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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ICU4
--------->
AHL20(2)
--------->
AHL20(1)
--------->
YAB1
<---------
YAB1
<---------
ANAC46
----------->
GT1
------->
TEIL
<-------
MYC2
--------->
YAB1
------->
TEIL
<-------
MYC3
<---------
AtLEC2
<---------
ANAC55(2)
------->
MYC3
<---------
ARR11(3)
<-------
TEIL
<---------
AHL20(2)
<-----------
GT1
--------->
ZAT18
--------->
ARR11(3)
--------->
CCA1(2)
--------->
AHL20(2)
--------->
ZAT6
------->
MYC2
----
tttgaacatcttgagtatgttttcaagagatgcatgatgataaaaaaaattacatgaatgtaactctaaattactaaataagcatgtggcctaagaacat
699800
--------->
ANAC55(2)
<---------
ANAC55(2)
<------
MYB83
<------
MYB46(1)
--------->
MYB46(2)
--------->
MYB59
<---------
ALFIN1
--------->
MYB111(1)
--------->
MYB46(3)
<---------
MYB55(1)
------>
MYB83
<<<<<<<<<
MYB98
-----
------>
MYB46(1)
<---------
MYB52(1)
<---------
ARR11(3)
--------->
ANAC46
<------
MYB83
<---------
HSFB2a(2)
<---------
ALFIN1
<------
MYB46(1)
--------->
ZAT14
-----
<---------
MYB55(2)
<---------
MYB52(1)
<---------
ZAT18
<---------
--------->
MYB46(3)
<-------
GAMYB
<---------------
AtSPL8
<---------
ZAT6
--------->
ARR11(3)
--------->
RVE1(1)
<---------
MYB46(3)
<---------
ARR11(3)
--------->
HSFB2a(2)
----->
AHL20(2)
----------->
HVH21
<---------
MYB46(3)
--------->
ARR11(3)
--------->
HSFC1(1)
-----
aaaatatcgacccaccacttgtgaaaggttttgtcgttgggttaggtaatggtacttgaaatcttgtttgaaatagtgttctcgaatttagacctttcac
699900
--------->
ATHB51
<---------
YAB1
<---------
AHL20(2)
--------->
CCA1(2)
--------->
AHL20(2)
--------->
ARR14(2)
<-
----------->
GT1
<---------
ARR11(3)
<-
---->
ANAC46
<---------
TOE1(2)
--------->
ANAC58
<----------
DOF2
<---------
YAB1
---->
ANAC58
<---------
YAB1
--------->
ANAC58
---------->
ID1
<---------
AHL20(2)
-
DOF2
<---------
AHL20(2)
------------>
CBF
--------->
ANAC46
<-----------
GT1
--------->
AHL20(2)
---->
ANAC58
<------------
CBF
<----------
DOF2
<---------
YAB1
<---------
REM1(2)
--
gatatgttatttattattgttccttcgtttcaattcttctttctcacacaagatttgactacgattttttctttttgtatacacagatttattttgatca
700000
<------
MYB46(1)
<---------
TOE2(3)
--------->
MYB59
<---------
ICU4
--
--------->
WRKY18(1)
--------->
ICU4
<-
----------->
GT1
<---------
YAB1
--
<---------
ANAC58
--------->
AHL20(2)
<---------
TOE2(3)
<--
<---------
ANAC58
<---------
AHL20(2)
<---------
WOX13(1)
<--
--------
AHL20(2)
<-------
TEIL
--------->
ARR11(3)
<------------
CBF
---
--------
YAB1
<-----------
HVH21
<-----------
HVH21
------>
ZmHOX2a(1)
<------
MYB83
---------
------->
AHL20(2)
---------->
DOF2
---------->
DOF2
<---------
GLK1(1)
--------->
ATHB12
----------
tataattccttggccggtcaaaaaggctcatttaaataaaagcccatcagaccttgaattcctctctaattgatgattaggtttttttttgggtaaagta
700100
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
YAB1
<---------
ICU4
----------->
GT1
<---------
ICU4
<---------
ICU4
--------->
ICU4
--------->
ATHB12
<---------
ATHB12
--------->
ICU4
--------->
LBD16
<---------
YAB1
--------->
ANAC46
------->
YAB1
--------->
LBD16
--------
ICU4
--------->
LBD16
------>
HAHB4
<---------
HSFB2a(2)
-------
ATHB12
<---------
At4g35610
<---------
YAB1
-------
YAB1
--------->
CCA1(2)
--------->
YAB1
------>
ICU4
---------->
DOF2
--------->
AHL20(2)
------>
NtERF2
--------->
ZAT2
<---------
YAB1
>
DAG2
<---------
TOE2(3)
----------->
GT1
--------->
DEAR3(1)
--------->
HSFB2a(2)
-----
>
DOF2
<---------
TOE1(3)
<---------
ATHB12
--------->
MYB52(1)
--------->
At4g35610
--------->
At4g35610
atgatgattagggtttaaagactcaaatgaagaaaaaaaatcgaaacacaaacgacgacggaagag
