Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                           --------->TOE1(3)                                              --------->ANAC58                             --------->TOE2(3)                       ----------->GT1        --------->ANAC58                   --------->TOE1(3)                    <----------DOF2        --------->WRKY18(1)                   --------->TOE2(3)  -               <---------ANAC58           <-----------HVH21             <----------DOF2   --------->ZAT6 --->ZmHOX2a(1)<---------ANAC58 <----------DOF2                  <------ZmHOX2a(2)      <-----------GT1   ctgctaagtatgtcttctcgtgctttggttatttcttttgatgaggtcaagcctcatttttcagtcgatcactcctttagaaaccctaattaaccctaaa  682200                              <---------ATHB51                              --------->ICU4                           --------->AHL20(2)   --------->AHL20(2)                           <---------AHL20(2)   --------->ATHB12                          <---------AHL20(1)    --------->ATHB51               --------->AHL20(2)      --------->TOE1(3)        --------->ARR14(2)--------->AHL20(2)    <---------AHL20(2)                      ------>ZmHOX2a(1)        <---------ARR14(2)--------->YAB1       <---------AHL20(2)                      --------->TOE1(3) ---->DOF2     <---------AHL20(2)      --------->TOE2(3)               --------->MYB59 --------->TOE2(3) -------->ARR14(2)        <---------AHL20(2) <---------ICU4 ----------->GT1    <---------YAB1   agaatactcgtatttgataaattttcaataaaattatggaaccctaaaaattatttgataacttgaaaatagttagctattttgattttccttaaaaata  682300                                            --------->ATHB51                                         --------->YAB1                                         -------->HAHB4                                         -------->ATHB1                                         <--------HAHB4                                         <---------AHL20(2)                                         <---------ICU4                                     <---------AHL20(2)                                     --------->AHL20(1)                                     --------->AHL20(2)                                     <---------AHL20(1)                                  <---------ICU4                                  <--------ATHB1                                  --------->YAB1                                  --------->ATHB51                                  <--------HAHB4                                  -------->HAHB4                                                   <-                                 <---------ATHB51                                                 <--                                 <---------YAB1                                                  <---                                 --------->ICU4   <---------WOX13(1)                          <------                               --------->YAB1<------------CBF                                 -------                              <---------AHL20(2) <------------CBF                             <------                             --------->ICU4 --------->ATHB12                                  <------                           <---------ICU4--------->ATHB51                                     -------                          <---------YAB1<---------ATHB51                                     <-------               <---------ICU4<---------YAB1<---------YAB1                                <---------ATHB12              <---------ATHB51--------->AHL20(2)--------->ATHB12                         ------------              <---------AHL20(2) --------->AHL20(2)                                <---------HSFB2a(2)        ----------->GT1   --------->ICU4<---------YAB1         <<<<<<<<<TBF1       --------->HSFB2a(2) <-----------GT1        --------->YAB1  --------->ICU4     <-----------GT1   ---------->ID1  <-------   gtttttcttcttgtaaattattccactgataattaataattaattattattgattgatttttttcttcttctaatttttgttcttctacaaatcaataat  682400   <---------ALFIN1 ----------GT1 ---------GT1 ------AHL20(2) ---AHL20(2) -->ATHB51                                                                         <<<<<<<<<TBF1 --ATHB1                                                                 <---------ETT(2) ---ICU4                                                                 --------->ETT(2) -->AHL20(2)      <-----------GT1                --------->ANAC46      --------->REM1(2) --ATHB12   <---------ATHB12                     --------->ANAC58     --------->ALFIN1 >CBF      --------->ANAC58      <----------DOF2 --------->ANAC58   <---------ANAC58 --ATHB51  --------->ANAC58 <<<<<<<<<TBF1    ---------->DOF2        <---------ANAC58       ------>ZmHOX2a(1)   ttatcccactgccaagcattttgccccttcttcttctttgcacacataaaaacgcgacaacttctcttgagcgtgtcgactcttcttcttctccttcttc  682500                                                                                                    <                                                                                                   --           <---------DAG2                                                                          <-         ------->TEIL                                                                              <-        <---------ALFIN1                          <----------DOF2                             <------NtERF2       <---------ZAT14                    <---------ANAC58                                   <-------       <---------At4g35610                <---------ANAC58                               ------>MYB46(1)    ----------->RAV1(2)       <<<<<<<<<TBF1   <---------GLK1(2)                          ------>MYB83  <---------ANAC58       <----------DOF2<---------YAB1             ---------->DOF2 --------->MYB46(3)  <---------ANAC46    <-----------GT1  ------->MYC3            --------->WOX13(1)--------->ANAC46  --  <---------ANAC58<----------DOF2      <-------MYC3        ----------->GT1    <-------TEIL  ---------   gatttcgtctgcaccttctcctttttactttcttcttcccatatgcttgattctttgtgaagggttaatcaaagatgagattcaaacaacctagccgtcg  682600           <---------YAB1           ----------->GT1        <---------MYB52(1)       <-----------HVH21       <---------RAP2.6(3)       <-----------TGA1      --------->bZIP60(2)      <---------ANAC55(2)      --------->ANAC55(2)                                               ----------->HVH21           =  <---------SPL7                                                       <---------MYB55(2)           - ------>ZmHOX2a(2)                                       --------->WOX13(1)                <---------ARR11(3) ------ZmHOX2a(2)                               <---------ANAC46       --------->MYB46(3)  --------->ARR14(2) ------->ARR14(2)                               <---------REM1(1)     --------->ANAC46     <---------ARR14(2) --------ARR11(3)                             <------MYB46(1)        -------->P            --------->ARR11(3) --------ARR14(2)                             <------MYB83 <---------ATHB12                <--------- --RAP2.6(3)                                 <---------AtMYB61    <------ZmHOX2a(2)        <---------ARR11(1) ------->ARR11(3)     <------ZmHOX2a(2)     <XXXXXXXXXXXXXXXXXXXXMIR171A--------->ANAC46  <---------CCA1(2) >DEAR3(1) --------->ICU4                 <-----------RAV1(1) --------->At4g35610     ----------->RAV1(1)   agatcgtcccgtcatgtttaaacgatcaaaaaatgtttcagtcgatgttggtgtagactcaatcagcgatctacccgacgctgttctccaacatatcttc  682700                          <---------ARR14(2)                          --------->ARR14(2)                          <---------GLK1(2)                      <------ZmHOX2a(2)                                             <----------DOF2                <---------DEAR3(1)                                           <---------CCA1(2)       <---------ETT(1)--------->YAB1                                   --------->ANAC58 ============================HOX2a_HOX2a                                --------->ANAC58 ----->ZmHOX2a(1) <------NtERF2    <---------ANAC58                     --------->bZIP60(2)         < --ARR10----------->RAV1(1)        <---------ANAC58                   <---------ALFIN1  <---------AtLEC2   tcctatattccgacagagttggcgatcagaacctctgtcttgtccaaacgatggagacatgtatggtccgagacacctcatctctcctttgaatggctca  682800                                       --------->ANAC46                                       --------->ANAC58                                       --------->ANAC58                                     <---------ALFIN1                                    <---------REM1(2)                            --------->At4g35610                                 <---------ZAT2                                  <---------At4g35610                                 --------->ZAT2                             ----------->HVH21                                 --------->At4g35610                        <---------MYB52(1)                                 <---------At4g35610                       <-----------HVH21                                --------->ANAC58                   --------------->AtSPL8       -----            ----------->GT1     --------->ANAC58   <------ZmHOX2a(2)      --------->ANAC46      -----     <---------------AGL15   <---------STY1(2)    <---------ARR11(3)   ------->TEIL          -------- ---------GLK1(1)            --------->STY1(2)    --------->ARR11(3) --------->ZAT14         <-------   aggtttcccctaaattgataaacaaaaccctagccagctacacggcttccaagatcaagagttttcatctctgtacccgttacagctacgaggcagacac  682900                                                                <---------ANAC58                                                                <---------ANAC58                   <-                                                                <---------ANAC46                   <-                                                  <----------DOF2                               <----                                                 ------>ZmHOX2a(2)   --------->ARR11(3)       <------                                               <---------ARR11(3)    <---------ARR11(3)      --------                                               --------->ARR11(3)--------->LBD16             <------- ---->ANAC58                             --------->ALFIN1       <---------ANAC55(2)     --------->YAB1 ---->ANAC58                            ------->MYC3        <---------SPL7<-----------GT1 <---------YAB1 ->ARR14(2)--------->At4g35610          <-------MYC3       <---------ANAC58       <-----------GT1  <- --ARR14(2)--------->ZAT2              <---------ANAC46    <---------ANAC58<---------At5g28300-------   tcaccatgttaacagctcgatcgagtttgcaatgtctcacaacgtggatgatctttctctggcgttccgtagatgttcaccgttttacaattttgatgat  683000           <---------ALFIN1          ------>MYB83                                                <---------ANAC46     --------->ANAC46                                                 <---------ANAC58     --------->REM1(1)                                                <---------ANAC58           ---- --------ANAC58                                               <---------AtLEC2                   ---- --------ANAC58                                            ------->PIF5                          ---- -----WOX13(1)                                             <-------PIF5                          ---- ---ICU4  -------->P---------->DOF2          --------->ATHB12<-------TEIL                      <----- ->ICU4 --------->AtMYB61              --------->CCA1(2)  --------->ZAT2                ------->TEIL- --YAB1 --------->MYB46(3)            <---------ARR11(3)  <---------ZAT2                --------->GLK1(2) --------ANAC46------>ZmHOX2a(1)      --------->ARR11(3)  --------->At4g35610          --------->ARR11(3) -->ATHB12------>MYB46(1)           ----------->ARR10   <-----------RAV1(2)        ---------->DOF2<--   tgcttctacaccaactcctctctaaagcgagtcgagttgagatatgttgatttgatgcccaggtgcatggtgtcttggacatcactaaagaacctgtctt  683100  Previous    Next  AGI:  At5g02930.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At5g02930 [Arabidopsis Thaliana] (GB:Q9LYZ2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G02910.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83117.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 682575    to: 684478    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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