Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      ---------->DOF2 ------>ANAC46 ------>ANAC58          ----------->GT1                                          --------->LBD16 ------>ANAC58       -------->P                                                 --------->ANAC58 -->MYB46(1)       ----------->HVH21                                            --------->ANAC46 -->MYB83        --------------->AGL15                                          <---------ANAC55(2)-- -----ALFIN1<----------DOF2                                                     --------->ANAC58   -- --->MYB46(3)    <---------------AGL15             --------->At5g28300          --------->ANAC55(2)-- ----MYB55(2)   ----------------->AGL1         <---------ALFIN1                <---------LBD16   <--- ----MYB111(1)  ----------------->AGL2      --------->ANAC46             <----------DOF2        ----- --ZAT18 --------->RAP2.6(2)         <----------DOF2                ---------->ID1 ----------->RAV1(1)   accctacaaagccgctttgccctaaccagtaattcccttctttccttcgccactgtaacagcttgttttcgtcttctttgtcccgcaacatttccaacta  721100            --------->LBD16           --------->HSFC1(1)           --------->HSFB2a(2)  --------->AtMYB61                      ----------->GT1 --------->MYB46(3)            --------->ANAC46 ------->ANAC58        --------->YAB1    --------->YAB1 ------->ANAC46       <<<<<<<<<ARR2------>NtERF2                          <-------TEIL ------->ANAC58  --------->YAB1--------->ANAC58  --------->AHL20(2) --------->YAB1 ------ALFIN1 <---------ICU4   --------->ANAC58  <---------AHL20(2) <---------ICU4 ---->ZAT14<---------HSFB2a(2) --------->AtLEC2--------->AHL20(2)  <---------ATHB12          --------   cacaccaccatttccagaattacaatcaaatccatgccaccaattgtaaatttatatggttctgaactaatcaatatacatgaaaaaccaatactaaaag  721200                                           ------>MYB83                                           ------>MYB46(1)                                       -------->P                                    <---------MYB46(2)                                    <---------MYB52(2)                                    <---------MYB111(2)                                    <---------MYB111(1)                                    <---------MYB55(2)                                    --------->MYB46(3)                              <-----------GT1                             <---------ATHB12 <---------ICU4                                <------NtERF2                        --------->TOE2(3)<---------MYB59                                --------->ZAT2                      -------->P --------->MYB46(3)                                <---------ZAT14                      ------>MYB46(1)------->GAMYB      --------->ANAC58       --------->ZAT6                      ------>MYB83 ------>MYB46(1)  --------->HSFB2a(2) <---------ZAT14 <---------At4g35610                     ------>ZmHOX2a(1)--------->MYB52(1)--------->ANAC58--------->ZAT14 <---------ZAT2                    <---------MYB59------>MYB83     <---------HSFB2a(2) <---------ZAT18 --------->At4g35610       --------->At4g35610   --------->MYB46(3)--------->ARR11(3)     --------->ANAC46<-----------RAV1(2) -->DOF2          --------------->AtSPL8 --------->TOE2(3)          --------->ZAT6 --------->ZAT14   gaatgaagcatctaaatttgttcctaccctaatcaccaactaacctaattatctcgagaagcaaacaaaaacactacactaacactactcaggtgccaaa  721300                                                                                      ------>NtERF2                                                                                     --------->ANAC58                                                                                     --------->ANAC46                                                                                     --------->ANAC58                                                                                     --------->RAP2.6(2)                                                                                     ------->GAMYB                                                                                    --------->MYB46(3)                                                                                   --------->At4g35610                                                                                <---------ATHB12                                                                            ------>NtERF2                                                                          --------->ATERF1(1)                                                      <---------ANAC58    <------NtERF2                                                      <---------ANAC58    --------->RAP2.3(1)                                                 --------->ATHB12        <---------ATERF1(1)                   ---------->DOF2    --------->At4g35610                <---------DEAR4(2)                --------->At5g28300   ----------->RAV1(2)               --------->ALFIN1           <-              --------->ZAT6          <---------At4g35610               <---------DEAR3(1)         <-      <---------ANAC46       ----------->GT1   <----------DOF2         <---------LBD16--------->LBD16   atcaagttgagggtttacagtaaaagtcagaaggaaaatcacctgaagactttattgggtcccttcgattagaggcggagccatcatccgccattgaaga  721400                                                                                                    <                                                     --------->LBD16                                <                                                   <---------LBD16                                 --                                          <---------MYB52(1)                                      <--    <---------At4g35610            <---------YAB1<-----------GT1    <---------GLK1(1)            ---- --------ANAC58      --------->HSFB2a(2) ----------->GT1            --------->GLK1(1)            <--- --------ANAC58      <---------HSFB2a(2)--------->MYB59           <------ZmHOX2a(1)   ----------->GT1   agcttgagcacagcaagtttcttcgagagtagggtttttgattcggtaatttcaccggagtaagaataggatttcgccgaaaacgaattggttaatttgg  721500              --------->ANAC58              --------->ANAC58             --------->MYB46(3)             --------->DEAR3(1)             --------->ATERF1(1)            --------->ATERF1(1)            <------NtERF2            <---------ATERF1(1)           --------->PCF2           <---------ATERF1(1)           ------>NtERF2  <---------MYB52(1) ---------ANAC58           ---------->DOF2                       <---------AHL20(2) ---------ANAC58   --------->ANAC58 --------->ANAC58    <---------ARR14(2) ---->ZmHOX2a(2)   --------->ANAC58 --------->ANAC46    <---------ICU4 ----ZmHOX2a(2)    ----------->RAV1(1)*TSS              --------->ARR14(2) ----->ARR14(2)<------NtERF2        --------->ANAC58 --------->YAB1 ------ARR14(2)------>NtERF2    --------->CCA1(2)------>NtERF2   --------->AHL20(2)                --   atccgttccctcgcgcccgcccagcaaaaaaaagaaacacgaaaattttgccgactcatatttgcatataatttcatattagtccctagtatttccaagt  721600                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                    <---------DAG2              ------->GAMYB                                      --    <---------AHL20(2)     ------------>CBF    --------->MYB46(3)                                  <-   --------->AHL20(2)    <-----------GT1    <---------WRKY12                                      ---   ----------->TBP  <----------DOF2        <------ZmHOX2a(2)        <----------DOF2             ----- ---------->CBF  <-----------GT1  ----------------->AG       --------->ANAC46      <-----------RAV1(1)   atacaataaatagcccatttaactttattaccaatttccgaatggatcaacgatcgtggtttcacgaagtctttgacattcgcctatgttgcaaactaaa  721700                                                                                               ------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                         ----------->HVH21                                                                                        <-----------HVH21                                                                                      ------->MYC4                                                                                      ------->MYC3                                                                                      -------->ABF1                                      --------->At5g28300                             <-------MYC3                                  <---------ALFIN1                                    <-------MYC4                              --------->ANAC55(2)                <-----------GT1      <-------MYC2                              <---------ANAC55(2)          ----------->GT1            ------->MYC2                     <---------MYB46(3)<---------MYB52(1)<-------MYC2                --------->TGA1a                 --------->ATHB12<-------TEIL            ------->MYC2                --------->O2                 <---------ICU4  --------->SPL7          ------->MYC3                <---------TGA1a          ------>NtERF2       <---------ANAC58           <-------MYC3                --------->ANAC46    <---------bZIP60(2)   <----------DOF2              ------->TEIL                  <---------O2 ------->YAB1   --------->ICU4<---------ANAC58      --------->ANAC58                 --------->ANAC55(2) --------ICU4   <---------YAB1<---------ANAC46      --------->ANAC58                 <---------ANAC55(2) ------>ICU4  --------->YAB1 --------------->AtSPL3 <---------ANAC46          <---------YAB1--------- ---->YAB1<XXXXXXXXXXXXXXXXXXXXMIR169D-G         ----------->HVH21          --------->YAB1  <--------   ataatgacatggcgactcatcattggttctttacgtacaccgtaatctaatgtgacgcatgtggtaataactcttgtgtcataatacacgtgtcacgcat  721800                                           <---------DAG2                                           <----------DOF2                                          <---------ANAC58        *TSS                                          <---------ANAC58      <---------MYB52(1)                                     --------->ZAT2            <-----------TGA1      ------>ZmHOX2a(2)              --------->At4g35610       <-----------HVH21    --------->ARR14(2)               <---------ZAT2           --------->ANAC55(2)    <---------ARR11(3)               ----------->RAV1(2)      --------->ANAC46    --------->ARR11(3)           --------->MYB52(1)      <---------DAG2 ->TEIL                         <---------ALFIN1         <----------DOF2 >ANAC46                     --------->ZAT14           ------>MYB46(1)                              < >ANAC55(2)                  <---------ZAT14           ------>MYB83                    <---------HSFB2a(2) >ANAC58                     <---------ZAT18          <---------ALFIN1                 --------->HSFB2a(2) >ANAC55(1)          --------->ICU4--------->DEAR3(1)--------->MYB46(3)      <-------TEIL      ------ >ANAC58------>ZmHOX2a(1)    --------->ZAT18        --------->ANAC58<----------DOF2  <---------HSFB2a(2) -ANAC55(2)    --------->LBD16  --------->ANAC46    --------->ANAC58<---------DAG2   --------->HSFB2a(2)   ccacatgatcctcttccctgaacatgatgagttcacaccggctggctttttctcacccacttttccgtcactttctcggttcattttctcgagaaaataa  721900                                                                                           --------->ZAT2                                                                                           --------->At4g35610                                                                                        <---------ZAT2                               <---------GLK1(2)                                        --------->At4g35610                               --------->ARR14(2)                              ------>MYB83<---------At4g35610                       ---------->DOF2                               <<<<<<<<<WRKY18    <---------At4g35610                      --------->AtMYB61                              <---------WRKY12 ---------->CDC5               --------->TOE2(3)                                   --------->TOE2(3)  <-----------RAV1(2)         --------->ANAC58      <---------ARR14(2)                 --------->YAB1      ===============         --------->ANAC46--------->ANAC58                   <---------AGP1   <---------MYB59        -         --------->ANAC58--------->ANAC58              <----------DOF2     ------->TEIL --------->ZAT2 ----------ID1 --------->TOE1(3)                       --------------------->WRI1   --------->TOE2(3) ---->DOF2    ----------->RAV1(2)          --------->MYB52(1) ------>ZmHOX2a(2)------>MYB46(1)      -   agaagacgaagacgaaacctgaaaccaaagccaaattctctcgattaacagaaattcctttggatctatcgtcaatggacctaatacctcagcagctcaa  722000  Previous    Next  AGI:  At5g03070.1    Description:  binding. similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO18121.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61727.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 718203    to: 721538    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g03080.1    Description:  phosphatidic acid phosphatase-related / PAP2-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO18122.1); contains InterPro domain Phosphatidic acid phosphatase type 2/haloperoxidase; (InterPro:IPR000326) Range:  from: 721866    to: 723399    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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