Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <------NtERF2         <------NtERF2         <---------At4g35610         --------->LBD16         --------->At4g35610         ------>NtERF2        --------->RAP2.3(2)        --------->DEAR3(1)        --------->RRTF1(2)        ----------->RAV1(1)       --------->RRTF1(1)       --------->RAP2.3(1)       --------->ATERF1(1)       --------->RAP2.6(1)       <------NtERF2      --------->At4g35610      ------>NtERF2      <---------ATERF1(1)     --------->RAP2.6(2)     --------->ANAC46     <---------DEAR3(1)     --------->DEAR3(1)     <---------ATERF1(2)    --------->ERF1                                                             <----------DOF2    --------->MYB46(3)              --------->LBD16                          <---------ANAC58    --------->ATERF1(1)        <---------ICU4                             <---------WOX13(1)   <---------At4g35610         --------->YAB1                             <---------GLK1(1)   --------->At4g35610   --------->ANAC58                          <---------ALFIN1    ------->GAMYB  --------->MYB52(2)     ----------->GT1               --------->ANAC46  <---------ANAC58 ---------MYB52(1)       --------->ANAC58 ---------->DOF2 <-----------ARR10  <---------ANAC58 ->ZmHOX2a(2)---------->DOF2  --------->ICU4       ----------->HVH21     <---------ANAC58   tcgttagccgccgcagaaagcgtaggcatgtaataatccccagacaaagagctctcaccgaaactactcccactggattgcctttgcaaccctagagacg  979400                                                                 <---------MYB52(1)                                                         <---------ALFIN1                                                         --------->DEAR3(1)                                                         --------->AtMYB61                                                        --------->MYB46(3)                                                      --------->AtMYB61              --------->LBD16                                                      --------->DEAR3(1)             ------>NtERF2                                                      <---------ALFIN1     --------->WOX13(1)                                                     --------->MYB46(3) ------>ZmHOX2a(2)                      <---------ARR14(2)           <---------ALFIN1    <------ZmHOX2a(2)                      --------->ARR14(2)           --------->AtMYB61  --------->ARR14(2)         <---                  <-----------------AG       --------->YAB1 <---------ALFIN1        --------->ANAC46                 ------>MYB83               <---------ATHB12--------->DEAR3(1)   --------->ARR14(2)                 -------->P <---------MYB52(1)     --------->ANAC46   <---------ARR14(2)         <---                 ------>MYB46(1)            <---------YAB1  --------->AtMYB61    <---------ARR14(2)        <---------AHL20(2) <-------GAMYB --------->TOE2(2) <---------MYB55(2) --------->YAB1   ------        <---------YAB1<---------GLK1(2)  --------->TOE1(2) --------->MYB46(3)<---------ATHB12  ------   <-------TEIL <---------ALFIN1<---------YAB1    --------->MYB46(3) <------ZmHOX2a(1)        -------   aagcatacatattattcccaacccgattcggttgattattcaacctatgatcaccaccaccaccaccgctaggatcccaatcaaatccgcctctctccgc  979500                                                                               <-----------HVH21                                                                              <---------At4g35610                                                                              --------->LBD16                                                                              --------->At4g35610                                                                            <---------LBD16                                                                         <---------At4g35610                                                                         --------->At4g35610                                                                         --------->GLK1(1)                                                                         <---------ZAT2                          <---------MYB46(3)                             --------->ZAT2                         <---------AtMYB61                               <---------GLK1(1)     <-----                         <---------YAB1                                 ----------->ARR10      ------         --------->LBD16 <---------TOE2(3)                             <------ZmHOX2a(1)       ------       <---------LBD16<---------MYB52(1)                             --------->ALFIN1     -----------   <----------DOF2  <----------DOF2                                 --------->ATERF1(1) --------->At4g35610  <---------ANAC58<---------At4g35610                               <------NtERF2       <---------At4g35610  <---------ANAC58--------->LBD16                 --------->ANAC58--------->ALFIN1 <---------ANAC55(2) ------DAG2      --------->ANAC46                 --------->ANAC58<---------ANAC46 <---------ANAC46 -------DOF2    <---------LBD16                <---------REM1(2)  <---------DEAR3(1)  <---------ARR14(2) --->LBD16 --------->ALFIN1        ------>ZmHOX2a(1)    --------->YAB1 ============================== >NtERF2--------->LBD16  <---------TOE1(3)   <---------ETT(2)    <---------LBD16----------->HVH21 -->ANAC46<---------MYB52(1)<--------P       ----------->HVH21  <---------ANAC46----------->TGA1 ----   cttagctttcccggtgttcccgctgttatggttgctcctgttttcgctcgacaaggaatcatagtgaggcggaggagctccggtgacggaaactgacacc  979600                                            --------->LBD16                                   <------ZmHOX2a(2)                                  <---------AGP1                                  --------->ARR11(3)                                  --------->ARR14(2) ------>ZmHOX2a(2)                <---------ARR14(2) ----At4g35610                   <---------CCA1(2)                                                 -- --->ANAC55(2)                  ----------->ARR10                                                 <-- ----->RAV1(2)           ----------->GT1  <---------LBD16  ---------->DOF2                     ------ >HVH21           --------->ANAC58--------->AGP1 --------->GLK1(1)                            <------ =======HOX2a_HOX2a  ---------->DOF2------>ZmHOX2a(2)  --------->AtLEC2       <---------HSFB2a(2) === ------->HVH21    --------->ANAC58<---------ARR11(3) <---------AtLEC2       <------ZmHOX2a(2) -------   