Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ICU4                     --------->ARR11(3)                           --------->ATHB12           ----------->GT1                          <---------ATHB51           --------------->AtSPL3                          <---------YAB1             <---------------AtSPL8                         <                       <---------YAB1                --------------->AtSPL8                         <               --------->TOE1(3)                   <---------GLK1(2)    --------->MYB52(1)    <------               --------->TOE2(3)            <------ZmHOX2a(1) <---------ARR11(3)---------->DOF2     -   caaaacacagccataaaccctaatttcgattattgcaatagctagaggagttagaatcgtacaatatctcagattaacagaaaaaagagttgaagaacga  641600                             <---------------AGL15                             --------------->AGL15                             <---------DAG2                          <-----------GT1                       --------->ANAC58                       <---------ANAC55(2)                                                --------->AtLEC2                       --------->ANAC55(2)             ------->TEIL   --------->TOE2(3)<---------ATHB12                <---------MYB52(2)                     --------->GLK1(2)               --------->MYB46(3)               ------>MYB83  <----------DOF2           <---------ARR11(1)             ------>MYB83  - ---------GLK1(2)      --------->ANAC58                <---------ARR14(2)             -------->P----- ---------ARR14(2)     ----------->GT1                 <-----------ARR10              ------>MYB46(1) ----ID1       ------>MYB46(1)                        <---------ARR14(1)     --------->YAB1     ----- -------->ARR14(2)  <---------ATHB12     --------->YAB1--------->ARR14(2)   --------->AHL20(2)-------   cgaattctcaaaaaaccaactaatcaagtaactttttgaagaatcatcaaaaaatcgaatctagacaaattacatcaaataaaaatccaaccatacaaaa  641700                                   --------->AHL20(2)                             --------->YAB1                    --------->LBD16                        ------>ZmHOX2a(2)                     --------->HSFB2a(2)           ---------                      --------->ARR11(3)                  --------->ZAT2                    ---------                <---------ZAT14 --------->YAB1            <---------At4g35610 --------->YAB1<--------                --------->ZAT14 <---------ICU4            --------->At4g35610<---------ATHB12 -------->At4g35610   <---------ARR11(3)             --------->GLK1(2)       --------->MYB46(3)   --- ---->ANAC58    --------->ZAT18--------->ICU4<<<<<<<ZML2  <---------ZAT2   --------->WOX13(1) ------>ZmHOX2a(2) ---->ANAC58  <---------------AtSPL3      <---------HSFB2a(2) <-----------RAV1(2)           ------->TEIL --->DOF2     <---------------AtSPL8      --------->HSFB2a(2) <---------HSFB2a(2)           <--------   gcatctaaattccaagagagtactgatcttacaataatcaaatactagaacgaagaatcgagctccagaagttgcatcaatcaccagaaaaatggatcta  641800                ----------->GT1                <------MYB46(1)         --------->MYB52(1)         <---------DOF5.7(2)        ----------->HVH21       <---------MYB52(2)      --------->At4g35610      --------->ZAT2   ----------->GT1                            <---------HSFC1(2) >ARR11(3)      <------MYB83              ----------->GT1         --------->HSFB2a(1) >ARR14(2)    <---------MYB52(1)  --------->GLK1(1)               --------->HSFC1(2) -ARR14(2)    <--------P      --------->ANAC58              --------->GLK1(2) ------>YAB1<---------MYB46(3)--------->ANAC58           <---------TOE2(3)    <----------DOF2 -AGP1<---------At4g35610     --------->ANAC46   --------->YAB1   <---------HSFB2a(1)      --------->CCA1(2)   gcacaatcagctaacggttgggaaatagaaacaaggaattcaaatcgataaacagaattaagaatcgaagcttcttagaactttagaaggaagataaaca  641900                                                                              <---------AHL20(2)                                                                         <---------GLK1(2)                                                                      <------NtERF2    --------->LBD16                                                                     ------>NtERF2    <---------ANAC46                                                                 --------->ANAC58     --------->HSFB2a(2)                           <-----------GT1                       --------->ANAC46     <---------HSFB2a(2)             <---------TOE2(3)                  <---------GLK1(1)--------->ANAC58    <---------LBD16 --------->ZAT14     <---------TOE2(3)--------->LBD16  <---------ATERF1(1)   <---------YAB1 <---------ZAT14--------->GLK1(2)    --------->HSFB2a(2)--------->ATERF1(1)*TSS    <-----------GT1 -- <---------ZAT18--------->ICU4       <---------HSFB2a(2)<-----------------------TaNAC69(2)         <-   cagtgaacaatttttgagattatgaggtttttctgtctcccagagagtggaaatcggagacgaccataagccaccgatttttatttttccggagatagat  642000                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                          --------->TOE1(2)                                                                                         --------->HSFB2a(1)                                                                                         <---------HSFB2a(1)                                                             ----------->HVH21           <---------HSFC1(2)                                                          --------->ARR11(3)             --------->HSFC1(2)                                                    --------->YAB1                      --------->SPL7          --------->ARR11(3)                --------->AHL20(2)                          ------->TEIL-          <---------ARR11(3)          ----------->GT1     <---------ARR11(3)        <---------HSFB2a(2) ------->ARR11(3)                  ---------->DOF2  ----------->GT1               --------->PCF5    < --------ARR11(3)       ----------->RAV1(1) <---------AHL20(2)  <---------bZIP60(2) --------->HSFB2a(2)   agatattagaaagatttgtctcgggccaacaaaaaaaaaaaggaaattaaaaaatcgtaatatctgacatggacaaaactagaggtcccgaacgttcgag  642100                 <---------RVE1(1)                --------->ARR14(2)         ---------->DOF2      <-----------TGA1      <-----------HVH21                              --------->ALFIN1     --------->ANAC58                              --------->O2     ===============bZIP_DOF                       <---------O2     --------->ANAC46                              <---------ANAC55(1)     <---------TGA1a                               <---------ANAC46     <---------O2<---------CCA1(1)                 --------->TGA1a     --------->TGA1a                               <---------bZIP60(2)     --------->bZIP60(2)                           <---------TGA1a     --------->O2<----------TaMYB80                <---------ANAC58     --------->ANAC58                           ----------->HVH21   <---------ALFIN1      --------->bZIP60(2)    ----------->TGA1                                <---- -->HSFB2a(2)   <---------ARR14(2)    <---------ANAC58    <------MYB83                    <---------ZAT6 ---HSFB2a(2)   <-----------ARR10     <---------ANAC58    ----------->GT1         =================== ---HSFC1(1)  ----------->GT1  --------->ARR11(3)  <---------ANAC58               =================== -->HSFC1(1)<---------At4g35610<---------AHL20(1) ----------->STF1                <------ZmHOX2a(1) -------->ARR14(2)       --------->ANAC46 <------ZmHOX2a(1)                    <-----------RAV1(2) ---------ARR14(2)  <-----------GT1   <---------ANAC46    <------MYB46(1)  <---------MYB46(3)  <-----   aagttccacgtcagagcggatatttccacatcatatattggcgaggattagtgacgtggatggtatatcaaaaacagtcgttcaggaggctagtggcaga  642200                      --------->ANAC55(2)                      <---------ANAC46                      <---------ANAC55(2)                      <---------TGA1a                      <---------O2                      --------->O2                      <--------ABF1                  <-----------HVH21                 ----------->HVH21        <----------DOF2        ========================bZIP_DOF       ------>ZmHOX2a(2)         --------->MYB55(2)      <------ZmHOX2a(2)          <---------MYB46(3)      <---------RVE1(1)         <---------ANAC46     <---------ARR14(3)------->MYC4                                             --------->ARR11(3)     --------->ARR14(2)<-------MYC4                                             <---------GLK1(2)     --------->ARR14(3)------->MYC3                                             <---------ARR11(3)     --------->ARR11(3)------->MYC2                                           ----------->ARR10     <---------ARR11(3)<-------MYC3     <------ZmHOX2a(1)               <---------MYB52(1)     <---------ARR14(2)<-------MYC2   --------->ANAC58           <---------HSFB2a(2)                <     --------->AGP1   --------->TGA1a --------->ANAC58           --------->HSFB2a(2)                < -----GLK1(2)  --------->At4g35610<------MYB83       ----------->GT1   <-------GAMYB                < =============HOX2a_HOX2a    <---------AtMYB61<-----------HVH21<---------At4g35610       <------NtERF2 ============HOX2a_HOX2a     --------->ICU4  <----------ID1    --------->At4g35610     <---------ANAC46 ----At4g35610 <---------At4g35610<------MYB46(1) <---------O2 ----------->RAV1(2)    <---------LBD16   ttattaagatctttttgaactgacacgtgtaatggtgggtaaggaaaacgtcaagtggtaaactcatctggaccgttgaatagattttggcggaagagac  642300                                                                              --------->AHL20(1)            <---------AHL20(2)                                                <---------ARR11(3)           --------->AHL20(2)                                            --------->YAB1         --------->ARR11(3)        <---------ANAC58              <-----------GT1                    <         <---------ARR11(3)        <---------ANAC58         <---------ARR11(3)<---------AHL20(1)   <x ---------ANAC58           <---------YAB1               ---------->DOF2  --------->AHL20(2)       <xx ---------ANAC58      ----------->GT1              --------->AtLEC2     <---------ATHB12         ---- ---------ANAC46   <---------REM1(1)  <-----------------AGL1--------->ARR11(3)--------->ARR11(3) <---   tagcgtttaaagattttatagatgtagttaatattgggcttaccatatgggccattcaaaaagattttaacccaataaaaaatattcaaaaaactatcgt  642400                          --------->ATERF1(1)                      ------>NtERF2                    --------->ATERF1(1)                   --------->LBD16               --------->TOE1(2)               --------->TOE2(2)                                <xxxxxxxxxxxxxxxsmallRNA(le3)              --------->HSFB2a(1)                              <xxxxxxxxxxxxxxxxsmallRNA(i)              <xxxxxxxxxxxxxxxxsmallRNA(le3)                   <xxxxxxxxxxxxxxxxsmallRNA(s)              <xxxxxxxxxxxxxxxxsmallRNA(s)                    <xxxxxxxxxxxxxxxxxsmallRNA(se3)              ----------->RAV1(2)                             <xxxxxxxxxxxxxxxxxsmallRNA(si3)              <---------HSFB2a(1)                            <xxxxxxxxxxxxxxxxxxsmallRNA(se3)            <xxxxxxxxxxxxxxxxsmallRNA(s)                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxsmallRNA(s)                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxsmallRNA(se3)                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxsmallRNA(s)                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  <---------At4g35610<---------DEAR3(1)                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  --------->At4g35610--------->DEAR3(1)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------ZAT2   <---------LBD16                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------ZAT14 <---------ANAC46                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->ZAT2 <xxxxxxxxxxxxxxxxsmallRNA(s)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      -- <xxxxxxxxxxxxxxxxsmallRNA(s)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   <----- xxxxxxxxxxxxxxxxsmallRNA(i)                          ------>ZmHOX2a(1)         ----------->GT1------ xxxxxxxxxxxxxxxsmallRNA(s) <xxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <----- xxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxsmallRNA(le3)--------->MYB46(3)   *TSS  ---------->DOF2< ----->ETT(2)------->TEIL<---------ATERF1(1)         --------->TOE2(3)  --------->ETT(2)       ------ ------ETT(2)<xxxxxxxxxxxxxxxxsmallRNA(s)            --------->TOE1(3)  <---------ETT(2)  -----------   cgacagcagggttcgaacctgcgcgggcgaagcccaatagatttcaagtctatctccttaaccactcggacatatcgacatctcgttaaaagcacaatta  642500  Previous    Next  AGI:  At5g02810.1    Description:  PRR7 (PSEUDO-RESPONSE REGULATOR 7); transcription regulator. Identical to Two-component response regulator-like APRR7 (APRR7) [Arabidopsis Thaliana] (GB:Q93WK5;GB:Q9LZ04); similar to APRR3 (PSEUDO-RESPONSE REGULATOR 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G60100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21763.1); contains InterPro domain Response regulator receiver; (InterPro:IPR001789); contains InterPro domain CheY-like (InterPro:IPR011006); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 637895    to: 641975    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g02811.1    Description:  unknown protein Range:  from: 642069    to: 642218    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g02815.1    Description:  pre-tRNA. tRNA-Ser (anticodon: TGA) Range:  from: 642398    to: 642479    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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