Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <------MYB83                                                                                <------MYB46(1)                                                                               --------->MYB111(2)                                                                               --------->MYB46(2)                                                                               <---------MYB46(3)                                                                               --------->MYB111(1)                                                                              <--------P                                                                              <---------MYB55(1)                                                                             <---------ANAC58                                                                             <-------GAMYB                                                                             <---------ANAC58                                                                            <---------DEAR3(2)                                                                            <---------MYB46(3)                                                                            <------MYB83                                                                            --------->ATHB12                                                                            <------MYB46(1)                                                                            --------->MYB55(2)                                                                            --------->MYB52(2)                                                                           <---------AtMYB61                                                                           <---------MYB46(3)                                                                        --------->ATHB12     --------                        <---------ANAC58                                <---------MYB46(3)  <-------TEIL         --------->GLK1(1)           --------->GLK1(1)                 <---------YAB1   --------->AHL20(2)         <---------GLK1(1)  <---------YAB1             >>>>>>>>>>>>>>>>>LFY--------->MYB111(1)  <---- ------->YAB1           <---------ANAC58     <-----------GT1<---------ZAT6<--------P<---------YAB1 -----TEIL   --------->HSFB2a(2)----------->GT1   <----------DOF2    <---------AtLEC2--------->YAB1 <   ttcatatttggatttcgagacttggagcttgtgaatgtgaaatctattttcactttggaccagtgttattttcatggttggttggtatcataaattcata  589100                   <-------TEIL                  <-----------HVH21                 ------->MYC2                 ------->MYC3                      <---------AHL20(2)                 <-------MYC2         <------------ATHB5      <---------CCA1(1)               <---------ICU4      <---------RVE1(1)               <--------ATHB1      --------->GLK1(1)               --------->YAB1--------->YAB1     <---------ARR14(2)              --------->ICU4--------->AHL20(2)     --------->ARR14(2)              <---------ATHB51                  <-----------GT1 ->YAB1     <---------At5g28300      <---------ATHB12 <---------YAB1 <-----------HVH21 -----ICU4 <-----------GT1       ----------------->AGL3    <-----------GT1 -----------HVH21<-------MYC3    <-----------------AGL3 <---------AHL20(2)<----------DOF2         <<<   atcgtcggatattttaccacgttcacacagaaaaccccaataatggagactcatttattattttcttcatatgtcactttctatcgccaattgttttttg  589200                                                                                           <------MYB83                                                                                           <---------MYB46(3)                                                                             <---------TOE1(3)                                                                             <---------TOE2(3)                                                                            ---------->DOF2<------MYB46(1)                                                                --------->ANAC58          <---------AtMYB61                                                                --------->ANAC58         <---------MYB52(1)                                                               <---------LBD16          <-------GAMYB   <----------DOF2                                            <---------ANAC46         <-----------RAV1(1) <<<<<<MYB2                                             --------->ATHB12   <---------AHL20(2)   <----   gttttctttgaaaaaatgtctaaatgactaaatccatcgcaaatttcattttagtgaattagtggcacggagaacatttaaagttgattctgttggtttt  589300                                                  <---------WOX13(1)                                     <---------WRKY18(1)                                  <-------GAMYB<---------YAB1                                 <---------MYB46(3)                        --------->ICU4  --------->TOE2(3)                        <---------YAB1  <---------MYB59                                            --                      --------->YAB1--------->WRKY38(1)                                            --       --------->AHL20(2)        --------->MYB52(2)                                                <-       <---------AHL20(2)--------->ATHB12  <---------CCA1(2)                         --------->AHL20(1) -----YAB1            <---------ICU4--------->WRKY12                 ----------->GT1--------->YAB1 <-   gataaacattttattcaaatatactcatgatttgtttgttgacctaaatctgattgttttttgttttcaaatagaaaaacaaacaaaaataatgcttcga  589400       <---------TOE1(3)             <---------TOE2(3)       <---------TOE2(3)             <---------YAB1  --------->ZAT6             ---------->ID1                                             <-------PIF5 --------->ZAT18            <-------GAMYB          --------->CCA1(2)         --------->At4g35610 ------->ZAT14             <---------MYB46(3)     <---------ARR11(3)     --------->ANAC58 ------->ZAT18             --------->MYB52(2)     --------->ARR11(3)     --------->ANAC58 --------ZAT14           <---------ANAC46       <---------TOE2(3)        --------->ANAC46 --------ZAT18      <-----------RAV1(1)--------->ARR11(3)            --------->ZAT6     ------->PIF5   gtggacactaaggtttgatcatgtgttgtttgttgtattaagatagttttaagatatgtctatgtgatataacacaagcagccaaaaccacgagcatagt  589500                         *TSS                         <---------ANAC58                         <---------ANAC58                   ---------->ID1            <---------AHL20(2)           --------->ARR11(3)           <---------ARR11(3)                                        --------->ARR14(2)           --------->AHL20(1)                                        <-----------ARR10           <---------AHL20(1)                                       <---------CCA1(2)           <---------AHL20(2)                                    ------>ZmHOX2a(1)        <---------CCA1(2)           --------->AHL20(2)                             --------->ARR14(2)           ------>MYB46(1)        <---------AHL20(2)                                <---------ARR14(2)           ------>MYB83        --------->AHL20(2)      --------->LBD16           ------->TEIL               --------->AtMYB61        --------->YAB1   <---------ANAC46                <---------CCA1(2)       --------->ETT(2)  ----------->GT1<-----------RAV1(1)         <-----------GT1    --------->TOE2(3)<---------ETT(2)   taagaggtaataatatattttgttgtttcttgtccagagaattcatgttactcttgtctgaatcttcctcaaatctactcatgtagacctccctatctcg  589600                                                             <---------YAB1                                                           <---------ICU4                                                        --------->WOX13(1)                                                 --------->YAB1                                    <-                                           --------->YAB1  --------->YAB1                        <---                                     <---------------AGL15--------->ICU4                        -----                <----------DOF2      --------------->AGL15<---------ATHB12                     ------                <---------DAG2    --------->GLK1(2)   <---------YAB1                          -------         ------>NtERF2           --------->ARR11(3)  --------->TOE2(3)                        -------         --------->LBD16         <---------ARR11(3) <---------ICU4                          <--------        <xxxxxxxxxxxxxxxxsmallRNA(i) <----------DOF2--------->YAB1    <------ZmHOX2a(2)     ---------        --------->ANAC46         <---------GLK1(2) <---------YAB1    --------->ARR11(3)  <---------At4g35610       <---------LBD16         <---------ATHB12  <---------ICU4---------->DOF2    ----------->TGA1---   atctaaatttccgccaaactttttttaatcccaaagattctttaaacagaatcatcatcaatcatgaaagagatcaagaagacgatgacgaagcagatga  589700          --------->TGA2(1)          --------->ANAC58          <---------bZIP60(1)          <---------TGA2(1)          --------->bZIP60(1)   <-------GAMYB       ----------->HVH21    ------------>AtMYB77       ----------->TGA1    <---------TGA1a     ====================================MYC_MYB     <---------O2          --------->ANAC58     <---------ANAC58      --------->ANAC58     ======================MYC_MYB                                                           --------     --------->ANAC55(2)   =============MYC_MYB                                            --------->At4g35610     --------->TGA1a       =========================================bZIP_DOF               <---------ZAT2     <---------TGA1a       --------->O2                                                    <---------At4g35610     <---------ANAC55(2)   --------->TGA1a                                                 --------->ZAT2     ======================MYC_MYB                                                     --------->ALFIN1     <---------ANAC58    --------->ANAC46            <-----------------AGL3          <---------ANAC58     --------->O2   <---------MYB52(1)   ----------->GT1           --------->ATHB12  <---------ANAC58 -----NtERF2       <-------GAMYB--------->At5g28300 <---------HSFB2a(1)              <---------ANAC46 ------bZIP60(1)   ==================MYC_MYB        --------->HSFB2a(1)             <------NtERF2 ---->RAP2.6(3)    <-----------HVH21<---------HSFB2a(2)  <----------DOF2          <---------DEAR3(1) --->MYB52(1)  --------->ANAC46--------->MYB55(2)   --------->HSFC1(2)           --------->RAP2.6(3) ---->TGA1--------->ANAC58 --------->ANAC46         <---------HSFC1(2)         --------->ANAC46------ ---->HVH21    --------->ANAC58<---------MYB46(3)  ------->TEIL   <---------YAB1--------->MYB52(1) -At4g35610    --------->ANAC58<---------DEAR3(2)  --------->ARR14(2)          ----------->HVH21 >At4g35610  <---------ALFIN1 <---------DEAR3(1)   <---------ARR14(2) ------>ZmHOX2a(2)<------NtERF2 --->NtERF2 <---------REM1(2) <---------ANAC46--------->MYB52(1)<---------At4g35610------>NtERF2   cggcaagacgtgacgacacgccgttacacacggcggttagagaaggcaaaacggaccttcttttggagatgatcggagaacacgacggcgtggagctgaa  589800                                                            --------->ARR14(2)                                                           <-------GAMYB                                                           --------->At5g28300                                                          ----------->GT1                                                       ------------>MYB.PH3(1)                                                 <---------At4g35610            --------->GLK1(2)                                                 --------->At4g35610           --------->ARR11(3)                                                 <---------ZAT2                <---------GLK1(2)                                                <---------RAP2.3(1)          <---------TOE1(3)                                               <---------RRTF1(2)            <---------YAB1                                    --------------------->WRI1               <---------TOE2(3)                         --------->At4g35610   <---------RAP2.3(2) <---------DDF1                         --------->LBD16       <---------ANAC58   --------->DEAR3(1)--------->At4g35610                         ----------->GT1       <---------RAP2.6(2)--------->DEAR4(1)<---------At4g35610                       <---------ZAT14         <---------ANAC58   --------->At1g77200           --------->ANAC58         <----------DOF2 <---------------AtSPL3   ----------->ARR10  <---------MYB46(3) <-----------HVH21         <---------ANAC46   --------->DREB2C(2) --->HVH21 --------->ANAC58----------->HVH21  <---------LBD16    --------->DEAR3(2)<---------YAB1---- ---->DOF2<------NtERF2--------->ZAT14   ------->TEIL <---------SPL7    ----------->GT1    <---------ALFIN1   agagttgttggccgagcaaaaccagtccggtgaaacggctttgtacgttgcggctgagtacggttacaccgacatggttaagattctgatgaaacactcc  589900                                                              --------->ANAC58                                                        --------------->AGL15                                                        <---------------AGL15                                                       ----------------->AGL2                                                       ----------------->AGL3                                                       ----------------->AGL1                                                       <-----------------AGL1                                                       <-----------------AG                                                       <------NtERF2                                                      ------>NtERF2                                                      --------->LBD16                                                     --------->RAP2.6(2)                                                     --------->ATERF1(2)                                                     --------->RAP2.3(2)                                                     --------->DEAR3(1)                                                     <---------ATERF1(2)                                                     --------->ANAC46                    --------->ANAC58                 --------->RRTF1(2)      <-------GAMYB                    --------->ANAC58                 --------->RAP2.3(3)     --------->At4g35610                  ---------->DOF2                    --------->RRTF1(3)      <---------At4g35610                 --------->AtMYB61                   --------->DREB2C(2)    --------->MYB52(2)                --------->MYB46(3)                  --------->RAP2.3(1) --------->ANAC55(2)              --------->ARR14(2)                    --------->ERF1<---------GLK1(1)              <---------ARR14(2)           <-----------HVH21  --------->ANAC58 --------->WRKY38(1)             <------NtERF2                <----------DOF2   --------->MYB52(1) --------->WRKY12            --------->LBD16 --------->RAP2.6(3)    <---------ATERF1(1)  --------->O2           --------->ANAC46--------->MYB52(1)     --------->DEAR3(1) --------->TOE2(2)             <-           --------->RAP2.6(2)         ------>NtERF2--------->ORA47(2)  --------->ANAC46     -------- -->NtERF2<---------LBD16  --------->ARR14(2)  --------->ANAC46   --------->GLK1(1)   <---------GLK1(2)   gactctgtcttagccggaaccaaagccaagaacggcttcgatgcctttcacatcgccgccaaaaacggaaatctacgtgagttgacttgattctcaaaag  590000  Previous    Next  AGI:  At5g02620.1    Description:  ankyrin repeat family protein. Identical to Ankyrin repeat-containing protein At5g02620 [Arabidopsis Thaliana] (GB:Q6AWW5;GB:Q0WWU3;GB:Q9LZ40); similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G07710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18083.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 589525    to: 591675    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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