atgagctccccgaaatcatcatcatcagagtcct
700200
<---------
bZIP60(1)
--------->
O2
--------->
bZIP60(1)
------->
TEIL
<---------
TGA1a
--------->
SPL7
<---------
O2
<---------
MYB52(1)
--------->
TGA1a
<---------
SPL7
------>
NtERF2
<---------
At5g28300
----------->
HVH21
<---------
DOF5.7(2)
--------->
ATHB12
--------->
GLK1(2)
--------->
DEAR3(1)
<-----------
GT1
<---------
AGP1
<---------
ARR14(2)
------>
ZmHOX2a(1)
--------->
DOF5.7(2)
<-----------
RAV1(1)
--------->
ARR14(2)
->
ZmHOX2a(1)
---------->
ID1
--------->
ANAC46
--------->
HSFB2a(2)
--------->
TOE2(3)
cgtctcctccgacgtcgttttcgtcgttaccgttcgacgtagctctgaattgttgggctcgtgtctcgagaatccattatccaactctattcttagtctc
700300
--------->
ANAC58
--------->
ANAC58
--------->
ANAC46
--------->
TOE2(3)
<---------
ALFIN1
<---------
ANAC46
==========================
RAV
<---------
ANAC58
------>
ZmHOX2a(2)
----------->
RAV1(1)
<---------
MYB52(1)
<---------
GLK1(1)
------>
NtERF2
<---------
ANAC46
<------
ZmHOX2a(2)
--------->
ANAC46
<---------
ANAC58
--------->
GLK1(1)
<---------
ZAT2
<---------
ANAC58
--------->
ARR11(3)
--------->
ZAT2
--------->
MYB52(1)
<---------
ANAC58
-
<---------
ARR11(3)
--------->
At4g35610
--------->
LBD16
<---------
ARR11(3)
-
<---------
AGP1
----------->
RAV1(2)
<---------
LBD16
--------->
ARR11(3)
--------->
YAB1
caagaatttaagatctctcatcgcttcgcctgagctcgaggccacacgactccgcattggaataacagaagatttcgtttgcttagacctcaataagaaa
700400
<-------
TEIL
<---------
STY1(2)
--------->
STY1(2)
<---------
ZAT2
--------->
ZAT2
--------->
MYB46(3)
--------->
ARR14(2)
--------->
TOE1(3)
----------->
RAV1(1)
--------->
YAB1
--------->
ZAT6
--------->
MYB52(1)
------>
ZmHOX2a(1)
-------->
TOE2(3)
------>
ZmHOX2a(1)
<-----------
GT1
--------->
TOE2(3)
<
-------->
TOE1(3)
--------->
TOE2(3)
------->
GAMYB
<---------
MYB52(1)
<---------
ARR14(2)
aaccctaaccctagctggttcatactttcctcaactccaaaacaacagaagttactacccatcccttcgtttccttatcaacatcccaaatactcgacca
700500
<-----------
GT1
<---------
WOX13(1)
<---------
WOX13(1)
<---------
ANAC46
--------->
ATHB12
----------->
GT1
--------->
ANAC58
<-------
TEIL
<------
NtERF2
--------->
ANAC58
----------
DOF2
--------->
ATHB12
<------
NtERF2
---------->
DOF2
--------->
ALFIN1
ttcttttagtcgattcattgatttacattatcggaggcatcgtgaatagacaaaggagcaatagagtgttgatactcaattctctatctcaccaatgga
g
700600
<---------
WOX13(1)
<---------
ANAC58
-------->
P
<---------
ANAC55(2)
------>
MYB83
--------->
ANAC55(2)
------>
MYB46(1)
<---------
ANAC58
<-
<---------
ALFIN1
<---------
At4g35610
------->
TEIL
--
<---------
MYB46(2)
--------->
At4g35610
<---------------
AtSPL8
-----
--------->
DEAR3(1)
--------->
DEAR3(1)
<---------------
AtSPL3
<-----
------>
NtERF2
--------->
MYB46(3)
--------------->
AtSPL8
<------
<---------
ANAC46
<---------
At4g35610
--------->
MYB52(2)
---------
<---------
ICU4
<---------
ZAT2
<--------
P
--------->
ATHB12
--------->
RVE1(1)
<---------
ATHB12
<-----------
GT1
--------->
At5g28300
<-----------
ARR10
<------
tagtctcccaaacattgcgcctacctcgagtttctccagccgctgatgtaatcgacggtaagttgtacgtgattggag
gctcttcgtccaaaaatatcgg
700700
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AGI:
At5g02990.1
Description:
kelch repeat-containing F-box family protein. Identical to Putative F-box/Kelch-repeat protein At5g02990 [Arabidopsis Thaliana] (GB:Q9LYY6); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G46050.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043)
Range:
from: 700167
to: 702628
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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