AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                           <---------ICU4
                                          --------->AHL20(2)
                                          --------->AHL20(1)
                                  --------->YAB1
                                 <---------YAB1                                      <---------ANAC46
                                 ----------->GT1         ------->TEIL            <-------MYC2
                               --------->YAB1        ------->TEIL                <-------MYC3
                            <---------AtLEC2    <---------ANAC55(2)              ------->MYC3
   <---------ARR11(3)      <-------TEIL   <---------AHL20(2)       <-----------GT1 --------->ZAT18
   --------->ARR11(3)   --------->CCA1(2)--------->AHL20(2)--------->ZAT6        ------->MYC2   ----
 
tttgaacatcttgagtatgttttcaagagatgcatgatgataaaaaaaattacatgaatgtaactctaaattactaaataagcatgtggcctaagaacat  699800
                                        --------->ANAC55(2)
                                        <---------ANAC55(2)
                                        <------MYB83
                                        <------MYB46(1)
                                       --------->MYB46(2)
                                       --------->MYB59
           <---------ALFIN1            --------->MYB111(1)
          --------->MYB46(3)          <---------MYB55(1)
         ------>MYB83                <<<<<<<<<MYB98                                            -----
         ------>MYB46(1)             <---------MYB52(1)                                <---------ARR11(3)
        --------->ANAC46           <------MYB83                              <---------HSFB2a(2)
        <---------ALFIN1           <------MYB46(1)                       --------->ZAT14       -----
       <---------MYB55(2)       <---------MYB52(1)                       <---------ZAT18  <---------
       --------->MYB46(3)      <-------GAMYB <---------------AtSPL8     <---------ZAT6 --------->ARR11(3)
--------->RVE1(1)             <---------MYB46(3)        <---------ARR11(3)   --------->HSFB2a(2)
----->AHL20(2)   ----------->HVH21<---------MYB46(3)    --------->ARR11(3)   --------->HSFC1(1)-----
 
aaaatatcgacccaccacttgtgaaaggttttgtcgttgggttaggtaatggtacttgaaatcttgtttgaaatagtgttctcgaatttagacctttcac  699900
          --------->ATHB51
         <---------YAB1
       <---------AHL20(2)                        --------->CCA1(2)
      --------->AHL20(2)                        --------->ARR14(2)                                <-
----------->GT1                                 <---------ARR11(3)                                <-
---->ANAC46         <---------TOE1(2)     --------->ANAC58         <----------DOF2        <---------YAB1
---->ANAC58 <---------YAB1                --------->ANAC58       ---------->ID1      <---------AHL20(2)
-DOF2 <---------AHL20(2) ------------>CBF --------->ANAC46      <-----------GT1     --------->AHL20(2)
---->ANAC58<------------CBF        <----------DOF2       <---------YAB1     <---------REM1(2)     --
 
gatatgttatttattattgttccttcgtttcaattcttctttctcacacaagatttgactacgattttttctttttgtatacacagatttattttgatca  700000
                                                                           <------MYB46(1)
                                                                          <---------TOE2(3)
                                                                          --------->MYB59
                                                                      <---------ICU4              --
             --------->WRKY18(1)                                     --------->ICU4               <-
           ----------->GT1                                           <---------YAB1               --
    <---------ANAC58        --------->AHL20(2)                      <---------TOE2(3)            <--
    <---------ANAC58        <---------AHL20(2)                   <---------WOX13(1)              <--
--------AHL20(2)       <-------TEIL           --------->ARR11(3)<------------CBF                 ---
--------YAB1<-----------HVH21            <-----------HVH21------>ZmHOX2a(1)<------MYB83    ---------
------->AHL20(2) ---------->DOF2  ---------->DOF2    <---------GLK1(1)--------->ATHB12    ----------
 
tataattccttggccggtcaaaaaggctcatttaaataaaagcccatcagaccttgaattcctctctaattgatgattaggtttttttttgggtaaagta  700100
                                                                                    --------->YAB1
                                                                                    <---------ICU4
                                                                                   <---------YAB1
                                                                                 --------->YAB1
                                                                                 <---------ICU4
       ----------->GT1                                                        <---------ICU4
 <---------ICU4                                                              --------->ICU4
 --------->ATHB12                                                            <---------ATHB12
--------->ICU4                                                           --------->LBD16
<---------YAB1                                                          --------->ANAC46
------->YAB1                                                            --------->LBD16
--------ICU4                                                           --------->LBD16
------>HAHB4                                                           <---------HSFB2a(2)
-------ATHB12                                                     <---------At4g35610 <---------YAB1
-------YAB1                                                  --------->CCA1(2)--------->YAB1
------>ICU4 ---------->DOF2     --------->AHL20(2)  ------>NtERF2 --------->ZAT2<---------YAB1
>DAG2 <---------TOE2(3)   ----------->GT1          --------->DEAR3(1)  --------->HSFB2a(2)     -----
>DOF2 <---------TOE1(3)<---------ATHB12       --------->MYB52(1)  --------->At4g35610 --------->At4g35610
 
