MIR2937 <---------TOE1(3)        --------->CCA1(2) <---------MYB55(2)      --------->ANAC58 <---------TOE2(3)    --------->LBD16  --------->ANAC58             --------->ANAC58    <---------O2   ttcaaggtttaaccttgagaaacccgagataagagctgtgtaagaaaccaccgttggcgaagacagagacacgaagacgagaatagcttcacgagggaaa  1013200                                                                         --------->ZAT18                                                                         --------->ZAT14                                                                         <---------ZAT14                                                                      <---------ANAC46                                                                      <---------ANAC58                    --------->MYB52(1)                                <---------ANAC58        -------                   --------->CCA1(2)                   --------->At4g35610                    <------                <---------ZAT6----------------->AG     <---------At4g35610      <----------DOF2  <---      <---------TOE2(3)    --------->GLK1(1)<-----------GT1    --------->MYB52(1)     <-----------GT1   ccaagtttgagataagtagagataagggcatttccaagacgggttttttcttctctgagcttaagaaacgaagcgtgcacagcttttgttacctcgacgt  1013300                                                                      <----------DOF2                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                             <---------ANAC58 -->O2  --------->At4g35610           <---------ATHB12 <---------ARR11(3)                 >>>>>>>>>TBF1 ---O2  <---------At4g35610----------->GT1        <-------TEIL <---------MYB52(1)      >>>>>>>>>TBF1 ------ANAC46        <---------At4g35610   --------->MYB52(1)<---------ANAC58 --------->SPL7   cgtggtattgagcagacaatcgaagcagatagaaaaacccatcaataacagattcaatgtcttccgtttcttctttatcgaacgatgaagaagaagaaga  1013400                          <---------ANAC58             <-------TEIL <---------ANAC46          --------->KAN4(1)     ---------->DOF2          ---------->DOF2         <---------KAN4(2)<---------ANAC58   --------->ANAC58   <---------ANAC58     >>>>>>>>>TBF1   <-----------RAV1(1)     --------->ANAC58   <---------ANAC58 <------ZmHOX2a(1)   <---------MYB46(3)     <-----------------------TaNAC69(2)                 ------   tgaggaagaagaacattcatggattgttgctggtgaaagagacagagacgcagagagagcaaagaggcgttctggttttcgatagagggagagagaagaa  1013500                                                                          <---------ETT(2)                                                                     <---------TOE2(3)                                                                --------->ATHB12                                                     <------ZmHOX2a(1)   --------->ALFIN1                                           <------ZmHOX2a(1)   --------->ICU4                                     --------->CCA1(2)         <---------YAB1        *TSS                      <------ZmHOX2a(1)   ----------->GT1    --------->YAB1    <---------YAB1              --------->ARR11(1)    --------->ARR14(2)      --------->ICU4<---------ZAT18             --------->ATHB12       <---------ARR14(2)  <------NtERF2<---------At5g28300        <---- ---->DOF2  <---------YAB1      --------->ALFIN1   <---------TOE2(3)--------->MYB52(1)------->TEIL   agaagtttgggacgatgattcggaggaattgaaggtgggatatgaggaaaattgaggaggcagtgatgattaacggtggacatgaatgaatttttgagct  1013600                                                                                           <---------TOE2(3)                                                                                     <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(1)     <------NtERF2                                                             ------------>CBF    <---------ATERF1(1)                                                       --------->ANAC58    ------>NtERF2                                                             --------->ANAC58   <---------DEAR3(1)                        <-----------GT1 <------ZmHOX2a(1)--------->ANAC46  <---------ZAT18                            <---------AHL20(2)              --------->WOX13(1) ----- ------DOF2            <-----------GT1---------->ID1<---------At4g35610    <---------ATHB12<---------TOE1(3)   tttgggcgcctaaatcgccatggataaacctttctcacttgttctatttacttcagaagagaaggaccatttttgtaatcaagcaatttatttaaggtcc  1013700                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                           --------->MYB52(1)                     ---                                                           <---------ARR14(2)                     ---                                                           --------->ARR14(2)           <---------AHL20(2)                                                         --------->LBD16               <---------AHL20(2)                                                        --------->ANAC46            --------->AHL20(2)                                                        --------->ANAC58            <---------AHL20(2)                                                       <---------LBD16             <---------AHL20(2)                                                       --------->LBD16             <---------AHL20(1)                             <----------DOF2       --------->ARR14(2)              --------->AHL20(2)                 <-----------GT1                   --------->ARR11(3)       <-----------GT1     -----              <---------ARR11(3)                   <---------ARR11(3)   --------->AHL20(2)   <-------              --------->AHL20(1)                   <---------ARR14(2)  <---------AHL20(2)   ---------              --------->ARR11(3)                  --------->RVE1(1)<---------AHL20(2)  --------->AHL20(2)             --------->AHL20(2)           <---------YAB1--------->ANAC58<---------AHL20(2)<---------YAB1 ------------>AGL3<-------TEIL   <---------YAB1   --------->CCA1(1)--------->ICU4  --------->AHL20(1)   ctatattagtgggaaatatatacatttcgctctttactattgatatgatcaaatatccccgtaactgaaattatttatttacaaatttatttattaaaga  1013800    --------->YAB1    --------->AHL20(2)    <--------ATHB1    <---------ICU4    --------->ATHB51                                                   <---------ARR11(3)   <---------ATHB51     ----------->GT1     <---------ATHB12           <---------AHL20(1)   <---------ATHB12  <----------DOF2    --------->MYB46(3)             --------->ARR11(3)   --------->ICU4   --------->TOE2(3)  ------>MYB83                 <------ZmHOX2a(1) ------>ANAC58   ------>MYB83  --------->YAB1                  <------ZmHOX2a(2) ------>ANAC58   ------>MYB46(1)       -------->P             <---------ARR11(3)         --------->YAB1 ----->DOF2    --------->AtMYB61       ------>MYB46(1)        --------->ARR11(3)        <-------TEIL --TOE2(3)     <---------MYB59 <---------ICU4--------->ATHB12------->GAMYB    --------->YAB1 ->DOF2<-----------GT1<---------MYB52(1)<---------ATHB12  <-----------GT1   <-----------GT1       <--   aagcaataatttccaaaccaaacctttagttaataatctccaaccattcattgaactatataacgatctaggatatattttcatcatatattcatatttt  1013900                                                                                               <-----                                                                                            ------>NtERF2                               <------MYB83           <---------ANAC58                   <---------ANAC58                               <------MYB46(1)        <---------ANAC46                   <---------ANAC58                              --------->MYB59         <---------ANAC58                   --------->At4g35610                         --------->DAG2      <---------ANAC46                       --------->ATHB12 ---------GT1           ---------->DOF2 --------->CCA1(2)                          <---------YAB1   tgactgtttgagtcaatgttttggaataaagttaggtttaagagatgaggggtattccttggacaagaagattatttgcgataacacgattggctgcctc  1014000                                                      --------->At1g77200                                                      --------->DREB2C(2)                                                      --------->DEAR4(1)                                                      --------->DEAR3(1)                                                      ----------->HVH21                                                      <---------ETT(1)                                                      ------->GAMYB                       --------->ANAC46              --------->DEAR3(2)                       ----------->GT1               --------->MYB46(3)                       <---------ANAC55(2)          --------->MYB52(1)                          -----                       --------->ANAC55(1)          ------>MYB46(1)                            ------                       --------->ANAC58             ------>MYB83               <---------HSFB2a(1)                       --------->ANAC58            --------->MYB55(1)          --------->HSFB2a(1)  -                       --------->ANAC55(2)         <---------ALFIN1            <---------HSFC1(2) ---             ------>MYB46(1)                      --------->MYB46(3)           --------->HSFC1(2) <--             ------>MYB83                       ------->TEIL            <------ZmHOX2a(1) ------->TEIL ----LBD16 --------->AtMYB61     <---------TOE1(2)<---------MYB55(2)--------->TOE1(2)    <-----------GT1   ggatggatgaaaaccatcccaaaacacgtaattcgtagcattcgagcatgtacccaccgacaatgcattacataggaacgaagtttccattgtacccgtt  1014100  Previous    Next  AGI:  At5g03800.1    Description:  EMB175 (EMBRYO DEFECTIVE 175); catalytic. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G16860.1); similar to hypothetical protein OsJ_022333 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16012.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82063.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 1010779    to: 1013585    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g03810.1    Description:  carboxylesterase. similar to GDSL-motif lipase/hydrolase family protein [Arabidopsis thaliana] (TAIR:AT5G03820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16014.1); contains InterPro domain Lipase, GDSL; (InterPro:IPR001087) Range:  from: 1013938    to: 1015344    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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