Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------>ZmHOX2a(1)      ------>ZmHOX2a(1)    ------>ZmHOX2a(2)   <------ZmHOX2a(2)   =============HOX2a_HOX2a                         <---------ANAC46  --------->ARR14(2)                                <---------ANAC58  <---------GLK1(2)                                 <---------ANAC58  --------->ARR11(3)                        --------->HSFB2a(1)  --------->AGP1                            --------->HSFC1(2)  <---------ARR11(3)                        <---------HSFC1(2)                <---------ANAC58  <---------ARR14(2)                     ------->GAMYB                        <---------ANAC58 ------ -----DOF2                            --------->MYB52(1)         <----------DOF2           --------->At4g35610 -->ARR14(2)                      --------->ANAC58  <-----------RAV1(1)       <---------ANAC46<------ ---ARR14(2)  --------->ZAT6      --------->ANAC58  --------->ALFIN1--------->YAB1   <---------YAB1   tacagatcctcctctatcagtagtctcactagtcccaagacaacgacgcttcttgtgtggcacatctctttcatcacattgtgtgttttcattagcttca  1000600                                            --------->At5g28300                                           --------->TOE2(3)                         --------->WOX13(1)--------->YAB1           <------ZmHOX2a(1)               ------->GAMYB                              ------->GAMYB     ----------->HVH21 <---------ATHB12    --------->ANAC46                           --------->AtMYB61   ------>ZmHOX2a(1) --------->GLK1(1)     --------->TOE1(3)               <---------AHL20(2)      -- --->REM1(1)  <---------WRKY18(1)  <-------TEIL <------------MYB.PH3(1)   --------->AHL20(2)   ------ -TEIL ---------->DOF2 --------->ICU4  --------->MYB46(3)        --------->GLK1(1)   --------->MYB46(3)   tcatcctgtgaaaggatgaccagaaatcattcacaaatacatcaaccgtaacagtttctatttcgcgagttccaaatttaaaattcaacctccacaatca  1000700                            --------->TOE2(2)                  <---------YAB1                                       <-----------RAV1(2)             --------->ANAC58                                   --------->At4g35610   --------->GLK1(2)        --------->TOE1(2)                   <---------At4g35610--------->ANAC58   --------->ARR14(2) --------->YAB1                           ------->TEIL        --------->ANAC58  <---------GLK1(2)  <---------YAB1       --------->YAB1    <---------REM1(1)  <-----------GT1 ------->ANAC46 <----------DOF2     --------->YAB1     --------->WOX13(1) <------ZmHOX2a(1)        -- --->YAB1    --------->ANAC58  --------->ANAC46----------------->AGL2----------->RAV1(1)          <--   cacagaatccaaaacaagctttgattataacatacgaatcaaaatcaaaaccaaaatcagtcatgtagctgcaccaggaaattacaagctctagttttcc  1000800                                                                                          -------->P                                                                                         --------->MYB52(1)                                                                                         ------>MYB83                                                                                         ------>MYB46(1)                                                                                        ----------->HVH21                                                                                       <---------MYB59                                                                                       --------->AtMYB61                                                                                       <---------MYB46(2)                                                                               --------->LBD16                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                          <---------GLK1(1)                               <----------ID1                             --------->GLK1(1)    ------                      --------->ANAC58                                   --------->ARR14(2)  --------                      --------->ANAC58                                   <---------ARR14(2)<---------LBD16                    ---------->DOF2                              <---------ARR14(2)  <---------ARR11(3)                  <---------HSFB2a(2)                   --------->HSFB2a(2)   <---------ANAC46 <-----   ---------->DOF2--------->LBD16                       <---------HSFB2a(2)  <---------LBD16--------- ------->GLK1(2)  --------->HSFB2a(2)     --------->ANAC58       --------->ARR14(2)  --------->ARR11(3) -------GLK1(2)  <---------ANAC46         --------->ANAC58       --------->GLK1(2)   <-----------ARR10   gattctaaaggagactgttccgagaagcaaatagagacgaagggaagaaataggtttaccagaagcgaatcgagggatttgcgcgaagacctaaccggaa  1000900    <------MYB46(1)    <------MYB83                        --------->YAB1 --->ARR14(2)                           <---------ICU4 ->LBD16                             --------->WOX13(1) ----ARR14(2)               <---------GLK1(2)                                          ----------->GT1 >ANAC46              ----------->HVH21<---------ATHB12 <---------YAB1              ----------->TGA1   tcgatttggttctcatcttcatcttcgacagtttcttctcaatcatcagtctcggtttaaaattggcactctcgaattcaacaatggggacgttatatga  1001000                                      <------ZmHOX2a(1)                                    <---------TOE2(3)                              --------->ZAT14                               ----------->GT1                              <---------ZAT14                            <---------ANAC55(2)                              --------->ZAT18                            --------->ANAC55(2)                             <---------ANAC58                    --------->DAG2                             <---------ANAC58                   ---------->DOF2        --------------  --------->ZAT14           *TSS--------->SPL7               --------->AHL20(2)--------->AHL20(2)  <---------ZAT14      <---------------------WRI1           --------->AHL20(2) <---------AHL20(2)   acagtgaagagtgtctcttctcaattgtgaagcgtactgaggaagatggatgaataaacaaaataaaaaagtattatgtgataaatttagcaaatataga  