atgatgattagggtttaaagactcaaatgaagaaaaaaaatcgaaacacaaacgacgacggaagagatgagctccccgaaatcatcatcatcagagtcct  700200
        <---------bZIP60(1)
        --------->O2
        --------->bZIP60(1)         ------->TEIL
        <---------TGA1a      --------->SPL7
        <---------O2        <---------MYB52(1)
        --------->TGA1a    <---------SPL7
      ------>NtERF2     <---------At5g28300
     ----------->HVH21  <---------DOF5.7(2)   --------->ATHB12     --------->GLK1(2)
     --------->DEAR3(1)<-----------GT1<---------AGP1               <---------ARR14(2)
   ------>ZmHOX2a(1)  --------->DOF5.7(2)     <-----------RAV1(1)  --------->ARR14(2)
->ZmHOX2a(1)       ---------->ID1--------->ANAC46              --------->HSFB2a(2)     --------->TOE2(3)
 
cgtctcctccgacgtcgttttcgtcgttaccgttcgacgtagctctgaattgttgggctcgtgtctcgagaatccattatccaactctattcttagtctc  700300
                                          --------->ANAC58
                                          --------->ANAC58
                                          --------->ANAC46                          --------->TOE2(3)
                                        <---------ALFIN1                     <---------ANAC46
                        ==========================RAV                        <---------ANAC58
          ------>ZmHOX2a(2)           ----------->RAV1(1)                <---------MYB52(1)
         <---------GLK1(1)          ------>NtERF2                      <---------ANAC46
         <------ZmHOX2a(2)         --------->ANAC46                    <---------ANAC58
         --------->GLK1(1)   <---------ZAT2                            <---------ANAC58
        --------->ARR11(3)   --------->ZAT2                --------->MYB52(1)<---------ANAC58      -
        <---------ARR11(3)   --------->At4g35610 --------->LBD16   <---------ARR11(3)              -
        <---------AGP1  ----------->RAV1(2)    <---------LBD16     --------->ARR11(3)     --------->YAB1
 
caagaatttaagatctctcatcgcttcgcctgagctcgaggccacacgactccgcattggaataacagaagatttcgtttgcttagacctcaataagaaa  700400
               <-------TEIL
         <---------STY1(2)
         --------->STY1(2)
         <---------ZAT2
         --------->ZAT2                               --------->MYB46(3)             --------->ARR14(2)
     --------->TOE1(3)                 ----------->RAV1(1)                --------->YAB1
    --------->ZAT6                     --------->MYB52(1)             ------>ZmHOX2a(1)
-------->TOE2(3)          ------>ZmHOX2a(1)     <-----------GT1      --------->TOE2(3)             <
-------->TOE1(3)         --------->TOE2(3)------->GAMYB      <---------MYB52(1)      <---------ARR14(2)
 
aaccctaaccctagctggttcatactttcctcaactccaaaacaacagaagttactacccatcccttcgtttccttatcaacatcccaaatactcgacca  700500
                   <-----------GT1
                 <---------WOX13(1)
             <---------WOX13(1)     <---------ANAC46
           --------->ATHB12         ----------->GT1                   --------->ANAC58
          <-------TEIL             <------NtERF2                      --------->ANAC58
----------DOF2 --------->ATHB12 <------NtERF2  ---------->DOF2--------->ALFIN1
 
ttcttttagtcgattcattgatttacattatcggaggcatcgtgaatagacaaaggagcaatagagtgttgatactcaattctctatctcaccaatggag  700600
                                                                    <---------WOX13(1)
                                                               <---------ANAC58
                  -------->P                                   <---------ANAC55(2)
                  ------>MYB83                                 --------->ANAC55(2)
                  ------>MYB46(1)                              <---------ANAC58                   <-
                 <---------ALFIN1    <---------At4g35610      ------->TEIL                        --
                <---------MYB46(2)   --------->At4g35610  <---------------AtSPL8               -----
                --------->DEAR3(1)  --------->DEAR3(1)    <---------------AtSPL3              <-----
              ------>NtERF2        --------->MYB46(3)     --------------->AtSPL8             <------
             <---------ANAC46     <---------At4g35610   --------->MYB52(2)                 ---------
        <---------ICU4            <---------ZAT2      <--------P  --------->ATHB12        --------->RVE1(1)
       <---------ATHB12      <-----------GT1         --------->At5g28300   <-----------ARR10 <------
 
tagtctcccaaacattgcgcctacctcgagtttctccagccgctgatgtaatcgacggtaagttgtacgtgattggaggctcttcgtccaaaaatatcgg  700700
<- Previous    Next ->

AGI:  At5g02990.1   
Description:  kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At5g02990 [Arabidopsis Thaliana] (GB:Q9LYY6); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G46050.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043)
Range:  from: 700167    to: 702628    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version