tgatcgtcagaaaattgactaagcaaagtgtaattagatcttctaccgggcatttccatggaaaagagagttatcgcgatctagatgagagagtttcccg  979700                                                         --------->ANAC58                                                         --------->ANAC58                         --------->ANAC46             --------->STY1(2)                         ------->GAMYB                <---------ZAT2                         --------->DEAR3(1)           <---------STY1(2)        --------->TOE2(3)--------->RAP2.6(2)          --------->ZAT2 ------->YAB1           --------->DEAR3(2)        <---------STY1(2)                                 < ----ZmHOX2a(2)         --------->MYB46(3)        --------->ZAT2                                    < --->LBD16              <------------AtMYB77      --------->STY1(2)                              ---- ---HSFB2a(2)       <------ZmHOX2a(1)             <---------ZAT2                              ------- ==========================HOX2a_HOX2a         <---------ANAC58                         <---------AHL20(2) -->HSFB2a(2)   --------->TOE1(2)              <---------ANAC58                   <-----------GT1<---   atcatataaacatcaaaccctaggaaaccgccattgttgaagaagtttggcgagctagctagccacttgtttctctctctagtttttcattttttttttg  979800        ---------->DOF2                                                              <------ZmHOX2a(1) ----------DOF2                                                                  --------->TOE1(2) ---------DAG2                                                                  --------->YAB1 ------>ID1                                                               <---------ANAC58 -------->AtSPL8                                   <------------CBF       <---------ANAC58 --------GT1                                    *TSS       <---------AHL20(2)  <---------YAB1      <-   tactttttaaaaaagtctctctctctctctctctctctctctctctctaatggaattggattttttttttgtttttgcgttatcataggaaataaactta  979900           <-------GAMYB                      --------------->AGL15       --------->ARR14(2)                     <---------------AGL15       --------->GLK1(2)                      <----------DOF2       <---------ARR14(2)                    ----------------->AGL3     <----------DOF2                         <-----------------AGL3    <---------ANAC58                         <-----------------AGL2    <---------ANAC58               <----------DOF2  --------->HSFB2a(2) <---------AHL20(2)   <-------TEIL         <---------MYB52(1) ------>ZmHOX2a(1)       <---------AHL20(2)   --------->ABI4(2)  ----------->GT1   ---------->ID1    <----------DOF2 --------DEAR3(1)<---------ICU4  ------>ZmHOX2a(1)  <---------HSFB2a(2)<---------AHL20(2)   ctcggtgcgtttctgttgataatttcgttatattcctcttttgtcctcctttttatggaactttgacattttttttattttttgtcaaaacaattctcca  980000                                                                <---------TOE2(2)               -----                       <---------AHL20(2)             <---------ARR11(3)                   --------->AHL20(2)                      <---------YAB1                  --------->ARR11(3)        <---------AHL20(2)                    --------->YAB1                   --------->GLK1(1)         --------->AHL20(2)                    <--------HAHB4                 --------->YAB1              <---------AHL20(2)                   <---------YAB1                 <---------YAB1<---------TOE1(2)          <---------AHL20(2)   atttagtttgttttttagtgtattattatttgtctaatttttgtattcgactatgatatctattcatatgttttgtgctaatttaatcgctaataaaact  980100                      <---------------AGL15              <------MYB83              <------MYB46(1)             ------->GAMYB                                             <         <---------AHL20(2)             --------->At4g35610                           --------->ANAC58        <---------AHL20(2)             --------->MYB52(1)           --------->YAB1    --------->ANAC46        <---------AHL20(1)          --------->ANAC58       --------->DAG2  ---------->DOF2      -----        --------->AHL20(2)          --------->ANAC58      ---------->DOF2<---------ZAT6  ---------->DOF2 ------>GT1  --------->MYB59        --------->ANAC46 ----------->GT1<---------ANAC46  --------->ANAC58   gtttaaacaattaatttggtatttcatattttggtgataagcaactgaaattggaagataaaaagtagtatcgtagtgaaagtagaaaacgcaaagctaa  980200                                                                                       --------->ANAC55(2)                                                                                       ----------->GT1                                                                                --------->YAB1                                                                              ------>MYB46(1)       -                                                                              ------>MYB83         <-                                                                             --------->WOX13(1)   ---                                                                         --------->ANAC46         <--              <---------ZAT6                                        <----------DOF2    --------->ANAC46        <-------TEIL                                               ------>ZmHOX2a(2)   <---------ANAC55(2)  <------ZmHOX2a(1)                                              --------->ARR11(3) <---------ARR14(2) ---------------AtSPL8              <---------ANAC58             <---------ARR11(3) --------->ARR14(2) ----->DOF2   ----------->GT1       <---------ANAC58     --------->YAB1  <-----------GT1--------->LBD16   aagaggaacatacacagtgtaaaatactaaaccatcttgcctatcaaatccaaatactatcaaatttgatcttttacaccaatctgaatccgtaacattg  980300  Previous    Next  AGI:  At5g03730.1    Description:  CTR1 (CONSTITUTIVE TRIPLE RESPONSE 1); kinase/ protein serine/threonine/tyrosine kinase. Identical to Serine/threonine-protein kinase CTR1 (CTR1) [Arabidopsis Thaliana] (GB:Q05609); similar to serine/threonine protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G24480.1); similar to ethylene control element [Malus x domestica] (GB:ABI58288.1); similar to ethylene control element variant [Malus x domestica] (GB:ABI58289.1); similar to ethylene control element variant [Malus x domestica] (GB:ABI58290.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro Range:  from: 974507    to: 979848    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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