1001100                                                                           <---------DAG2                                                                           <----------DOF2                                                                       <-----------GT1                                                                      <---------AHL20(2)                   <---------AHL20(1)                             <---------AHL20(2)                   --------->AHL20(2)                            --------->AHL20(1)                   --------->AHL20(1)                            <---------AHL20(2)               --------->AHL20(2)                                <---------ARR11(3)               <---------AHL20(2)                                --------->AHL20(2)   --------->AHL20(2)              --------->AHL20(2)                                 <---------AHL20(1)   <---------AHL20(2)            <----------DOF2    --------->GLK1(1)          --------->YAB1<-----------GT1          ----           <---------DAG2 <---------LBD16        ------->TEIL    --------->ARR11(3)  <---------AHL20(2)  ------------>CBF <---------AHL20(2)      <---------AHL20(2)   --------->AHL20(2)<---------AHL20(2) ->AGL15<-----------GT1--------->YAB1     --------->AHL20(2)  --------->AHL20(2) <---------AHL20(2)--   agaagtcaattcaccttttaattaattatacggataacccaaaattttatgtatattgaatcaaaaatatattttaacttttttttatttatttagaatt  1001200                                                                   --------->TOE2(3)                                                                 <---------AHL20(2)                                                       <---------AHL20(2)                                                  --------->AHL20(1)                                                  <---------AHL20(1)       <-----------GT1                            <---------ARR11(3)  --------->MYB52(1)         <---   <---------AHL20(2)       <----------DOF2   --------->YAB1  <---------ICU4                    -----  --------->AHL20(1)        --------->TOE2(3) <---------ICU4 --------->ICU4              --------->YAB1  <---------AHL20(1)        --------->TOE1(3)--------->ICU4--------->YAB1               <-------TEIL ----->AHL20(2)  <---------AHL20(2)          <---------ATHB12<---------YAB1        <-----------GT1 ------->AHL20(2)--------->AHL20(2)     <---------ZAT6--------->AHL20(2)    ---------->DOF2    <-----   tttatatatttactgacattaaaatttcaactttaaacaatagtgtaatcaatatataaaatcataattcattaacagaaaagttttacattcgtaaatg  1001300                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                 ----                                                                                                <----        <---------WOX13(1)                                                                  <--------     <---------AHL20(2)                  <---------AHL20(2)                               <-------GAMYB     <---------YAB1                --------->ANAC55(2)                                    <---------At4g35610 <----------DOF2                   <---------ANAC55(2)              ------->TEIL        <---------ANAC46 ------GLK1(2)               --------->AHL20(2)                 <-------MYC3            --------->ETT(1) --->HAHB4                   <---------AHL20(2)                 ------->MYC3          <-----------HVH21 ----ATHB12                 --------->AHL20(2)              <-------TEIL             <-----------RAV1(1)   attctttttaattgacttaaattcttgaaaataaatcacatatttttttgacgcataaaacatacacatgtatatactagagactatatgtcggatgatt  1001400         <---------ICU4         --------->AHL20(2)         --------->ATHB51         <---------AHL20(2)        --------->ICU4                                                  <---------AHL20(2)      <--------HAHB4                                                    --------->AHL20(2)      --------->ATHB51                                              <---------AHL20(2)      <---------ICU4                                               <---------ARR11(3)      -------->HAHB4                                               --------->ARR11(3)      <--------ATHB1                                               --------->AHL20(1)     --------->AHL20(2)                                            --------->AHL20(2)     <---------ATHB51                                              <---------AHL20(2)     <---------YAB1                                            <---------AHL20(2)     --------->ICU4                           --------->YAB1   <---------ICU4          <---------YAB1   --------->YAB1                          --------------->AGL15   <---------AHL20(1)<---------ICU4  <---------YAB1                     <---------ICU4           --------->AHL20(2)     --------->YAB1 -------->YAB1  <----------DOF2     <---------AHL20(2)      --------->YAB1      --------->AHL20(2) ---------ICU4  <---------DAG2      --------->AHL20(2)    --------->AHL20(2)    <---------AHL20(2) --------YAB1<---------AHL20(2) <---------AHL20(2)       --------->YAB1--------->AHL20(2) ------->TEIL ----->YAB1  <-----------GT1    --------->AHL20(2)     <---------AHL20(2)   --------->AHL20(2) ---TEIL<---------YAB1  <-----------GT1    <---------------AGL15  --------->AHL20(2)<---------ATHB12 -YAB1--------->YAB1   <-----------GT1  <-----------GT1--------->AHL20(2)   <---------AHL20(2)   catcataataattatttacttttttttaacacatataaatatttactataatgagattaaaataataaatatatttaattttttaaatcatgaaactact  1001500  Previous    Next  AGI:  At5g03780.1    Description:  TRFL10 (TRF-LIKE 10); DNA binding. similar to DNA binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G01150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80644.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23553.1); contains InterPro domain Telomere repeat binding factor (InterPro:IPR013127); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057) Range:  from: 999101    to: 1001028    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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